Miyakogusa Predicted Gene

Lj1g3v2839210.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2839210.2 Non Chatacterized Hit- tr|C0HG02|C0HG02_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,58.9,9e-19,PROKAR_LIPOPROTEIN,NULL; seg,NULL,CUFF.29603.2
         (245 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g38420.3                                                       322   3e-88
Glyma09g38420.1                                                       321   6e-88
Glyma18g47920.1                                                       317   9e-87
Glyma09g38420.2                                                       302   3e-82
Glyma09g38420.4                                                       232   3e-61

>Glyma09g38420.3 
          Length = 253

 Score =  322 bits (824), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 151/177 (85%), Positives = 161/177 (90%)

Query: 69  KIQFILQHAFGDSDFTDAGNFSARLKTWSHGAQTLTKLRFTRDTFTDVEKNKFQELLQGD 128
           KI F LQHAFGDSDF+DAGNFSARLKTWSHGAQTLTKLRF RD  TDVE+ KFQELLQGD
Sbjct: 67  KIHFPLQHAFGDSDFSDAGNFSARLKTWSHGAQTLTKLRFKRDPLTDVEQKKFQELLQGD 126

Query: 129 DFYKIRLPSNVLSPPGRDYIVSSVKARCLPGDGLEEHFVIHTEGVNILAVNYGAHGACPY 188
           DFY IRLPSNVLSPPGR+YI+SSVKARCLPGDGLEEHFVI  EGVN+LAV+YGA GACPY
Sbjct: 127 DFYTIRLPSNVLSPPGREYIISSVKARCLPGDGLEEHFVIQMEGVNVLAVSYGAPGACPY 186

Query: 189 PRQLKLPAKWSFKSHTVLKNSEQAPRTPIFAEEVLGGEGIDGETIKPIERSFWAKYV 245
           PR LKLPAKWSFKSHTVLK+SEQAPR PIFAEE LGG+  DGE ++PIERSFWAKYV
Sbjct: 187 PRHLKLPAKWSFKSHTVLKSSEQAPRAPIFAEEALGGQEGDGEAVQPIERSFWAKYV 243


>Glyma09g38420.1 
          Length = 296

 Score =  321 bits (822), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 150/176 (85%), Positives = 160/176 (90%)

Query: 69  KIQFILQHAFGDSDFTDAGNFSARLKTWSHGAQTLTKLRFTRDTFTDVEKNKFQELLQGD 128
           KI F LQHAFGDSDF+DAGNFSARLKTWSHGAQTLTKLRF RD  TDVE+ KFQELLQGD
Sbjct: 67  KIHFPLQHAFGDSDFSDAGNFSARLKTWSHGAQTLTKLRFKRDPLTDVEQKKFQELLQGD 126

Query: 129 DFYKIRLPSNVLSPPGRDYIVSSVKARCLPGDGLEEHFVIHTEGVNILAVNYGAHGACPY 188
           DFY IRLPSNVLSPPGR+YI+SSVKARCLPGDGLEEHFVI  EGVN+LAV+YGA GACPY
Sbjct: 127 DFYTIRLPSNVLSPPGREYIISSVKARCLPGDGLEEHFVIQMEGVNVLAVSYGAPGACPY 186

Query: 189 PRQLKLPAKWSFKSHTVLKNSEQAPRTPIFAEEVLGGEGIDGETIKPIERSFWAKY 244
           PR LKLPAKWSFKSHTVLK+SEQAPR PIFAEE LGG+  DGE ++PIERSFWAKY
Sbjct: 187 PRHLKLPAKWSFKSHTVLKSSEQAPRAPIFAEEALGGQEGDGEAVQPIERSFWAKY 242


>Glyma18g47920.1 
          Length = 297

 Score =  317 bits (811), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 148/176 (84%), Positives = 159/176 (90%)

Query: 69  KIQFILQHAFGDSDFTDAGNFSARLKTWSHGAQTLTKLRFTRDTFTDVEKNKFQELLQGD 128
           KIQF LQHAFGDSDF+DAGNFSARLKTWSHGAQTLTKLRF RD  TDVE+ KF+ELL+ D
Sbjct: 68  KIQFPLQHAFGDSDFSDAGNFSARLKTWSHGAQTLTKLRFKRDLLTDVEQRKFKELLRED 127

Query: 129 DFYKIRLPSNVLSPPGRDYIVSSVKARCLPGDGLEEHFVIHTEGVNILAVNYGAHGACPY 188
           DFY+IRLPSNVLSPPGR+YI+SSVKARCLPGDGLEEHFVI  EGVNILAV+YGA GACPY
Sbjct: 128 DFYRIRLPSNVLSPPGREYIISSVKARCLPGDGLEEHFVIQMEGVNILAVSYGAPGACPY 187

Query: 189 PRQLKLPAKWSFKSHTVLKNSEQAPRTPIFAEEVLGGEGIDGETIKPIERSFWAKY 244
           PRQLKLP KWSFKSHTVLK+SEQAPR PIF EE LGG   DGE ++PIERSFWAKY
Sbjct: 188 PRQLKLPGKWSFKSHTVLKSSEQAPRAPIFTEEALGGLEGDGEAVQPIERSFWAKY 243


>Glyma09g38420.2 
          Length = 286

 Score =  302 bits (773), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 144/176 (81%), Positives = 153/176 (86%), Gaps = 10/176 (5%)

Query: 69  KIQFILQHAFGDSDFTDAGNFSARLKTWSHGAQTLTKLRFTRDTFTDVEKNKFQELLQGD 128
           KI F LQHAFGDSDF+DAGNFSARLKTWSHGAQTLTKLRF RD  TDVE+ KFQELLQGD
Sbjct: 67  KIHFPLQHAFGDSDFSDAGNFSARLKTWSHGAQTLTKLRFKRDPLTDVEQKKFQELLQGD 126

Query: 129 DFYKIRLPSNVLSPPGRDYIVSSVKARCLPGDGLEEHFVIHTEGVNILAVNYGAHGACPY 188
           DFY IRLPSNVLSPPGR+YI+SSVKARCLPGDGLEEHFVI  EGVN+LAV+YGA GACPY
Sbjct: 127 DFYTIRLPSNVLSPPGREYIISSVKARCLPGDGLEEHFVIQMEGVNVLAVSYGAPGACPY 186

Query: 189 PRQLKLPAKWSFKSHTVLKNSEQAPRTPIFAEEVLGGEGIDGETIKPIERSFWAKY 244
           PR LKLPAKWSFKSHTVLK+SEQAPR PIFAE          E ++PIERSFWAKY
Sbjct: 187 PRHLKLPAKWSFKSHTVLKSSEQAPRAPIFAE----------EAVQPIERSFWAKY 232


>Glyma09g38420.4 
          Length = 197

 Score =  232 bits (592), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 109/126 (86%), Positives = 115/126 (91%)

Query: 69  KIQFILQHAFGDSDFTDAGNFSARLKTWSHGAQTLTKLRFTRDTFTDVEKNKFQELLQGD 128
           KI F LQHAFGDSDF+DAGNFSARLKTWSHGAQTLTKLRF RD  TDVE+ KFQELLQGD
Sbjct: 67  KIHFPLQHAFGDSDFSDAGNFSARLKTWSHGAQTLTKLRFKRDPLTDVEQKKFQELLQGD 126

Query: 129 DFYKIRLPSNVLSPPGRDYIVSSVKARCLPGDGLEEHFVIHTEGVNILAVNYGAHGACPY 188
           DFY IRLPSNVLSPPGR+YI+SSVKARCLPGDGLEEHFVI  EGVN+LAV+YGA GACPY
Sbjct: 127 DFYTIRLPSNVLSPPGREYIISSVKARCLPGDGLEEHFVIQMEGVNVLAVSYGAPGACPY 186

Query: 189 PRQLKL 194
           PR LKL
Sbjct: 187 PRHLKL 192