Miyakogusa Predicted Gene

Lj1g3v2838160.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2838160.1 Non Chatacterized Hit- tr|D8TQZ1|D8TQZ1_VOLCA
Putative uncharacterized protein OS=Volvox carteri
GN=,52.05,4e-17,FAMILY NOT NAMED,NULL;
PspA_IM30,PspA/IM30,CUFF.29584.1
         (155 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g47890.1                                                       239   9e-64
Glyma11g13300.1                                                       147   4e-36
Glyma12g05330.1                                                       146   7e-36
Glyma12g05330.2                                                       106   1e-23

>Glyma18g47890.1 
          Length = 322

 Score =  239 bits (610), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 112/138 (81%), Positives = 122/138 (88%), Gaps = 2/138 (1%)

Query: 1   MALSMKATPLTGSCFVSNSIRPSTHPPFKSSFLHYGGRALEVPGIRVSYSNRLKCQCHGG 60
           MA++MKATP+T S FVS   R ST PPFKSSFL Y   ALEVPG+RV+YS+RLKC CHGG
Sbjct: 1   MAIAMKATPITASGFVS--TRNSTLPPFKSSFLRYRAGALEVPGMRVTYSDRLKCNCHGG 58

Query: 61  GGLGAHMNIFSRFARVIKSYANAIISSFEDPEKILEQAVLDMNNDLVKVRQATAQVLASQ 120
           G LG  MN+FSRFARVIKSYANAIISSFEDPEKILEQAVLDMNNDL+KVRQATAQVLASQ
Sbjct: 59  GALGTQMNLFSRFARVIKSYANAIISSFEDPEKILEQAVLDMNNDLIKVRQATAQVLASQ 118

Query: 121 KQLESKYTAIQKASDDWY 138
           KQLESKY +I+KASDDWY
Sbjct: 119 KQLESKYKSIEKASDDWY 136


>Glyma11g13300.1 
          Length = 322

 Score =  147 bits (371), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 71/112 (63%), Positives = 88/112 (78%), Gaps = 5/112 (4%)

Query: 27  PFKSSFLHYGGRALEVPGIRVSYSNRLKCQCHGGGGLGAHMNIFSRFARVIKSYANAIIS 86
           P  +SF  +G   +EV  +RV    R+     GGG LGA MN+F RFARV+KSYANA++S
Sbjct: 29  PLTTSF--FGTARVEVLKLRVM---RIAKPARGGGALGARMNLFDRFARVVKSYANAVLS 83

Query: 87  SFEDPEKILEQAVLDMNNDLVKVRQATAQVLASQKQLESKYTAIQKASDDWY 138
           SFEDPEKILEQAVL+MN+DL K+RQATAQVLASQK+LE+KY A Q+AS++WY
Sbjct: 84  SFEDPEKILEQAVLEMNDDLTKMRQATAQVLASQKRLENKYKAAQQASEEWY 135


>Glyma12g05330.1 
          Length = 323

 Score =  146 bits (369), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 71/112 (63%), Positives = 88/112 (78%), Gaps = 5/112 (4%)

Query: 27  PFKSSFLHYGGRALEVPGIRVSYSNRLKCQCHGGGGLGAHMNIFSRFARVIKSYANAIIS 86
           P  +SF  +G   +EV  +RV    R+     GGG LGA MN+F RFARV+KSYANA++S
Sbjct: 30  PLTTSF--FGTARVEVLKLRVM---RIVKPTRGGGALGARMNLFDRFARVVKSYANAVLS 84

Query: 87  SFEDPEKILEQAVLDMNNDLVKVRQATAQVLASQKQLESKYTAIQKASDDWY 138
           SFEDPEKILEQAVL+MN+DL K+RQATAQVLASQK+LE+KY A Q+AS++WY
Sbjct: 85  SFEDPEKILEQAVLEMNDDLTKMRQATAQVLASQKRLENKYKAAQQASEEWY 136


>Glyma12g05330.2 
          Length = 249

 Score =  106 bits (265), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 47/62 (75%), Positives = 59/62 (95%)

Query: 77  IKSYANAIISSFEDPEKILEQAVLDMNNDLVKVRQATAQVLASQKQLESKYTAIQKASDD 136
           ++SYANA++SSFEDPEKILEQAVL+MN+DL K+RQATAQVLASQK+LE+KY A Q+AS++
Sbjct: 1   MQSYANAVLSSFEDPEKILEQAVLEMNDDLTKMRQATAQVLASQKRLENKYKAAQQASEE 60

Query: 137 WY 138
           WY
Sbjct: 61  WY 62