Miyakogusa Predicted Gene

Lj1g3v2835980.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2835980.1 Non Chatacterized Hit- tr|I1N3Z5|I1N3Z5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.49977
PE,82.87,0,eubact_ribD: riboflavin biosynthesis protein
RibD,Riboflavin biosynthesis protein RibD; ribD_Cterm: ,CUFF.29568.1
         (590 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g47790.1                                                      1006   0.0  
Glyma09g38520.1                                                       920   0.0  
Glyma03g01270.1                                                       104   3e-22
Glyma12g10050.1                                                        90   9e-18
Glyma14g01180.1                                                        80   5e-15
Glyma08g44160.1                                                        76   1e-13
Glyma07g07810.1                                                        52   2e-06

>Glyma18g47790.1 
          Length = 594

 Score = 1006 bits (2601), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 480/578 (83%), Positives = 528/578 (91%), Gaps = 5/578 (0%)

Query: 2   MALSCFTPIIAKPPSSIICK--CTKPSTNHALDAAYIKRAALIADKSAGFTAPHPNFGCV 59
           MALSC T  +   PSSIICK   + P+  HALDA YI+RAA +ADKSAGFT+PHPNFGCV
Sbjct: 1   MALSCLT--LTANPSSIICKFKASLPTAPHALDATYIRRAAHLADKSAGFTSPHPNFGCV 58

Query: 60  IATPSGDVAGEGYLYAEGTTPAEVQAVTAAGERCRGATAYLNMEPGDCHADSAAVSALLQ 119
           I +PSG VAGEGYLYA+GT  AEVQAV AAGE CRGATAYLNMEPGDCH D +AVSALLQ
Sbjct: 59  IVSPSGKVAGEGYLYAQGTAAAEVQAVKAAGELCRGATAYLNMEPGDCHGDHSAVSALLQ 118

Query: 120 GGVKRVVIGMRHPLQHHRGNAVRALRGEGLQVDLLGEDLTSKLVEDAQKECLLVNAPLIC 179
           GGVKRVV+GMRHPLQH RGNAVRALR +GL VDLLGEDLTS L+EDAQKECLLVNAPLIC
Sbjct: 119 GGVKRVVVGMRHPLQHLRGNAVRALRNQGLHVDLLGEDLTSNLIEDAQKECLLVNAPLIC 178

Query: 180 RATSRIPFSVLKYAMTLDGKIAASSGHASWISSKESRNLVFDLRGRSDAVIVGGNTVRKD 239
           RA  R+PFSVLKYAMTLDGKIAA++GHASWIS K+SRNLVF+LRGRSDAVIVGGNTVR+D
Sbjct: 179 RAALRVPFSVLKYAMTLDGKIAATTGHASWISCKQSRNLVFELRGRSDAVIVGGNTVRRD 238

Query: 240 NPRLTVRHGGGRMPVRIVMSQTLNLPDEAHLWDTSEVSTMVVTQRGARRSFQKLLASKGV 299
           NPRLT RHGGG MP+RIVM+QTL+LP++A+LWD SEVST+VVTQRGARRSFQKLLASKGV
Sbjct: 239 NPRLTARHGGGHMPMRIVMTQTLDLPEKANLWDMSEVSTIVVTQRGARRSFQKLLASKGV 298

Query: 300 EVVEFDMLNSQDVMEYFHDRGYLSILWECGGTLAASAISSGVIHKVFAFIAPKIIGGKNA 359
           EVVEFD+LN+++VMEYFHDRGYLSILWECGGTLAASAISSGVIHKV+AF+APKIIGGKNA
Sbjct: 299 EVVEFDILNAREVMEYFHDRGYLSILWECGGTLAASAISSGVIHKVYAFVAPKIIGGKNA 358

Query: 360 PSPVGELGMVEMSQALNLIDVRYEQVGPDMLVSGFLQPLPDMVPVIPSLEETFVVDPTIS 419
           PSPVG+LGMVEMSQALNLIDV YEQVGPDML+SGFLQPLPDMVPVIPS +ETFV DPT+S
Sbjct: 359 PSPVGDLGMVEMSQALNLIDVCYEQVGPDMLISGFLQPLPDMVPVIPSPDETFVADPTVS 418

Query: 420 RYESSIIFFYKTWDPYGAFSNFSPHAIQMPDENGDYVTWSSVEHFYQAHKFVGADDACA- 478
            Y+S IIFFYKTWDPYGAFSNFSPH IQMPDENGDYVTW SVEH+YQAHKF+G DD  A 
Sbjct: 419 PYDSRIIFFYKTWDPYGAFSNFSPHPIQMPDENGDYVTWMSVEHYYQAHKFIGVDDPLAQ 478

Query: 479 DCVERIKSAKSPEEAAKIGRSMQRKRPDLVRPGWDNMKIDVMYRALKCKFSMYPHLKSML 538
           DCVE IKSAKSPEEAA+IGRSMQ+++P L+R  WDN+KIDVMYRALKCKFS+YPHL SML
Sbjct: 479 DCVEMIKSAKSPEEAARIGRSMQKQKPYLIRSDWDNIKIDVMYRALKCKFSIYPHLNSML 538

Query: 539 LATAGCVLVEASPHDLFWGGGRQGDGLNYLGQLLMKLR 576
           L+TAG VLVEASPHDLFWGGGR G+GLNYLG+LLMKLR
Sbjct: 539 LSTAGSVLVEASPHDLFWGGGRDGEGLNYLGRLLMKLR 576


>Glyma09g38520.1 
          Length = 564

 Score =  920 bits (2377), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 449/578 (77%), Positives = 496/578 (85%), Gaps = 35/578 (6%)

Query: 2   MALSCFTPIIAKPPSSIICKC--TKPSTNHALDAAYIKRAALIADKSAGFTAPHPNFGCV 59
           MALSC T  +   PSS+ICKC  + P+  HALDA YI+RAA +ADKSAGFT+PHPNFGCV
Sbjct: 1   MALSCLT--LTANPSSVICKCKVSLPTAPHALDATYIRRAAHLADKSAGFTSPHPNFGCV 58

Query: 60  IATPSGDVAGEGYLYAEGTTPAEVQAVTAAGERCRGATAYLNMEPGDCHADSAAVSALLQ 119
           I +PSG V+GEGYLYA+GTT AEVQAV +A E CRGATAYLN+EP DCH D +AVSALLQ
Sbjct: 59  IVSPSGKVSGEGYLYAQGTTAAEVQAVASAAELCRGATAYLNLEPSDCHGDHSAVSALLQ 118

Query: 120 GGVKRVVIGMRHPLQHHRGNAVRALRGEGLQVDLLGEDLTSKLVEDAQKECLLVNAPLIC 179
           GGVKRVVIGMRHPLQH RGNAVRALR +GL VDLLGEDLTS L+EDAQKECLLVNAPLIC
Sbjct: 119 GGVKRVVIGMRHPLQHLRGNAVRALRNQGLHVDLLGEDLTSNLIEDAQKECLLVNAPLIC 178

Query: 180 RATSRIPFSVLKYAMTLDGKIAASSGHASWISSKESRNLVFDLRGRSDAVIVGGNTVRKD 239
           RA+ R+PFSVLKYAMTLDGKIAA++GHASWIS K+SRNLVF+LRGRSDAVIVGGNTVR+D
Sbjct: 179 RASLRVPFSVLKYAMTLDGKIAATTGHASWISCKQSRNLVFELRGRSDAVIVGGNTVRRD 238

Query: 240 NPRLTVRHGGGRMPVRIVMSQTLNLPDEAHLWDTSEVSTMVVTQRGARRSFQKLLASKGV 299
           NPRLT RHGGG MP+RIVM+QTL+LP+EA+LWD SEVST+VVTQRGARRSFQKLLASKGV
Sbjct: 239 NPRLTARHGGGHMPMRIVMTQTLDLPEEANLWDMSEVSTIVVTQRGARRSFQKLLASKGV 298

Query: 300 EVVEFDMLNSQDVMEYFHDRGYLSILWECGGTLAASAISSGVIHKVFAFIAPKIIGGKNA 359
           EVVEFD+LN ++VMEYFHD GYLSILWECGGTLAASAISSGVIHKV+AF+APKIIGGKNA
Sbjct: 299 EVVEFDILNPREVMEYFHDCGYLSILWECGGTLAASAISSGVIHKVYAFVAPKIIGGKNA 358

Query: 360 PSPVGELGMVEMSQALNLIDVRYEQVGPDMLVSGFLQPLPDMVPVIPSLEETFVVDPTIS 419
           PSPVG+LGMV MSQALNLIDV YEQVGPDML+SGFLQPLPDMVPVIPSL ETFVVDPT+S
Sbjct: 359 PSPVGDLGMVAMSQALNLIDVCYEQVGPDMLISGFLQPLPDMVPVIPSLNETFVVDPTVS 418

Query: 420 RYESSIIFFYKTWDPYGAFSNFSPHAIQMPDENGDYVTWSSVEHFYQAHKFVGADDACA- 478
            YES IIFFYKTWDPYGA                              HKF+  DD  A 
Sbjct: 419 PYESRIIFFYKTWDPYGA------------------------------HKFIRVDDPLAQ 448

Query: 479 DCVERIKSAKSPEEAAKIGRSMQRKRPDLVRPGWDNMKIDVMYRALKCKFSMYPHLKSML 538
           DCVERIKSA SPEEAA+IGRSMQ+++P L+R  WDN+KIDVMYRALKCKFS+YP L SML
Sbjct: 449 DCVERIKSAISPEEAARIGRSMQKQKPYLIRSDWDNIKIDVMYRALKCKFSIYPQLNSML 508

Query: 539 LATAGCVLVEASPHDLFWGGGRQGDGLNYLGQLLMKLR 576
           L+TAG VLVEASPHDLFWG GR G+GLNYLG+LLMKLR
Sbjct: 509 LSTAGSVLVEASPHDLFWGRGRDGEGLNYLGKLLMKLR 546


>Glyma03g01270.1 
          Length = 425

 Score =  104 bits (259), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 98/377 (25%), Positives = 173/377 (45%), Gaps = 28/377 (7%)

Query: 28  NHALDAAYIKRAALIADKSAGFTAPHPNFGCVIATPSGDVAGEGYLYAEGTTPAEVQAVT 87
           N   D  YI+R   +A K+ GFT+P+P  GCVI    G V GEG+    G   AEV A+ 
Sbjct: 68  NDDDDGFYIRRCVELARKAVGFTSPNPLVGCVIVK-DGKVVGEGFHPKAGQPHAEVFALR 126

Query: 88  AAGERCRGATAYLNMEPGDCHADSAAVS-ALLQGGVKRVVIGMRHPLQHHRGNAVRALRG 146
            AG+  + ATAY+++EP +    +   + AL++  VK+VV+GM  P        V  LR 
Sbjct: 127 DAGDLAQSATAYVSLEPCNHFGRTPPCTEALIKAKVKKVVVGMVDPNPIVAFKGVERLRD 186

Query: 147 EGLQVDLLGEDLTSKLVEDAQKECLLVNAPLICRATSRIPFSVLKYAMTLDGKIAASSGH 206
            G++V          +V   ++ C  +N P I R  +  PF  L+Y+++++G      G+
Sbjct: 187 AGIEV----------IVGVEEELCKSLNEPYIHRMLTGKPFLTLRYSLSVNGNFLDLLGN 236

Query: 207 A-SWISSKESRNLVFDLRGRSDAVIVGGNTVRKDNPRLTVRHGGGRMPVRIVMSQTLNLP 265
             +      SR     L    DAV++  +   ++      +  G   P+RI++ +     
Sbjct: 237 GVTDCGGYHSR-----LLQEYDAVVISSSLFSENLSVPASQEPGANQPIRIIIHKDPGSS 291

Query: 266 DEAHLWDTSEVSTMVVTQRGARRSFQKLLASKGVEVVEFDMLNSQDVMEYFHDRGYLSIL 325
            +  L   + V+  V+     +      +A +G+E+V  D +N   +++Y + +G  S+L
Sbjct: 292 KQIQLA-INGVTGKVIIFTDNKTVTAPEVAQQGIEIVVLDQINLDVILDYCNCQGLCSVL 350

Query: 326 WECGGT------LAASAISSGVIHKVFAFIAPKIIGGKNAPSPVGELGMVEMSQALNLID 379
            +  G+      L    I    I+K    I P +  G   P P+  L   E  Q L +++
Sbjct: 351 LDIRGSFGEFEELVKEGIKKNYINKFVTEILP-VWDGLAEPDPLQTLKSSE--QGLKVVN 407

Query: 380 VRYEQVGPDMLVSGFLQ 396
           ++       +++ G+ +
Sbjct: 408 LKSMASDQSVVIEGYFK 424


>Glyma12g10050.1 
          Length = 127

 Score = 89.7 bits (221), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 46/77 (59%), Positives = 51/77 (66%), Gaps = 3/77 (3%)

Query: 59  VIATPSGDVAGEGYLYAEGTTPAEVQAVTAAGERCRGATAYLNMEPGDCHADSAAVSALL 118
           VI + S  V G+GYLY+ G T  EVQAV  A +  RGATAYLNME  DCH D + VS LL
Sbjct: 2   VIVSLSDKVTGKGYLYSPGITATEVQAVNTANKLYRGATAYLNMELNDCHGDHSTVSTLL 61

Query: 119 QG---GVKRVVIGMRHP 132
                 VKRVVIGMRHP
Sbjct: 62  HALVCRVKRVVIGMRHP 78


>Glyma14g01180.1 
          Length = 71

 Score = 80.5 bits (197), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 40/69 (57%), Positives = 46/69 (66%), Gaps = 5/69 (7%)

Query: 70  EGYLYAEGTTPAEVQAVTAAGERCRGATAYLNMEPGDCHADSAAVSALLQ-----GGVKR 124
           + YLYA+GT   EVQ V    + CRG TAYLNM+P  C+ D   VSALL      GGVKR
Sbjct: 3   KSYLYAQGTNAVEVQVVNIVDKFCRGTTAYLNMKPNGCNDDHNVVSALLCSILCFGGVKR 62

Query: 125 VVIGMRHPL 133
           VVIG+RHPL
Sbjct: 63  VVIGIRHPL 71


>Glyma08g44160.1 
          Length = 62

 Score = 75.9 bits (185), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/59 (61%), Positives = 39/59 (66%)

Query: 52  PHPNFGCVIATPSGDVAGEGYLYAEGTTPAEVQAVTAAGERCRGATAYLNMEPGDCHAD 110
           P PNF  VI +P   V GEGYLYA+GTT AEVQ V    E C GATA L ME  DCH+D
Sbjct: 1   PTPNFRYVIVSPFDKVFGEGYLYAQGTTAAEVQVVNTVDELCGGATANLKMELSDCHSD 59


>Glyma07g07810.1 
          Length = 257

 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/234 (20%), Positives = 101/234 (43%), Gaps = 16/234 (6%)

Query: 170 CLLVNAPLICRATSRIPFSVLKYAMTLDGKIAASSGH-ASWISSKESRNLVFDLRGRSDA 228
           C  +N P I R  +  PF  L+Y+++++G      G   +      SR     L    DA
Sbjct: 32  CKSLNEPYIHRMLTGKPFLTLRYSLSVNGNFMDLLGDGVTDCGGYYSR-----LLQEYDA 86

Query: 229 VIVGGNTVRKDNPRLTVRHGGGRMPVRIVMSQTLNLPDEAHLWDTSEVSTMVVTQRGARR 288
           V++  +   ++      +  G   P+RI++ +  +  ++  L   + V+  V+     + 
Sbjct: 87  VVISSSLFSENLSVPASQEPGANQPIRIILHKDPSSSNQIPLA-INGVTHKVIIFTDNKT 145

Query: 289 SFQKLLASKGVEVVEFDMLNSQDVMEYFHDRGYLSILWECGGT------LAASAISSGVI 342
                +A +G+E V  D +N   +++Y + +G  S+L +  G+      L    I    I
Sbjct: 146 VTAPEVAQQGIETVALDQINLDVILDYCNRQGLCSVLLDIRGSFGEFEDLVKEGIKKNYI 205

Query: 343 HKVFAFIAPKIIGGKNAPSPVGELGMVEMSQALNLIDVRYEQVGPDMLVSGFLQ 396
           +K    I P +  G   P P+  L  +E  Q   +++++ +     +++ G+ +
Sbjct: 206 NKFVTEILP-VWNGHTEPDPLHTLKSLE--QGAEVVNLKSKASDKSVVIEGYFK 256