Miyakogusa Predicted Gene
- Lj1g3v2811590.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2811590.1 Non Chatacterized Hit- tr|G1U5U2|G1U5U2_RABIT
Uncharacterized protein OS=Oryctolagus cuniculus
GN=IP,33.18,8e-19,RVT_2,Reverse transcriptase, RNA-dependent DNA
polymerase; IMPORTIN 11 (IMP11) (RAN-BINDING PROTEIN ,gene.g33630.t1.1
(306 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma07g18530.1 286 2e-77
Glyma18g43420.1 285 6e-77
Glyma16g19490.1 269 3e-72
Glyma10g10160.1 69 6e-12
Glyma07g37310.2 69 7e-12
Glyma07g18520.1 67 2e-11
Glyma16g13610.1 67 2e-11
Glyma17g31360.1 67 3e-11
Glyma19g27810.1 51 1e-06
Glyma01g29330.1 49 6e-06
>Glyma07g18530.1
Length = 969
Score = 286 bits (732), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 143/208 (68%), Positives = 152/208 (73%), Gaps = 1/208 (0%)
Query: 49 HAFSAQDYVALGLVFCF-FSKITDPEPYLLSFEQFLIQCMVMIKNILECKEYKPTLTGRV 107
H +S D L V F ++ITDP+PYLLSFEQFLIQCMVMIKNILECKEYKP+LTGRV
Sbjct: 231 HPYSFGDKFVLSSVLDFCLNRITDPDPYLLSFEQFLIQCMVMIKNILECKEYKPSLTGRV 290
Query: 108 MDENGVTLEQIKKNIXXXXXXXXXXXXPNERIVLLCNVLIQRYFVLTASDLEEWYRNPES 167
MDENGVTLE +KKNI P ERIV LCNVLI RYFVLTASDLEEWYRNPES
Sbjct: 291 MDENGVTLELMKKNISSAVGGVLTSLLPTERIVHLCNVLISRYFVLTASDLEEWYRNPES 350
Query: 168 FHHEQDMVQWTEKLRPCAEALYIVLFENYSQLLCPVVGSILQEAMKSCPTSVTENTPXXX 227
FHHEQDMVQWTEKLRPCAEALYIVLFE SQLL PVV S+LQE+M +CPTSV E TP
Sbjct: 351 FHHEQDMVQWTEKLRPCAEALYIVLFETNSQLLGPVVVSLLQESMNNCPTSVAEITPALL 410
Query: 228 XXXXXXXXXXXXXXXXSNYLSFKDWPQG 255
SNYLSFKDW G
Sbjct: 411 LKDAAYGATAYVYYELSNYLSFKDWFNG 438
>Glyma18g43420.1
Length = 808
Score = 285 bits (728), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 144/208 (69%), Positives = 152/208 (73%), Gaps = 1/208 (0%)
Query: 49 HAFSAQDYVALGLVFCF-FSKITDPEPYLLSFEQFLIQCMVMIKNILECKEYKPTLTGRV 107
H +S D L V F ++ITDPEPYLLSFEQFLIQCMVMIKNILECKEYKP+LTGRV
Sbjct: 231 HPYSFGDKFVLSSVLDFCLNRITDPEPYLLSFEQFLIQCMVMIKNILECKEYKPSLTGRV 290
Query: 108 MDENGVTLEQIKKNIXXXXXXXXXXXXPNERIVLLCNVLIQRYFVLTASDLEEWYRNPES 167
MDENGVTLE +KKNI P ERIV LCNVLI RYFVLTASDLEEWYRNPES
Sbjct: 291 MDENGVTLELMKKNISSAVGGVLTSLLPTERIVHLCNVLISRYFVLTASDLEEWYRNPES 350
Query: 168 FHHEQDMVQWTEKLRPCAEALYIVLFENYSQLLCPVVGSILQEAMKSCPTSVTENTPXXX 227
FHHEQDMVQWTEKLRPCAEALYIVLFE SQLL PVV S+LQE+M +CPT VTE TP
Sbjct: 351 FHHEQDMVQWTEKLRPCAEALYIVLFETNSQLLGPVVVSLLQESMNNCPTPVTEITPALL 410
Query: 228 XXXXXXXXXXXXXXXXSNYLSFKDWPQG 255
SNYLSFKDW G
Sbjct: 411 LKDAAYGATAYVYYELSNYLSFKDWFNG 438
>Glyma16g19490.1
Length = 1000
Score = 269 bits (687), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 132/177 (74%), Positives = 141/177 (79%), Gaps = 1/177 (0%)
Query: 49 HAFSAQDYVALGLVFCF-FSKITDPEPYLLSFEQFLIQCMVMIKNILECKEYKPTLTGRV 107
H +S D L V F ++ITDP+PYLLSFEQFLIQCMVMIKNILECKEYKP+LTGRV
Sbjct: 274 HPYSFGDKFVLSSVLDFCLNRITDPDPYLLSFEQFLIQCMVMIKNILECKEYKPSLTGRV 333
Query: 108 MDENGVTLEQIKKNIXXXXXXXXXXXXPNERIVLLCNVLIQRYFVLTASDLEEWYRNPES 167
MDENGVTLE +KKNI P ERIV LCNVLI RYFVLTASDLEEWYRNPES
Sbjct: 334 MDENGVTLELMKKNISSAVGGVLTSLLPTERIVHLCNVLISRYFVLTASDLEEWYRNPES 393
Query: 168 FHHEQDMVQWTEKLRPCAEALYIVLFENYSQLLCPVVGSILQEAMKSCPTSVTENTP 224
FHHEQDMVQWTEKLRPCAEALYIVLFE SQLL PVV +LQE+M +CPTSV E TP
Sbjct: 394 FHHEQDMVQWTEKLRPCAEALYIVLFETNSQLLGPVVVFLLQESMNNCPTSVAEITP 450
>Glyma10g10160.1
Length = 2160
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 39/50 (78%)
Query: 255 GKCIYLVLYVEGIVITGDGHNDIDRLKQHLFRRCQTKDLALLKYFLGIDV 304
GKC+YL++YV+ IVITG+ I +LK+HLF QTKDL LKYFLGI+V
Sbjct: 1835 GKCVYLMVYVDDIVITGNDATKISQLKEHLFSHFQTKDLGSLKYFLGIEV 1884
>Glyma07g37310.2
Length = 1310
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 40/50 (80%)
Query: 255 GKCIYLVLYVEGIVITGDGHNDIDRLKQHLFRRCQTKDLALLKYFLGIDV 304
GKC+YL++YV+ IVITG+ + I +LK+HLF QTKDL LKYFLGI+V
Sbjct: 572 GKCVYLIVYVDDIVITGNDASKIIQLKEHLFSHFQTKDLGYLKYFLGIEV 621
>Glyma07g18520.1
Length = 1102
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 39/50 (78%)
Query: 255 GKCIYLVLYVEGIVITGDGHNDIDRLKQHLFRRCQTKDLALLKYFLGIDV 304
GKC+YL++YV+ IVITG+ I +LK+HLF QTKDL LKYFLGI+V
Sbjct: 777 GKCVYLMVYVDDIVITGNDTTKIVQLKEHLFSHFQTKDLGSLKYFLGIEV 826
>Glyma16g13610.1
Length = 2095
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 39/50 (78%)
Query: 255 GKCIYLVLYVEGIVITGDGHNDIDRLKQHLFRRCQTKDLALLKYFLGIDV 304
GKC+YL++YV+ IVITG+ I +LK+HLF QTKDL LKYFLGI+V
Sbjct: 1553 GKCVYLMVYVDDIVITGNDTTKIVQLKEHLFSHFQTKDLGSLKYFLGIEV 1602
>Glyma17g31360.1
Length = 1478
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%)
Query: 255 GKCIYLVLYVEGIVITGDGHNDIDRLKQHLFRRCQTKDLALLKYFLGIDV 304
GKC+YL++YV+ IVIT + I +LK+HLF QTKDL LKYFLGI+V
Sbjct: 1153 GKCVYLMVYVDDIVITRNDATKISQLKEHLFSHFQTKDLGYLKYFLGIEV 1202
>Glyma19g27810.1
Length = 682
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 31/44 (70%)
Query: 261 VLYVEGIVITGDGHNDIDRLKQHLFRRCQTKDLALLKYFLGIDV 304
V+YV+ IV+TG+ I + KQHL QTKDL LKYFLGI+V
Sbjct: 546 VVYVDDIVVTGNDDIKISQSKQHLSSHFQTKDLGHLKYFLGIEV 589
>Glyma01g29330.1
Length = 1049
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 32/47 (68%)
Query: 258 IYLVLYVEGIVITGDGHNDIDRLKQHLFRRCQTKDLALLKYFLGIDV 304
I LV+YV+ IVIT + D LK L + QTKDL +LKYFLGI+V
Sbjct: 589 ILLVVYVDDIVITRSDNKGTDNLKSFLQTQFQTKDLGVLKYFLGIEV 635