Miyakogusa Predicted Gene

Lj1g3v2809470.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2809470.1 tr|B9GR88|B9GR88_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_645504 PE=4
SV=1,37.01,0.00000000000003,coiled-coil,NULL;
seg,NULL,gene.g33621.t1.1
         (155 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g38810.1                                                       178   2e-45
Glyma18g47510.1                                                       106   9e-24

>Glyma09g38810.1 
          Length = 155

 Score =  178 bits (451), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 99/162 (61%), Positives = 117/162 (72%), Gaps = 16/162 (9%)

Query: 1   MAGSNLVTSLPKFGHXXXXXXXXXXWNTRVFAAATPRPIQVPTSHDQEGSVTSDGL--NT 58
           MA   LVTSLPKFGH          WN RVFAAATPRPIQVP    +EG  T++G     
Sbjct: 1   MASFTLVTSLPKFGHAGARIARSRAWNPRVFAAATPRPIQVP----REGPATAEGTTQGA 56

Query: 59  TETINNSLNEPLQDKAYSSNAAEHINNKAKDTAN-------QISKKAQNITEKAKQTMQE 111
           +ET+ NSLNE  QDKAYS+  AEH+ NK  + AN       Q+S  AQN+ +KAKQTMQE
Sbjct: 57  SETVINSLNE-AQDKAYST--AEHVANKKNEMANKTNKMAGQMSASAQNMADKAKQTMQE 113

Query: 112 AWDSTKNNANKAADNVLGKTQKSAEYVKENAETVKENMNSKN 153
           AW+STKN AN+AADNV+GKT++SAEYVK+NAETVK+NMNSKN
Sbjct: 114 AWESTKNTANRAADNVVGKTKESAEYVKDNAETVKQNMNSKN 155


>Glyma18g47510.1 
          Length = 114

 Score =  106 bits (265), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 62/106 (58%), Positives = 77/106 (72%), Gaps = 14/106 (13%)

Query: 59  TETINNSLNEPLQDKAYSSNAAEHINNKAKDTANQISKKAQNITEKAKQTMQEAWDSTKN 118
           +ET+NNSLNE  QDKAY++  AEH+ NK  + A Q+S  AQN+  KAKQTMQEAW+ +KN
Sbjct: 12  SETVNNSLNEA-QDKAYTT--AEHVANKTNEVAGQMSASAQNMAGKAKQTMQEAWEFSKN 68

Query: 119 NAN-----------KAADNVLGKTQKSAEYVKENAETVKENMNSKN 153
            AN            A DNV+GKT++SAEYVK+NAE VK+NMNSKN
Sbjct: 69  KANTVVGKTKESAEHAKDNVVGKTKESAEYVKDNAEAVKKNMNSKN 114