Miyakogusa Predicted Gene

Lj1g3v2808080.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2808080.1 tr|Q2HV80|Q2HV80_MEDTR Homeodomain-like
OS=Medicago truncatula GN=MtrDRAFT_AC148994g9v2 PE=4
SV=1,59.96,0,seg,NULL,CUFF.29511.1
         (951 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g38840.1                                                       899   0.0  
Glyma09g38840.2                                                       425   e-118
Glyma08g09120.1                                                        92   2e-18
Glyma05g26180.1                                                        91   9e-18
Glyma05g26180.2                                                        90   1e-17

>Glyma09g38840.1 
          Length = 856

 Score =  899 bits (2323), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 525/897 (58%), Positives = 624/897 (69%), Gaps = 54/897 (6%)

Query: 65  TSDGENPCFECAKQPDCSSSFTIQKPDDLRAGERGISDATESIVSKQKSLATRIPCEDNS 124
           TSDG+ PCF   KQP CSS   +Q   D + GE    DAT+   +  +S +   P EDN 
Sbjct: 4   TSDGKRPCF---KQPICSSLLPLQNICDPKTGELVNYDATQIRATTHESSSATNPSEDNI 60

Query: 125 KKDFGESPPVEKA-QNGCDTQRNSHASESSGNEFDNCSNKTIISPPVEMDAGNDLNFINS 183
           K+D  E P VE A QN CDTQRNS+A ESSGN  DNCSN  I S PVE+DAG+DLN + S
Sbjct: 61  KRDVSELPLVENASQNDCDTQRNSYADESSGNGCDNCSNN-INSLPVELDAGDDLNLVKS 119

Query: 184 ETPIAREFHSARSDESPALNIPMED--NSPSKDNFRNPSGQIVTQTNLTSPLITFYRRYK 241
           ET I REF SA  ++SP  N  +++  +S S  NF+NPSG +V QTNLTSP+ITF R YK
Sbjct: 120 ETLIIREFSSACVNKSPVSNNSVDEPTDSHSNVNFKNPSGDMVLQTNLTSPIITFNRCYK 179

Query: 242 RKECMDGTDRKSKLLKKENISVLTKWSKLANANGNFXXXXXXXXXXXPVDKVPDLNQSVE 301
           RK+   G ++ +   KKE+IS LTKWS LAN  GN            PVD VPDLNQSV 
Sbjct: 180 RKK---GLEQSNLSHKKESISALTKWSMLAN--GNPGLSNESSSEESPVDNVPDLNQSVG 234

Query: 302 LSERGKPSDQTEDETSYRNCSMLSVTDLNQSAELSKRGEIYQTQEQVVNADTSCTCGVVS 361
           LSERG+   +T+DETS R+CSM+  TDLNQSAELS+RGE+ QT+E+V   D+ C  GVVS
Sbjct: 235 LSERGQALSETQDETSCRSCSMVFQTDLNQSAELSERGELCQTEEKVKITDSPCPPGVVS 294

Query: 362 ETCMTQVKEELHHGEDIVQTVSHTSGTEVPSQSCLIHEETQHLRTDCQGVSINTDC---T 418
           ETCMT ++E+  HGED V+  SHT  T  PS +CLIH E QH+  DCQGVSI  D     
Sbjct: 295 ETCMTDMREQPCHGEDSVKNASHTDKTGEPSHNCLIHNEDQHILKDCQGVSIIVDSRGPY 354

Query: 419 PAATIADQELEKSQPSVREAGYNDTHNG-LNKSGEPQPKFDLAVNSAEERTVDLNSVADK 477
           P AT  DQELEKS     EA  N + N  + K GE QP+FDL VNSAEE TVDLN  A+K
Sbjct: 355 PVATTTDQELEKSLLLPCEAIENVSCNDIMKKIGEHQPQFDLPVNSAEENTVDLNLGAEK 414

Query: 478 HPLDLRIRTVGAKLDSASSRSAIAEDHVSHPEFLDSRDTQLVSEGKAIDGVCSSITQPQL 537
           +PL LR+RT+GAKL+S SS SAIAED VS  +FL+SR+TQL+SEGKAIDGVCSS TQPQL
Sbjct: 415 YPLHLRMRTLGAKLESTSSSSAIAEDQVSELDFLNSRNTQLISEGKAIDGVCSSSTQPQL 474

Query: 538 SGFMMPGESVNVQQTKTNKPRRVPMISLSLGLSLPMELSTGGCDSTNYLSLLPLSNSITD 597
              MM  E +NVQ TKT++P+ +P+ISLSLGLSLPME  TG  DS N LS+L LSNS T+
Sbjct: 475 ---MMSEERMNVQHTKTDQPKLMPVISLSLGLSLPMEHKTGCSDSVNSLSVLSLSNSTTE 531

Query: 598 TRDFVQDGL-YHSSTNRKPLLPRHKVVLDKIVNRARALNERGSFQENLKRNPFIWSEEEL 656
            RD VQDG  + SS NR+ LLPRH+VVLD IV+R RALNERG+FQE LK +P +WSEEEL
Sbjct: 532 ARDIVQDGFCWSSSVNRRSLLPRHQVVLDNIVHRTRALNERGNFQEYLKPHPIMWSEEEL 591

Query: 657 DFLWIGVRRHGRGNWVAMLRDPRLRFSPLRAPWDLAERWEDEQIKLLKDTCVPQHMYPNV 716
           DFLWIGVRRHGRGNW AMLRDPRL FSPLR P DLAERWEDEQ+KLL D  VPQ MY   
Sbjct: 592 DFLWIGVRRHGRGNWDAMLRDPRLWFSPLRVPGDLAERWEDEQLKLLNDISVPQFMY--- 648

Query: 717 ERPTAASLQGNFCFRHLELGSWRQNTMEETKLSPEDVISYRESNLLRQSLAGLNYQNDTA 776
             P AASLQGNFC+                 L P+   S+ ESN L++SL   N+Q++T 
Sbjct: 649 --PAAASLQGNFCY-----------------LDPKS--SFWESNPLKKSLPRYNFQSNTT 687

Query: 777 LHSLRPTIHSRRASYNN--NIEWGFFNSPGSSSLSMENSYANDYPFNFSTAKTNLPHWLR 834
            HS RPTIHSR+ASYNN    E GFFNSPGS  +S ENSY+NDY FN S    +LPHWLR
Sbjct: 688 AHSHRPTIHSRKASYNNIDKYELGFFNSPGSLGISRENSYSNDYSFNCSAVTNSLPHWLR 747

Query: 835 EAVTTPPMSVEPNLSATVSLSSHPHPEMLGAAERCYHADRSCFLPQIRLSGSRTNEQFSR 894
           EAV TPP  ++PN+SA +SLSS  HPE+ G ++RC+ A +SCF+PQ   +G   NE +  
Sbjct: 748 EAVNTPP--IQPNMSAAISLSS--HPEIPGTSDRCFSAGKSCFVPQNWFNGLTPNEIY-- 801

Query: 895 TSNGSPHYSTYSRRKYGMMKMNKPLQQHHVSKPXXXXXXXXXXXXEKTISDDNRSSL 951
            SNGS HYSTYSRRKYG++KMNK L+Q  V KP            E+TISDD+RSSL
Sbjct: 802 MSNGS-HYSTYSRRKYGVVKMNKSLEQ-RVHKPDNLIIIDSDTSSEETISDDHRSSL 856


>Glyma09g38840.2 
          Length = 627

 Score =  425 bits (1092), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 259/477 (54%), Positives = 306/477 (64%), Gaps = 64/477 (13%)

Query: 321 CSMLSVTDLNQSAELSKRGEIYQTQEQVVNADTSCTCGVVSETCMTQVKEELHHGEDIVQ 380
           CSM+  TDLNQSAELS+RGE+ QT+E+V   D+ C  GVVSETCMT ++E+  HGED V+
Sbjct: 4   CSMVFQTDLNQSAELSERGELCQTEEKVKITDSPCPPGVVSETCMTDMREQPCHGEDSVK 63

Query: 381 TVSHTSGTEVPSQSCLIHEETQHLRTDCQGVSINTDC---TPAATIADQELEKSQPSVRE 437
             SHT  T  PS +CLIH E QH+  DCQGVSI  D     P AT  DQELEKS     E
Sbjct: 64  NASHTDKTGEPSHNCLIHNEDQHILKDCQGVSIIVDSRGPYPVATTTDQELEKSLLLPCE 123

Query: 438 AGYNDTHNG-LNKSGEPQPKFDLAVNSAEERTVDLNSVADKHPLDLRIRTVGAKLDSASS 496
           A  N + N  + K GE QP+FDL VNSAEE TVDLN  A+K+PL LR+RT+GAKL+S SS
Sbjct: 124 AIENVSCNDIMKKIGEHQPQFDLPVNSAEENTVDLNLGAEKYPLHLRMRTLGAKLESTSS 183

Query: 497 RSAIAEDHV--------------------SHPEFLDSRDTQLVSEGKAIDGVCSSITQPQ 536
            SAIAED                      + P+F     T L+     I G C  +    
Sbjct: 184 SSAIAEDQKYTERENYNVKILANIFPFRKNKPKFEIMNKTLLLFPNWKI-GACLLL---- 238

Query: 537 LSGFMMPGESVNVQQTKTNKPRRVPMISLSLGLSLPMELSTGGCDSTNYLSLLPLSNSIT 596
                     ++   TKT++P+ +P+ISLSLGLSLPME  TG  DS N LS+L LSNS T
Sbjct: 239 ----------LSFLHTKTDQPKLMPVISLSLGLSLPMEHKTGCSDSVNSLSVLSLSNSTT 288

Query: 597 DTRDFVQDGL-YHSSTNRKPLLPRHKVVLDKIVNRARALNERGSFQENLKRNPFIWSEEE 655
           + RD VQDG  + SS NR+ LLPRH+VVLD IV+R RALNERG+FQE LK +P +WSEEE
Sbjct: 289 EARDIVQDGFCWSSSVNRRSLLPRHQVVLDNIVHRTRALNERGNFQEYLKPHPIMWSEEE 348

Query: 656 LDFLWIGVRRHGRGNWVAMLRDPRLRFSPLRAPWDLAERWEDEQIKLLKDTCVPQHMYPN 715
           LDFLWIGVRRHGRGNW AMLRDPRL FSPLR P DLAERWEDEQ+KLL D  VPQ MY  
Sbjct: 349 LDFLWIGVRRHGRGNWDAMLRDPRLWFSPLRVPGDLAERWEDEQLKLLNDISVPQFMY-- 406

Query: 716 VERPTAASLQGNFCFRHLELGSWRQNTMEETKLSPEDVISYRESNLLRQSLAGLNYQ 772
              P AASLQGNFC+                 L P+   S+ ESN L++SL   N+Q
Sbjct: 407 ---PAAASLQGNFCY-----------------LDPKS--SFWESNPLKKSLPRYNFQ 441



 Score = 93.2 bits (230), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 54/101 (53%), Positives = 68/101 (67%), Gaps = 6/101 (5%)

Query: 851 TVSLSSHPHPEMLGAAERCYHADRSCFLPQIRLSGSRTNEQFSRTSNGSPHYSTYSRRKY 910
           T+SLSSHP  E+ G ++RC+ A +SCF+PQ   +G   NE +   SNGS HYSTYSRRKY
Sbjct: 442 TISLSSHP--EIPGTSDRCFSAGKSCFVPQNWFNGLTPNEIY--MSNGS-HYSTYSRRKY 496

Query: 911 GMMKMNKPLQQHHVSKPXXXXXXXXXXXXEKTISDDNRSSL 951
           G++KMNK L+Q  V KP            E+TISDD+RSSL
Sbjct: 497 GVVKMNKSLEQ-RVHKPDNLIIIDSDTSSEETISDDHRSSL 536


>Glyma08g09120.1 
          Length = 2212

 Score = 92.0 bits (227), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 47/93 (50%), Positives = 59/93 (63%), Gaps = 9/93 (9%)

Query: 620  HKVVLDKIVNRARALNERGSFQENL---KRNPFIWSEEELDFLWIGVRRHGRGNWVAMLR 676
            H+ VL+ I+ R       GS   NL   K     WSE+ELD LWIGVRRHGRGNW AMLR
Sbjct: 1702 HRKVLENIMMRT------GSGSSNLLKKKSKSDGWSEDELDSLWIGVRRHGRGNWDAMLR 1755

Query: 677  DPRLRFSPLRAPWDLAERWEDEQIKLLKDTCVP 709
            DP+L+FS  +   DL+ RWE+EQ+K+ +    P
Sbjct: 1756 DPKLKFSKYKTSEDLSVRWEEEQVKVFQGPPFP 1788


>Glyma05g26180.1 
          Length = 2340

 Score = 90.5 bits (223), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 47/93 (50%), Positives = 59/93 (63%), Gaps = 9/93 (9%)

Query: 620  HKVVLDKIVNRARALNERGSFQENL---KRNPFIWSEEELDFLWIGVRRHGRGNWVAMLR 676
            H+ VL+ I+ R       GS   NL   K     WSE+ELD LWIGVRRHGRGNW AMLR
Sbjct: 1806 HRKVLENIMMRT------GSGSSNLLKKKSRSDGWSEDELDSLWIGVRRHGRGNWDAMLR 1859

Query: 677  DPRLRFSPLRAPWDLAERWEDEQIKLLKDTCVP 709
            DP+L+FS  +   DL+ RWE+EQ+K+ +    P
Sbjct: 1860 DPKLKFSKYKTSEDLSVRWEEEQVKVFQGPPFP 1892


>Glyma05g26180.2 
          Length = 1683

 Score = 90.1 bits (222), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 47/93 (50%), Positives = 59/93 (63%), Gaps = 9/93 (9%)

Query: 620  HKVVLDKIVNRARALNERGSFQENL---KRNPFIWSEEELDFLWIGVRRHGRGNWVAMLR 676
            H+ VL+ I+ R       GS   NL   K     WSE+ELD LWIGVRRHGRGNW AMLR
Sbjct: 1149 HRKVLENIMMRT------GSGSSNLLKKKSRSDGWSEDELDSLWIGVRRHGRGNWDAMLR 1202

Query: 677  DPRLRFSPLRAPWDLAERWEDEQIKLLKDTCVP 709
            DP+L+FS  +   DL+ RWE+EQ+K+ +    P
Sbjct: 1203 DPKLKFSKYKTSEDLSVRWEEEQVKVFQGPPFP 1235