Miyakogusa Predicted Gene

Lj1g3v2807690.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2807690.1 Non Chatacterized Hit- tr|K4AZR0|K4AZR0_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,51.33,3e-18,coiled-coil,NULL; seg,NULL,CUFF.29499.1
         (114 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g03400.1                                                       137   3e-33
Glyma07g06820.1                                                       108   2e-24
Glyma18g47410.1                                                        65   1e-11
Glyma09g38900.1                                                        65   2e-11

>Glyma16g03400.1 
          Length = 777

 Score =  137 bits (345), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 73/112 (65%), Positives = 83/112 (74%), Gaps = 3/112 (2%)

Query: 1   MWGTIANLKENLNKIALDVHFXXXXXXGVGIPPYGSPAHGESTPVSDRRNSYGHTRARSI 60
           MWGTIANLKENLNKIALDVH          +   GSP++G S+ VSDRR+S+G  R+RS 
Sbjct: 1   MWGTIANLKENLNKIALDVHDDDDDDEIFRVYGAGSPSNGGSSAVSDRRSSHGSVRSRSG 60

Query: 61  PRSPASNGTSTTDPPYASEIEQYKAEIKRLQASEAEIKALSINYAALLKEKE 112
            RSP +NG      P   EIEQYKAEIK+LQASEAEIKALS+NYAALLKEKE
Sbjct: 61  IRSPLANGIDHASLP---EIEQYKAEIKKLQASEAEIKALSVNYAALLKEKE 109


>Glyma07g06820.1 
          Length = 722

 Score =  108 bits (269), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/114 (63%), Positives = 82/114 (71%), Gaps = 8/114 (7%)

Query: 1   MWGTIANLKENLNKIALDVHFXXXXXXGVGIPPYG--SPAHGESTPVSDRRNSYGHTRAR 58
           MWGTIAN KENLNKIALDVH             YG  SPA+G+++ VSDRR+S G TR++
Sbjct: 1   MWGTIANFKENLNKIALDVHDDDDDEI---FRAYGAGSPANGDNSVVSDRRSSRGSTRSK 57

Query: 59  SIPRSPASNGTSTTDPPYASEIEQYKAEIKRLQASEAEIKALSINYAALLKEKE 112
              RSP +NG    D     EIEQYKAEIK+LQASEAEIKALS+NYAALLKEKE
Sbjct: 58  LGIRSPLANGI---DHASLHEIEQYKAEIKKLQASEAEIKALSVNYAALLKEKE 108


>Glyma18g47410.1 
          Length = 684

 Score = 65.5 bits (158), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 32/33 (96%), Positives = 33/33 (100%)

Query: 80  IEQYKAEIKRLQASEAEIKALSINYAALLKEKE 112
           IEQYKAEIKRLQASEAEIKALS+NYAALLKEKE
Sbjct: 1   IEQYKAEIKRLQASEAEIKALSVNYAALLKEKE 33


>Glyma09g38900.1 
          Length = 719

 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/33 (96%), Positives = 33/33 (100%)

Query: 80  IEQYKAEIKRLQASEAEIKALSINYAALLKEKE 112
           IEQYKAEIKRLQASEAEIKALS+NYAALLKEKE
Sbjct: 1   IEQYKAEIKRLQASEAEIKALSVNYAALLKEKE 33