Miyakogusa Predicted Gene

Lj1g3v2740260.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2740260.1 tr|D7KSP1|D7KSP1_ARALL Glycosyl transferase
family 1 protein OS=Arabidopsis lyrata subsp. lyrata
GN=,58.54,4e-19,seg,NULL; GLYCOSYLTRANSFERASE,NULL,CUFF.29726.1
         (146 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g03220.1                                                        89   1e-18
Glyma04g03170.1                                                        89   2e-18
Glyma17g37230.1                                                        86   1e-17
Glyma14g07740.1                                                        59   2e-09

>Glyma06g03220.1 
          Length = 464

 Score = 89.4 bits (220), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/137 (53%), Positives = 83/137 (60%), Gaps = 12/137 (8%)

Query: 1   MARHSPAWLTAMPKNWFPXXXXXXXXXXXXXXXXFIRTTSDSCNAS--------QPHPEL 52
           MA+HS     AM K  +P                     SDSCN +        Q    +
Sbjct: 1   MAKHS----VAMAKKRWPIMLAAFLSVSTVTVLLMRSNNSDSCNTNHFTVAQDNQIRSPV 56

Query: 53  HVPPSPEPSLEFMKSKRVLMVSHELSLSGGPLLLMELAFLLRGVGSDVVWITNQKPLQSD 112
            +  +    L FMKSK VLMVSHELSLSGGPLLLMELAFLLRGVGSDVVWI+NQKP + D
Sbjct: 57  QLTNAASSPLIFMKSKLVLMVSHELSLSGGPLLLMELAFLLRGVGSDVVWISNQKPSEHD 116

Query: 113 DIVYSLENKMLDRGVQV 129
            +VYSLE+KMLDRGVQV
Sbjct: 117 RVVYSLESKMLDRGVQV 133


>Glyma04g03170.1 
          Length = 454

 Score = 88.6 bits (218), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/101 (65%), Positives = 75/101 (74%), Gaps = 9/101 (8%)

Query: 38  TTSDSCNA-----SQPHPELHVP----PSPEPSLEFMKSKRVLMVSHELSLSGGPLLLME 88
             SDSCN      +Q + ++  P     +    L FMKSK VLMVSHELSLSGGPLLLME
Sbjct: 34  NNSDSCNTNHFTIAQDNNQIRSPVQLTNAASSPLNFMKSKLVLMVSHELSLSGGPLLLME 93

Query: 89  LAFLLRGVGSDVVWITNQKPLQSDDIVYSLENKMLDRGVQV 129
           LAFLLRGVGSDVVWITNQKP + D ++YSLE+KMLDRGVQV
Sbjct: 94  LAFLLRGVGSDVVWITNQKPSEHDQVIYSLESKMLDRGVQV 134


>Glyma17g37230.1 
          Length = 463

 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/137 (57%), Positives = 89/137 (64%), Gaps = 14/137 (10%)

Query: 1   MARHSPAWLTAMPKNWFPXXXXXXXXXXXXXXXXFIRTTSDSC--------NASQPHPEL 52
           M +HS AWL    K                    F+RTTSDSC        +A QP  + 
Sbjct: 1   MVKHSQAWLAMRSKTC--ALTLLALLSLSTLTLLFLRTTSDSCTQPQVRNLDALQPRTDS 58

Query: 53  HVPPSPEPSLEFMKSKRVLMVSHELSLSGGPLLLMELAFLLRGVGSDVVWITNQKPLQSD 112
            +P +P   LEFMKSK VLMVSHELSLSGGPLLLMELAFLLR  GSDVVWITNQKP + D
Sbjct: 59  KLP-NP---LEFMKSKLVLMVSHELSLSGGPLLLMELAFLLRSAGSDVVWITNQKPPKPD 114

Query: 113 DIVYSLENKMLDRGVQV 129
           D++Y+LENKMLDRGVQV
Sbjct: 115 DVIYTLENKMLDRGVQV 131


>Glyma14g07740.1 
          Length = 287

 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/35 (77%), Positives = 30/35 (85%), Gaps = 1/35 (2%)

Query: 94  RGVGSDVVWITNQKPLQ-SDDIVYSLENKMLDRGV 127
           R  GSDVVWITNQKP Q  DD++Y+LENKMLDRGV
Sbjct: 39  RSAGSDVVWITNQKPPQPYDDVIYTLENKMLDRGV 73