Miyakogusa Predicted Gene
- Lj1g3v2671420.4
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2671420.4 tr|C0Z2X2|C0Z2X2_ARATH AT2G45950 protein
OS=Arabidopsis thaliana GN=AT2G45950 PE=2 SV=1,75,4e-17,no
description,BTB/POZ fold; Found in Skp1 protein family,SKP1 component;
Skp1,SKP1 component, dimer,CUFF.29409.4
(159 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma09g39480.1 259 8e-70
Glyma18g46780.1 258 2e-69
Glyma07g07600.1 254 4e-68
Glyma03g01090.1 252 1e-67
Glyma03g01090.2 234 2e-62
Glyma16g30080.2 229 7e-61
Glyma09g25090.1 228 3e-60
Glyma16g30080.1 222 1e-58
Glyma11g08440.1 79 2e-15
Glyma02g05120.1 78 3e-15
Glyma01g36850.2 77 6e-15
Glyma16g23230.1 76 2e-14
Glyma01g36850.1 64 8e-11
Glyma11g13370.1 54 6e-08
Glyma15g41490.1 50 1e-06
>Glyma09g39480.1
Length = 346
Score = 259 bits (662), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 124/159 (77%), Positives = 136/159 (85%)
Query: 1 MAEIDKGVIKPEMLKPYVWLQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISL 60
M+EID VIKPEM+KPY+WL+TSDGSIQQVE E+A CPLICQEII KG GSSKNCAI L
Sbjct: 1 MSEIDMAVIKPEMMKPYIWLETSDGSIQQVEQEIAMYCPLICQEIIQKGMGSSKNCAICL 60
Query: 61 PQEVSPAMLSLILDYCRFHQRQGRSNKEKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLV 120
PQ VSPA LSLILDYC FHQ GRSNKE+KSYDEKFI+ DT +L L AADSLQLK LV
Sbjct: 61 PQRVSPATLSLILDYCHFHQVPGRSNKERKSYDEKFIRMDTKRLCELTSAADSLQLKPLV 120
Query: 121 DLTSCAIARVMEGKSPEVIREMFHLPDDLTEEEKLEPFK 159
DLTS A+AR++EGKSPE IRE+FHLPDDLTEEEKLEP K
Sbjct: 121 DLTSRALARIIEGKSPEEIREIFHLPDDLTEEEKLEPLK 159
>Glyma18g46780.1
Length = 320
Score = 258 bits (658), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 123/159 (77%), Positives = 136/159 (85%)
Query: 1 MAEIDKGVIKPEMLKPYVWLQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISL 60
M+EID VIKPEM+KPY+WL+TSDGSIQQVE E+A CPLICQEII KG GSSK+CAI L
Sbjct: 1 MSEIDMAVIKPEMMKPYIWLETSDGSIQQVEQEIAMYCPLICQEIIQKGMGSSKSCAICL 60
Query: 61 PQEVSPAMLSLILDYCRFHQRQGRSNKEKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLV 120
PQ VSP LSLILDYCRFHQ GRSNKE+KSYDEKFI+ DT +L L AADSLQLK LV
Sbjct: 61 PQRVSPVTLSLILDYCRFHQVPGRSNKERKSYDEKFIRMDTKRLCELTSAADSLQLKPLV 120
Query: 121 DLTSCAIARVMEGKSPEVIREMFHLPDDLTEEEKLEPFK 159
DLTS A+AR++EGKSPE IRE+FHLPDDLTEEEKLEP K
Sbjct: 121 DLTSRALARIIEGKSPEEIREIFHLPDDLTEEEKLEPLK 159
>Glyma07g07600.1
Length = 351
Score = 254 bits (648), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 121/159 (76%), Positives = 136/159 (85%)
Query: 1 MAEIDKGVIKPEMLKPYVWLQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISL 60
M+E D VIKPEM+KPYVWLQTSD SIQQVE E+A PLICQEII KG GSSKNCAI L
Sbjct: 1 MSETDLAVIKPEMMKPYVWLQTSDDSIQQVEQEIAMFSPLICQEIIQKGMGSSKNCAICL 60
Query: 61 PQEVSPAMLSLILDYCRFHQRQGRSNKEKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLV 120
PQ+VSPAMLSLILDYCRFHQ GRSNKE+KSYDEKF++ DT +L L AADSLQLK LV
Sbjct: 61 PQQVSPAMLSLILDYCRFHQVPGRSNKERKSYDEKFVRIDTERLCELTSAADSLQLKPLV 120
Query: 121 DLTSCAIARVMEGKSPEVIREMFHLPDDLTEEEKLEPFK 159
DLTS A+AR++EGK+PE IR++FHLPDDLTEEEKLEP +
Sbjct: 121 DLTSRALARIIEGKTPEEIRDIFHLPDDLTEEEKLEPLR 159
>Glyma03g01090.1
Length = 330
Score = 252 bits (643), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 121/159 (76%), Positives = 137/159 (86%)
Query: 1 MAEIDKGVIKPEMLKPYVWLQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISL 60
M+EID VIKPEM+K YVWLQTSD SIQQVE E+A CPLICQEII KG GSSK+CAI L
Sbjct: 1 MSEIDLAVIKPEMMKLYVWLQTSDDSIQQVEQEIAMFCPLICQEIIQKGMGSSKSCAICL 60
Query: 61 PQEVSPAMLSLILDYCRFHQRQGRSNKEKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLV 120
PQ+VSPAMLSLILDYCRFHQ GRSNKE+KSYDEKF++ DT +L L AADSLQLK LV
Sbjct: 61 PQQVSPAMLSLILDYCRFHQVPGRSNKERKSYDEKFVRIDTERLCELTSAADSLQLKPLV 120
Query: 121 DLTSCAIARVMEGKSPEVIREMFHLPDDLTEEEKLEPFK 159
DLTS A+AR++EGK+PE IR++FHLPDDLTEEEKLEP +
Sbjct: 121 DLTSRALARIIEGKTPEEIRDIFHLPDDLTEEEKLEPLR 159
>Glyma03g01090.2
Length = 322
Score = 234 bits (598), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 112/147 (76%), Positives = 127/147 (86%)
Query: 13 MLKPYVWLQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISLPQEVSPAMLSLI 72
M+K YVWLQTSD SIQQVE E+A CPLICQEII KG GSSK+CAI LPQ+VSPAMLSLI
Sbjct: 1 MMKLYVWLQTSDDSIQQVEQEIAMFCPLICQEIIQKGMGSSKSCAICLPQQVSPAMLSLI 60
Query: 73 LDYCRFHQRQGRSNKEKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAIARVME 132
LDYCRFHQ GRSNKE+KSYDEKF++ DT +L L AADSLQLK LVDLTS A+AR++E
Sbjct: 61 LDYCRFHQVPGRSNKERKSYDEKFVRIDTERLCELTSAADSLQLKPLVDLTSRALARIIE 120
Query: 133 GKSPEVIREMFHLPDDLTEEEKLEPFK 159
GK+PE IR++FHLPDDLTEEEKLEP +
Sbjct: 121 GKTPEEIRDIFHLPDDLTEEEKLEPLR 147
>Glyma16g30080.2
Length = 261
Score = 229 bits (585), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 110/159 (69%), Positives = 129/159 (81%), Gaps = 1/159 (0%)
Query: 1 MAEIDKGVIKPEMLKPYVWLQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISL 60
M++ V+KPEM K Y+WLQT DGSIQQVE EVA CP+ICQE++ G GSSKN AISL
Sbjct: 1 MSDAAMAVVKPEM-KSYIWLQTVDGSIQQVEEEVAMFCPMICQEVLQTGMGSSKNYAISL 59
Query: 61 PQEVSPAMLSLILDYCRFHQRQGRSNKEKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLV 120
PQ V+PA+L LILDYCRFHQ G SNKE+K++DEKFI+ DT +L L AADSLQLK LV
Sbjct: 60 PQRVNPAILGLILDYCRFHQVPGHSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLV 119
Query: 121 DLTSCAIARVMEGKSPEVIREMFHLPDDLTEEEKLEPFK 159
DLTS A+AR++EGK+PE IRE FHLPDDLTEEEKLEP +
Sbjct: 120 DLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLR 158
>Glyma09g25090.1
Length = 366
Score = 228 bits (580), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 109/153 (71%), Positives = 125/153 (81%), Gaps = 1/153 (0%)
Query: 7 GVIKPEMLKPYVWLQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISLPQEVSP 66
V+KPEM K Y+WLQT DGSIQQVE EVA CP+ICQE++ G GSSK AISLPQ V+P
Sbjct: 7 AVVKPEM-KSYIWLQTVDGSIQQVEEEVAMFCPMICQEVLQTGLGSSKTYAISLPQRVNP 65
Query: 67 AMLSLILDYCRFHQRQGRSNKEKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCA 126
AML LILDYCRFHQ G SNKE+K++DEKFI+ DT +L L AADSLQLK LVDLTS A
Sbjct: 66 AMLGLILDYCRFHQVPGHSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRA 125
Query: 127 IARVMEGKSPEVIREMFHLPDDLTEEEKLEPFK 159
+AR++EGK+PE IRE FHLPDDLTEEEKLEP +
Sbjct: 126 LARIIEGKTPEEIRETFHLPDDLTEEEKLEPLR 158
>Glyma16g30080.1
Length = 264
Score = 222 bits (565), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 104/146 (71%), Positives = 121/146 (82%)
Query: 14 LKPYVWLQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISLPQEVSPAMLSLIL 73
+K Y+WLQT DGSIQQVE EVA CP+ICQE++ G GSSKN AISLPQ V+PA+L LIL
Sbjct: 16 MKSYIWLQTVDGSIQQVEEEVAMFCPMICQEVLQTGMGSSKNYAISLPQRVNPAILGLIL 75
Query: 74 DYCRFHQRQGRSNKEKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAIARVMEG 133
DYCRFHQ G SNKE+K++DEKFI+ DT +L L AADSLQLK LVDLTS A+AR++EG
Sbjct: 76 DYCRFHQVPGHSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEG 135
Query: 134 KSPEVIREMFHLPDDLTEEEKLEPFK 159
K+PE IRE FHLPDDLTEEEKLEP +
Sbjct: 136 KTPEEIRETFHLPDDLTEEEKLEPLR 161
>Glyma11g08440.1
Length = 155
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 10/136 (7%)
Query: 20 LQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISLPQEVSPAMLSLILDYCRFH 79
L++SDG +VE VA L Q I H + I LP V+ +L+ +++YC+ H
Sbjct: 9 LKSSDGEAFEVEEAVA----LESQTIKHMIEDDCADSGIPLPN-VTSKILAKVIEYCKKH 63
Query: 80 QRQGR-----SNKEKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAIARVMEGK 134
S + K++D +F+K D LF L+ AA+ L +KSL+DLT +A +++GK
Sbjct: 64 VEAANPEDKPSEDDLKAWDAEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGK 123
Query: 135 SPEVIREMFHLPDDLT 150
+PE IR+ F++ +D T
Sbjct: 124 TPEEIRKTFNIKNDFT 139
>Glyma02g05120.1
Length = 155
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 78/136 (57%), Gaps = 10/136 (7%)
Query: 20 LQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISLPQEVSPAMLSLILDYCRFH 79
L++SDG +VE VA + Q I H + + I LP V+ +L+ +++YC+ H
Sbjct: 9 LKSSDGEAFEVEEAVA----VESQTIKHMIEDNCADSGIPLPN-VTSKILAKVIEYCKKH 63
Query: 80 -----QRQGRSNKEKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAIARVMEGK 134
+ S E K++D F+K D LF L+ AA+ L +KSL+DLT +A +++GK
Sbjct: 64 VEANCADEKPSEDELKAWDADFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGK 123
Query: 135 SPEVIREMFHLPDDLT 150
+PE IR+ F++ +D T
Sbjct: 124 TPEEIRKTFNIKNDFT 139
>Glyma01g36850.2
Length = 155
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 76/136 (55%), Gaps = 10/136 (7%)
Query: 20 LQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISLPQEVSPAMLSLILDYCRFH 79
L++SDG +V+ VA L Q I H + I LP V+ +L+ +++YC+ H
Sbjct: 9 LKSSDGEAFEVDEAVA----LESQTIKHMIEDDCADSGIPLPN-VTSKILAKVIEYCKKH 63
Query: 80 QRQGR-----SNKEKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAIARVMEGK 134
S + K++D F+K D LF L+ AA+ L +KSL+DLT +A +++GK
Sbjct: 64 VEAANPEDKPSEDDLKAWDADFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGK 123
Query: 135 SPEVIREMFHLPDDLT 150
+PE IR+ F++ +D T
Sbjct: 124 TPEEIRKTFNIKNDFT 139
>Glyma16g23230.1
Length = 155
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 77/137 (56%), Gaps = 12/137 (8%)
Query: 20 LQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISLPQEVSPAMLSLILDYCRFH 79
L++SDG +VE VA L Q I H + I LP V+ +L+ +++YC+ H
Sbjct: 9 LKSSDGEAFEVEEAVA----LESQTIKHMIEDDCADSGIPLPN-VTSKILAKVIEYCKKH 63
Query: 80 QRQGRSNKEK------KSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAIARVMEG 133
+ S EK K++D F+ D LF L+ AA+ L +KSL+DLT +A +++G
Sbjct: 64 -VEANSADEKPSEDVLKAWDVDFVNVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKG 122
Query: 134 KSPEVIREMFHLPDDLT 150
K+PE IR+ F++ +D T
Sbjct: 123 KTPEEIRKTFNIKNDFT 139
>Glyma01g36850.1
Length = 179
Score = 63.5 bits (153), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 34/162 (20%)
Query: 18 VWLQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISLPQEVSPAMLSLILDYCR 77
+ L++SDG +V+ VA L Q I H + I LP V+ +L+ +++YC+
Sbjct: 7 ITLKSSDGEAFEVDEAVA----LESQTIKHMIEDDCADSGIPLPN-VTSKILAKVIEYCK 61
Query: 78 FHQRQGR-----SNKEKKSYDEKFIKKDTNQLFGLV------------------------ 108
H S + K++D F+K D LF L+
Sbjct: 62 KHVEAANPEDKPSEDDLKAWDADFVKVDQATLFDLILVQHLHDIQFHCSTLLFSLCLFSS 121
Query: 109 KAADSLQLKSLVDLTSCAIARVMEGKSPEVIREMFHLPDDLT 150
AA+ L +KSL+DLT +A +++GK+PE IR+ F++ +D T
Sbjct: 122 SAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFT 163
>Glyma11g13370.1
Length = 137
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 61/107 (57%), Gaps = 2/107 (1%)
Query: 50 TGSSKNCAISLP-QEVSPAMLSLILDYCRFHQRQGRSNKEKKSYDEKFIKK-DTNQLFGL 107
T + + AI++P V+ L+ +++YC+ H+R S K ++E+F + ++ L
Sbjct: 11 TSADTSAAIAIPLHNVAGRELARMVEYCKEHRRASVSAGNLKEFEERFAAALNLYEMKDL 70
Query: 108 VKAADSLQLKSLVDLTSCAIARVMEGKSPEVIREMFHLPDDLTEEEK 154
+ AA+ L K L++ S IA+ ++ KS E +R+ F + +D T EE+
Sbjct: 71 IIAANYLNTKKLLESLSRCIAKAIKNKSVEFVRDYFGVTNDYTTEEE 117
>Glyma15g41490.1
Length = 107
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 90 KSYDEKFIKK-DTNQLFGLVKAADSLQLKSLVDLTSCAIARVMEGKSPEVIREMFHLPDD 148
+ +DE+F+K +++F L+ AA+ L +K+L+D+ + IA ++ KS E +R+ F++ +D
Sbjct: 38 RGFDEEFVKTLGMDEVFELILAANYLNMKTLLDILTKIIADFIKNKSVEFVRKFFNIVND 97
Query: 149 LTEEEK 154
T EE+
Sbjct: 98 FTPEEE 103