Miyakogusa Predicted Gene

Lj1g3v2656180.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2656180.1 Non Chatacterized Hit- tr|F6I613|F6I613_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,60,3e-16,
,CUFF.29394.1
         (79 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g01290.1                                                       126   4e-30
Glyma18g46590.1                                                       107   3e-24

>Glyma03g01290.1 
          Length = 79

 Score =  126 bits (317), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 58/79 (73%), Positives = 69/79 (87%)

Query: 1  MSLMSPKSEKLVRRITIAVTVTASYFLLTADYGSQPNALDPIKKQLLSVESTVKDYIFGS 60
          MSLMSP++EKLVRR+T   TV ASYFLLTADYG +PNALDPIKKQ+LS +STVK+YI GS
Sbjct: 1  MSLMSPRTEKLVRRLTFVTTVAASYFLLTADYGPKPNALDPIKKQILSAQSTVKEYIVGS 60

Query: 61 KTESQKKQIGKLDSNKDHP 79
          K ESQ+  +G+LDSNKD+P
Sbjct: 61 KKESQESHVGRLDSNKDNP 79


>Glyma18g46590.1 
          Length = 74

 Score =  107 bits (266), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 48/76 (63%), Positives = 65/76 (85%), Gaps = 2/76 (2%)

Query: 4  MSPKSEKLVRRITIAVTVTASYFLLTADYGSQPNALDPIKKQLLSVESTVKDYIFGSKTE 63
          M+P+++++VRR+T+  T+TASYFLLTADY  +P  LDP+KK LLS ESTVK+Y+FGSK +
Sbjct: 1  MNPQADRVVRRVTMIATITASYFLLTADY--EPTVLDPVKKGLLSAESTVKEYVFGSKKQ 58

Query: 64 SQKKQIGKLDSNKDHP 79
          SQ+ Q+ KLDSNK+HP
Sbjct: 59 SQENQMEKLDSNKEHP 74