Miyakogusa Predicted Gene

Lj1g3v2635110.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2635110.1 Non Chatacterized Hit- tr|B8BNV9|B8BNV9_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,40.87,0.00000000000003,seg,NULL; FAMILY NOT
NAMED,NULL,CUFF.29418.1
         (169 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g02790.1                                                       201   3e-52

>Glyma19g02790.1 
          Length = 356

 Score =  201 bits (512), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 107/184 (58%), Positives = 130/184 (70%), Gaps = 18/184 (9%)

Query: 1   MQHVETITSSEVTFDLVHSIVDXXXXXXXXXXXXXXXXXNFIKKDDCARKQDQLLFKAKQ 60
           +QHVETI+SSEVTFD+V S VD                  F  +D+   KQDQLL KAKQ
Sbjct: 69  VQHVETISSSEVTFDIVQSFVDLGSSGASDSKSKIKERKKFFNRDN---KQDQLLSKAKQ 125

Query: 61  DIESLAKDTRFEQIWKSMKGNKGTEHEKALLEICNFYDIVRIDNDEKIKEVQQDVISLEE 120
           + ESLAKD RFEQIWK+ KGNKGT H+KAL E+C+ YDIVRIDN+EK KEVQQ+ +SLE+
Sbjct: 126 EKESLAKDARFEQIWKNRKGNKGTAHDKALQEMCHLYDIVRIDNEEKNKEVQQEEMSLED 185

Query: 121 KMLLSSFLPLLRDAVPIAASEI-------------EETYVYDFYTVKDEM--HVEDSSCS 165
           + LLSS+LPLLR+ +P AA+E+             EE YVYD YTVKDEM  +++DSSCS
Sbjct: 186 QRLLSSYLPLLREFIPNAAAEVETDLIAQLVGHSKEENYVYDLYTVKDEMDINIDDSSCS 245

Query: 166 YPLV 169
           YPLV
Sbjct: 246 YPLV 249