Miyakogusa Predicted Gene

Lj1g3v2628750.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2628750.3 tr|B9ICB1|B9ICB1_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_1098219 PE=3
SV=1,76.25,0,seg,NULL; no description,NULL; ACETYL-COENZYME A
CARBOXYLASE CARBOXYL TRANSFERASE ALPHA,Acetyl-CoA c,CUFF.29363.3
         (261 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g42310.2                                                       254   9e-68
Glyma18g42300.1                                                       253   2e-67
Glyma18g42280.1                                                       251   8e-67
Glyma18g42310.1                                                       173   2e-43

>Glyma18g42310.2 
          Length = 683

 Score =  254 bits (648), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 140/266 (52%), Positives = 182/266 (68%), Gaps = 12/266 (4%)

Query: 1   MKSEELGQGEAIAHNLRTMFGLKVPIXXXXXXXXXXXXALAIACPNKMFMLENSAFYVAS 60
           +KSEELGQGEAIAHNLR+MFGLKVP+            ALAI C NK+ MLEN+ FYVAS
Sbjct: 252 LKSEELGQGEAIAHNLRSMFGLKVPVISIVIGEGGSGGALAIGCANKLLMLENAVFYVAS 311

Query: 61  PDACAAILWXXXXXXXXXXXXLRITAQEHYRLGIADGIIPEPVGGAHADPTWTSQQIKLA 120
           P+ACAAILW            L+ITA E  +L IADG+IPEP+GGAHADP WTSQQIK A
Sbjct: 312 PEACAAILWKTAKASPKAAEKLKITATELCKLQIADGVIPEPLGGAHADPEWTSQQIKKA 371

Query: 121 ITQAMEELTKMDEEELLHHRHLKFRSIGGFQEGKPVEPERKRRMKPSEVNSSNITD--VE 178
           I + MEELTKM+ EELL HR LKFR IGGFQEG P++P+RK  MK  +++ + I D  +E
Sbjct: 372 IKETMEELTKMNTEELLKHRMLKFRKIGGFQEGIPIDPKRKANMKKRDLSIAKIPDAELE 431

Query: 179 SELQGLKKIILEAKGPSDPIS-----KEPIQKLVNEVDQEITKALISMGLTEKVQSVMKE 233
            E++ LK+ +LEAK  S P+       E +++L  EV  E ++A+ + GLT+ +  + +E
Sbjct: 432 VEVEKLKQQVLEAK-ESSPVPPKLDLDEMLKQLAREVGLEYSEAVKATGLTDSLLKLREE 490

Query: 234 LSSKASNDSPNQQPLDGNLKEKVDKI 259
           + SKA+ DS    PL   LK+K++K+
Sbjct: 491 V-SKANADSQIVDPL---LKDKIEKL 512


>Glyma18g42300.1 
          Length = 690

 Score =  253 bits (646), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 138/266 (51%), Positives = 183/266 (68%), Gaps = 12/266 (4%)

Query: 1   MKSEELGQGEAIAHNLRTMFGLKVPIXXXXXXXXXXXXALAIACPNKMFMLENSAFYVAS 60
           +KSEELGQGEAIAHNLR+MFGLKVP+            ALAI C NK+ MLEN+ FYVAS
Sbjct: 252 LKSEELGQGEAIAHNLRSMFGLKVPVISIVIGEGGSGGALAIGCANKLLMLENAVFYVAS 311

Query: 61  PDACAAILWXXXXXXXXXXXXLRITAQEHYRLGIADGIIPEPVGGAHADPTWTSQQIKLA 120
           P+ACAAILW            L+ITA E  +L IADG+IPEP+GGAHADP WTSQQIK A
Sbjct: 312 PEACAAILWKTAKASPKAAEKLKITATELCKLQIADGVIPEPLGGAHADPEWTSQQIKKA 371

Query: 121 ITQAMEELTKMDEEELLHHRHLKFRSIGGFQEGKPVEPERKRRMKPSEVNSSNITD--VE 178
           I + M+EL KM+ EELL HR LKFR IGGFQEG P++P+RK  MK  +++ + I+D  +E
Sbjct: 372 IKETMDELMKMNTEELLKHRMLKFRKIGGFQEGIPIDPKRKANMKKRDLSIAKISDAELE 431

Query: 179 SELQGLKKIILEAKGPSDPIS-----KEPIQKLVNEVDQEITKALISMGLTEKVQSVMKE 233
            E++ LK+ +LEAK  S P+       E +++L  EVD E ++A+ + GLT+ +  + +E
Sbjct: 432 VEVEKLKQQVLEAK-ESSPVPPKLDLDEMLKQLTREVDLEYSEAVKATGLTDSLLKLREE 490

Query: 234 LSSKASNDSPNQQPLDGNLKEKVDKI 259
           + SKA+ D+    PL   LK+K++K+
Sbjct: 491 V-SKANADNQIVDPL---LKDKIEKL 512


>Glyma18g42280.1 
          Length = 709

 Score =  251 bits (640), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 138/266 (51%), Positives = 182/266 (68%), Gaps = 12/266 (4%)

Query: 1   MKSEELGQGEAIAHNLRTMFGLKVPIXXXXXXXXXXXXALAIACPNKMFMLENSAFYVAS 60
           +KSEELGQGEAIAHNLR+MFGLKVP+            ALAI C NK+ MLEN+ FYVAS
Sbjct: 252 LKSEELGQGEAIAHNLRSMFGLKVPVISIVIGEGGSGGALAIGCANKLLMLENAVFYVAS 311

Query: 61  PDACAAILWXXXXXXXXXXXXLRITAQEHYRLGIADGIIPEPVGGAHADPTWTSQQIKLA 120
           P+ACAAILW            L+ITA E  +L IADG+IPEP+GGAHADP WTSQQIK A
Sbjct: 312 PEACAAILWKTAKASPKAAEKLKITATELCKLQIADGVIPEPLGGAHADPEWTSQQIKKA 371

Query: 121 ITQAMEELTKMDEEELLHHRHLKFRSIGGFQEGKPVEPERKRRMKPSEVNSSNITD--VE 178
           I + M+ELTKM+ EELL HR LKFR IGGFQEG P++P+RK  MK  +++ + I D  +E
Sbjct: 372 IKETMDELTKMNTEELLKHRMLKFRKIGGFQEGIPIDPKRKANMKKRDLSIAKIPDAELE 431

Query: 179 SELQGLKKIILEAKGPSDPIS-----KEPIQKLVNEVDQEITKALISMGLTEKVQSVMKE 233
            E++ LK+ +LEAK  S P+       E +++L  EVD E ++A+ + GLT+ +  + +E
Sbjct: 432 VEVEKLKQQVLEAK-ESSPVPPKLDLDEMLKQLAREVDLEYSEAVKATGLTDSLLKLREE 490

Query: 234 LSSKASNDSPNQQPLDGNLKEKVDKI 259
           + SKA+ D+    PL   L+ K++K+
Sbjct: 491 V-SKANADNQIVDPL---LEGKIEKL 512


>Glyma18g42310.1 
          Length = 893

 Score =  173 bits (438), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 103/213 (48%), Positives = 142/213 (66%), Gaps = 14/213 (6%)

Query: 54  SAFYVASPDACAAILWXXXXXXXXXXXXLRITAQEHYRLGIADGIIPEPVGGAHADPTWT 113
           SA+ V  P+ACAAILW            L+ITA E  +L IADG+IPEP+GGAHADP WT
Sbjct: 533 SAYKV--PEACAAILWKTAKASPKAAEKLKITATELCKLQIADGVIPEPLGGAHADPEWT 590

Query: 114 SQQIKLAITQAMEELTKMDEEELLHHRHLKFRSIGGFQEGKPVEPERKRRMKPSEVNSSN 173
           SQQIK AI + M+ELTKM+ EELL HR LKFR IGGFQEG P++P+RK  MK  +++ + 
Sbjct: 591 SQQIKKAIKETMDELTKMNTEELLKHRMLKFRKIGGFQEGIPIDPKRKANMKKRDLSIAK 650

Query: 174 ITD--VESELQGLKKIILEAKGPSDPIS-----KEPIQKLVNEVDQEITKALISMGLTEK 226
           I D  +E E++ LK+ +LEAK  S P+       E +++L  EV  E ++A+ + GLT+ 
Sbjct: 651 IPDAELEVEVEKLKQQVLEAK-ESSPVPPKLDLDEMLKQLAREVGLEYSEAVKATGLTDS 709

Query: 227 VQSVMKELSSKASNDSPNQQPLDGNLKEKVDKI 259
           +  + +E+ SKA+ DS    PL   LK+K++K+
Sbjct: 710 LLKLREEV-SKANADSQIVDPL---LKDKIEKL 738



 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 38/59 (64%), Positives = 43/59 (72%)

Query: 1   MKSEELGQGEAIAHNLRTMFGLKVPIXXXXXXXXXXXXALAIACPNKMFMLENSAFYVA 59
           +KSEELGQGEAIAHNLR+MFGLKVP+            ALAI C NK+ MLEN+ FYVA
Sbjct: 252 LKSEELGQGEAIAHNLRSMFGLKVPVISIVIGEGGSGGALAIGCANKLLMLENAVFYVA 310