Miyakogusa Predicted Gene

Lj1g3v2628750.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2628750.2 tr|Q9LLR0|Q9LLR0_SOYBN Carboxyl transferase alpha
subunit OS=Glycine max GN=accA-1 PE=3 SV=1,33.33,2e-18,seg,NULL;
coiled-coil,NULL,CUFF.29363.2
         (347 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g42310.2                                                       100   2e-21
Glyma18g42300.1                                                       100   2e-21
Glyma18g42310.1                                                       100   3e-21
Glyma18g42280.1                                                        99   9e-21

>Glyma18g42310.2 
          Length = 683

 Score =  100 bits (250), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/250 (36%), Positives = 141/250 (56%), Gaps = 30/250 (12%)

Query: 1   MEELTKMDEEELLHHRHLKFRSIGGFQEGKPVEPERKRRMKPSEVNSSNITD--VESELQ 58
           MEELTKM+ EELL HR LKFR IGGFQEG P++P+RK  MK  +++ + I D  +E E++
Sbjct: 376 MEELTKMNTEELLKHRMLKFRKIGGFQEGIPIDPKRKANMKKRDLSIAKIPDAELEVEVE 435

Query: 59  GLKKIILEAKGPSDPISK-----EPIQKLVNEVDQEITKALISMGLTEKVQSVMKELSSK 113
            LK+ +LEAK  S P+       E +++L  EV  E ++A+ + GLT+ +  + +E+ SK
Sbjct: 436 KLKQQVLEAK-ESSPVPPKLDLDEMLKQLAREVGLEYSEAVKATGLTDSLLKLREEV-SK 493

Query: 114 ASNDSPNQQPLDGNLKEKVDKIMQEIKSKMSQPGAYLGLKQKLQKLDTVNRLMEVK---- 169
           A+ DS   Q +D  LK+K++K+  E + ++     Y  L+ K + L   + L +VK    
Sbjct: 494 ANADS---QIVDPLLKDKIEKLRVEFEQQLRAAPNYGRLQNKFKYL---SELCKVKLLSD 547

Query: 170 ----SQQEKLRQELNQK----LSDDTKAKIATLMQAQEQGRTQEMISNGESTDKELEEKA 221
               +Q    +QEL +K    LSD    +    ++A+ +G      S+    D EL++K 
Sbjct: 548 ANKDNQAVTFKQELEKKVDNALSDPKIRETFEALKAEIKGAGA---SSASDLDDELKKKI 604

Query: 222 VEVYKELEGV 231
           V    EL+ V
Sbjct: 605 VGFMIELKEV 614


>Glyma18g42300.1 
          Length = 690

 Score =  100 bits (249), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/244 (35%), Positives = 139/244 (56%), Gaps = 18/244 (7%)

Query: 1   MEELTKMDEEELLHHRHLKFRSIGGFQEGKPVEPERKRRMKPSEVNSSNITD--VESELQ 58
           M+EL KM+ EELL HR LKFR IGGFQEG P++P+RK  MK  +++ + I+D  +E E++
Sbjct: 376 MDELMKMNTEELLKHRMLKFRKIGGFQEGIPIDPKRKANMKKRDLSIAKISDAELEVEVE 435

Query: 59  GLKKIILEAKGPSDPISK-----EPIQKLVNEVDQEITKALISMGLTEKVQSVMKELSSK 113
            LK+ +LEAK  S P+       E +++L  EVD E ++A+ + GLT+ +  + +E+ SK
Sbjct: 436 KLKQQVLEAK-ESSPVPPKLDLDEMLKQLTREVDLEYSEAVKATGLTDSLLKLREEV-SK 493

Query: 114 ASNDSPNQQPLDGNLKEKVDKIMQEIKSKMSQPGAYLGLKQK---LQKLDTVNRLMEVKS 170
           A+ D+   Q +D  LK+K++K+  E + ++     Y  L+ K   L +L  V  L +   
Sbjct: 494 ANADN---QIVDPLLKDKIEKLRVEFEQQLRAAPNYGRLQNKFTYLSELCKVKLLSDANK 550

Query: 171 QQE--KLRQELNQKLSDD-TKAKIATLMQAQEQGRTQEMISNGESTDKELEEKAVEVYKE 227
             E    +QEL +K+ +  +  KI    +A +        S+    D EL++K VE   E
Sbjct: 551 DNEAVTFKQELEKKVDNALSNPKIRETFEALKAEIKGAGASSASDLDDELKKKIVEFMIE 610

Query: 228 LEGV 231
           L+ V
Sbjct: 611 LKEV 614


>Glyma18g42310.1 
          Length = 893

 Score =  100 bits (248), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 89/250 (35%), Positives = 140/250 (56%), Gaps = 30/250 (12%)

Query: 1   MEELTKMDEEELLHHRHLKFRSIGGFQEGKPVEPERKRRMKPSEVNSSNITD--VESELQ 58
           M+ELTKM+ EELL HR LKFR IGGFQEG P++P+RK  MK  +++ + I D  +E E++
Sbjct: 602 MDELTKMNTEELLKHRMLKFRKIGGFQEGIPIDPKRKANMKKRDLSIAKIPDAELEVEVE 661

Query: 59  GLKKIILEAKGPSDPISK-----EPIQKLVNEVDQEITKALISMGLTEKVQSVMKELSSK 113
            LK+ +LEAK  S P+       E +++L  EV  E ++A+ + GLT+ +  + +E+ SK
Sbjct: 662 KLKQQVLEAK-ESSPVPPKLDLDEMLKQLAREVGLEYSEAVKATGLTDSLLKLREEV-SK 719

Query: 114 ASNDSPNQQPLDGNLKEKVDKIMQEIKSKMSQPGAYLGLKQKLQKLDTVNRLMEVK---- 169
           A+ DS    PL   LK+K++K+  E + ++     Y  L+ K + L   + L +VK    
Sbjct: 720 ANADSQIVDPL---LKDKIEKLRVEFEQQLRAAPNYGRLQNKFKYL---SELCKVKLLSD 773

Query: 170 ----SQQEKLRQELNQK----LSDDTKAKIATLMQAQEQGRTQEMISNGESTDKELEEKA 221
               +Q    +QEL +K    LSD    +    ++A+ +G      S+    D EL++K 
Sbjct: 774 ANKDNQAVTFKQELEKKVDNALSDPKIRETFEALKAEIKGAGA---SSASDLDDELKKKI 830

Query: 222 VEVYKELEGV 231
           V    EL+ V
Sbjct: 831 VGFMIELKEV 840


>Glyma18g42280.1 
          Length = 709

 Score = 98.6 bits (244), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 139/240 (57%), Gaps = 24/240 (10%)

Query: 1   MEELTKMDEEELLHHRHLKFRSIGGFQEGKPVEPERKRRMKPSEVNSSNITD--VESELQ 58
           M+ELTKM+ EELL HR LKFR IGGFQEG P++P+RK  MK  +++ + I D  +E E++
Sbjct: 376 MDELTKMNTEELLKHRMLKFRKIGGFQEGIPIDPKRKANMKKRDLSIAKIPDAELEVEVE 435

Query: 59  GLKKIILEAKGPSDPISK-----EPIQKLVNEVDQEITKALISMGLTEKVQSVMKELSSK 113
            LK+ +LEAK  S P+       E +++L  EVD E ++A+ + GLT+ +  + +E+ SK
Sbjct: 436 KLKQQVLEAK-ESSPVPPKLDLDEMLKQLAREVDLEYSEAVKATGLTDSLLKLREEV-SK 493

Query: 114 ASNDSPNQQPLDGNLKEKVDKIMQEIKSKMSQPGAYLGLKQKLQKLDTVNRLM------- 166
           A+ D+   Q +D  L+ K++K+  E + ++     Y  L+ KL  L  + ++        
Sbjct: 494 ANADN---QIVDPLLEGKIEKLRVEFEQQLRAAPNYGRLQNKLNYLSELCKVKLLSDGKK 550

Query: 167 --EVKSQQEKLRQELNQKLSDDTKAKIATLMQAQEQGRTQEMISNGESTDKELEEKAVEV 224
             E  + +++L+++++  LSD    +    ++A+ +G      S+    D EL++K +E 
Sbjct: 551 DNEAVTFKQELKKKIDNALSDPKIRETFEALKAEIKGVGA---SSASDLDDELKKKIIEF 607