Miyakogusa Predicted Gene

Lj1g3v2628720.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2628720.1 tr|Q9M2D9|Q9M2D9_ARATH At3g61250 OS=Arabidopsis
thaliana GN=T20K12.150 PE=2 SV=1,44.87,3e-19, ,CUFF.29359.1
         (151 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g46480.1                                                       143   6e-35
Glyma03g01540.1                                                        90   9e-19
Glyma07g07960.1                                                        87   5e-18
Glyma09g39720.1                                                        67   8e-12
Glyma10g38090.1                                                        56   2e-08
Glyma20g29730.1                                                        52   2e-07

>Glyma18g46480.1 
          Length = 316

 Score =  143 bits (361), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 93/175 (53%), Positives = 110/175 (62%), Gaps = 31/175 (17%)

Query: 1   MAQWEGARLEAEARLSSLNT-------------TKTTHHCDHFLRMWNSEIGDSFRNFH- 46
           MAQWE ARLEAEARLS+ ++                T   D+FLR+WNSE+G++FRN H 
Sbjct: 149 MAQWESARLEAEARLSNESSRFSHNTTNNSNSDNNKTTDSDYFLRIWNSEVGEAFRNVHH 208

Query: 47  -KPDHNQNKNIN------SFCLSPLSAGSSSNKCDSVSA---VTTNAADPFGSSNNAVKQ 96
            K D + N N        S C SPLS GSSSNKC+S++    + +NA +    S+  VKQ
Sbjct: 209 HKADDDNNNNKITTNTPTSSCHSPLSTGSSSNKCESIATNADLASNAPEIITPSS-IVKQ 267

Query: 97  ELLCAEEDVVQHHGSDSSCSNDLEDSSDTALQLLLDFPIYNDMSFLEGNSFVCPL 151
           E            GSDSS SND+EDSSDTALQLLLDFPI NDMSFLEGNSFVCPL
Sbjct: 268 EFEWGTR------GSDSSSSNDMEDSSDTALQLLLDFPINNDMSFLEGNSFVCPL 316


>Glyma03g01540.1 
          Length = 272

 Score = 89.7 bits (221), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 68/148 (45%), Positives = 83/148 (56%), Gaps = 31/148 (20%)

Query: 1   MAQWEGARLEAEARLSS-----LNTTKTTHHCDHFLRMWNSEIGDSFRNFHKPDHNQNKN 55
           MAQWE ARLEAEARLS       N  KT    D+FLR+WNS++G+SFR+ HK +      
Sbjct: 151 MAQWESARLEAEARLSREPHLYYNNNKTD--SDYFLRIWNSDLGESFRDVHKLE------ 202

Query: 56  INSFCLSPLSAGSSSNKCDSVSAVTTNAADPFGSSNNAVKQELLCAEEDVVQHHGSDSSC 115
                        SS KC+S SA T  A+    S    VK+E L   + +V    S SS 
Sbjct: 203 -------------SSIKCESQSATTDLASLTPAS---IVKEEFLWGVKKIVSDSSSSSSE 246

Query: 116 SNDLEDSSDTALQLLLDFPIYNDMSFLE 143
            +   DS DT+LQLLLDFP+ NDMSFLE
Sbjct: 247 LH--HDSCDTSLQLLLDFPMNNDMSFLE 272


>Glyma07g07960.1 
          Length = 273

 Score = 87.4 bits (215), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 70/146 (47%), Positives = 84/146 (57%), Gaps = 25/146 (17%)

Query: 1   MAQWEGARLEAEARLSSLNTTKTTHHCDHFLRMWNSEIGDSFRNFHKPDHNQNKNINSFC 60
           MAQWE ARLEAEARLS           D+FLR+WNSE+G+SFR+ HK +           
Sbjct: 150 MAQWETARLEAEARLSREPHFNNKTDSDYFLRIWNSEVGESFRDVHKSE----------- 198

Query: 61  LSPLSAGSSSNKCDSVSAVTTNAADPFGSSNNA--VKQELLCAEEDVVQHHGSDSSCSND 118
                   SS KC+S+SA TT       SS  A  VK+E L   + +V      SS S++
Sbjct: 199 --------SSIKCESLSATTTTTTTDLASSTPASIVKKEFLWGVKKIVS---YSSSSSSE 247

Query: 119 LE-DSSDTALQLLLDFPIYNDMSFLE 143
           LE DS DT+LQ LLDFPI NDMSFLE
Sbjct: 248 LEHDSCDTSLQFLLDFPINNDMSFLE 273


>Glyma09g39720.1 
          Length = 273

 Score = 67.0 bits (162), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 31/34 (91%), Positives = 33/34 (97%)

Query: 116 SNDLEDSSDTALQLLLDFPIYNDMSFLEGNSFVC 149
           SND+EDSSDTALQLLLDFPI NDMSFLEGNSF+C
Sbjct: 214 SNDMEDSSDTALQLLLDFPINNDMSFLEGNSFMC 247


>Glyma10g38090.1 
          Length = 309

 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/48 (58%), Positives = 34/48 (70%), Gaps = 5/48 (10%)

Query: 1   MAQWEGARLEAEARLSS----LNTTKTTHHC-DHFLRMWNSEIGDSFR 43
           M QWE  R+EAEARLS     LN+  T+  C DHFL++WNSE+G SFR
Sbjct: 147 MVQWESVRVEAEARLSMESTMLNSWPTSKTCPDHFLQLWNSEVGKSFR 194


>Glyma20g29730.1 
          Length = 309

 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/48 (54%), Positives = 33/48 (68%), Gaps = 5/48 (10%)

Query: 1   MAQWEGARLEAEARLS----SLNTTKTTHHC-DHFLRMWNSEIGDSFR 43
           M QWE  R+E EARLS     LN+  T+  C DHFL++W+SE+G SFR
Sbjct: 147 MVQWESVRVETEARLSLESTMLNSWPTSKTCPDHFLQLWHSEVGKSFR 194