Miyakogusa Predicted Gene
- Lj1g3v2628710.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2628710.1 tr|G8A207|G8A207_MEDTR Remorin OS=Medicago
truncatula GN=MTR_128s0001 PE=2 SV=1,60,5e-19,FAMILY NOT NAMED,NULL;
coiled-coil,NULL; Remorin_C,Remorin, C-terminal; Remorin_N,Remorin,
N-termina,CUFF.29379.1
(141 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma09g39730.1 130 4e-31
Glyma18g46470.1 129 7e-31
Glyma07g07970.1 119 8e-28
Glyma03g01550.1 114 4e-26
Glyma07g07970.2 113 7e-26
Glyma09g25800.2 97 4e-21
Glyma10g38080.1 97 5e-21
Glyma20g29740.1 96 1e-20
Glyma09g25800.1 89 1e-18
Glyma16g31290.1 89 2e-18
Glyma16g31290.2 83 1e-16
Glyma08g01590.2 80 5e-16
Glyma08g01590.1 80 9e-16
Glyma07g07970.4 75 2e-14
Glyma07g07970.3 75 2e-14
Glyma11g02740.2 72 2e-13
Glyma11g02740.1 67 6e-12
Glyma05g37990.1 64 4e-11
Glyma01g42700.1 50 1e-06
>Glyma09g39730.1
Length = 183
Score = 130 bits (327), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/95 (71%), Positives = 80/95 (84%), Gaps = 2/95 (2%)
Query: 30 KKAPEVAADDSKALVVVPEKTPVPENKPSSKGSLDRDVALAELEKEKRLSYVKAWEESEK 89
KKA E ++SKA VV EKTPVPENK SS+GS+DRD+ALAE+EKEK+LSYVKAWEESEK
Sbjct: 29 KKASET--EESKATVVASEKTPVPENKQSSRGSIDRDIALAEVEKEKKLSYVKAWEESEK 86
Query: 90 SKTENKAQKNLSDVVEWENSKKAALEAQLRKIEEM 124
+K EN+AQK LS + WENSKKA LEA+L+KIEE
Sbjct: 87 AKAENRAQKQLSAIAAWENSKKATLEAELKKIEEQ 121
>Glyma18g46470.1
Length = 183
Score = 129 bits (325), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 74/123 (60%), Positives = 90/123 (73%), Gaps = 3/123 (2%)
Query: 1 MAELQKKAESDTTXXXXXXXXXXXXXXXXKKAPEVAADDSKALVVVPEKTPVPENKPSSK 60
MAELQ K+E+ KKA E +SKA+V V EKTPVP NK SS+
Sbjct: 1 MAELQSKSET-APAPAPVVAEVPSNDAVAKKASETG--ESKAIVSVSEKTPVPANKQSSR 57
Query: 61 GSLDRDVALAELEKEKRLSYVKAWEESEKSKTENKAQKNLSDVVEWENSKKAALEAQLRK 120
GS+DRD+ALAE+EKEK+LSYVKAWEESEK+K EN+AQK+LS + WENSKKAALEA+L+K
Sbjct: 58 GSIDRDIALAEVEKEKKLSYVKAWEESEKAKAENRAQKHLSAIAAWENSKKAALEAELKK 117
Query: 121 IEE 123
+EE
Sbjct: 118 LEE 120
>Glyma07g07970.1
Length = 198
Score = 119 bits (299), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 67/89 (75%), Positives = 73/89 (82%), Gaps = 3/89 (3%)
Query: 38 DDSKALVVVP---EKTPVPENKPSSKGSLDRDVALAELEKEKRLSYVKAWEESEKSKTEN 94
+++KALVVV EK P P K +S GSLDRD+ALAE+EKEKRLS VKAWEESEKSK EN
Sbjct: 47 EETKALVVVEKENEKIPEPVKKNASGGSLDRDIALAEIEKEKRLSNVKAWEESEKSKAEN 106
Query: 95 KAQKNLSDVVEWENSKKAALEAQLRKIEE 123
KAQK LS V WENSKKAALEAQLRKIEE
Sbjct: 107 KAQKQLSAVAAWENSKKAALEAQLRKIEE 135
>Glyma03g01550.1
Length = 200
Score = 114 bits (284), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/91 (70%), Positives = 73/91 (80%), Gaps = 5/91 (5%)
Query: 38 DDSKALVVVP-----EKTPVPENKPSSKGSLDRDVALAELEKEKRLSYVKAWEESEKSKT 92
+++KALVVV EK P P K ++ GSLDRD+ALAE+EKEKRLS VKAWEESEKSK
Sbjct: 47 EETKALVVVEKEKENEKIPEPVKKNATGGSLDRDIALAEIEKEKRLSNVKAWEESEKSKA 106
Query: 93 ENKAQKNLSDVVEWENSKKAALEAQLRKIEE 123
ENKA+K+LS V WENSK AALEAQLRKIEE
Sbjct: 107 ENKAEKHLSAVAAWENSKIAALEAQLRKIEE 137
>Glyma07g07970.2
Length = 141
Score = 113 bits (282), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 60/75 (80%), Positives = 63/75 (84%)
Query: 49 KTPVPENKPSSKGSLDRDVALAELEKEKRLSYVKAWEESEKSKTENKAQKNLSDVVEWEN 108
K P P K +S GSLDRD+ALAE+EKEKRLS VKAWEESEKSK ENKAQK LS V WEN
Sbjct: 4 KIPEPVKKNASGGSLDRDIALAEIEKEKRLSNVKAWEESEKSKAENKAQKQLSAVAAWEN 63
Query: 109 SKKAALEAQLRKIEE 123
SKKAALEAQLRKIEE
Sbjct: 64 SKKAALEAQLRKIEE 78
>Glyma09g25800.2
Length = 164
Score = 97.4 bits (241), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/104 (55%), Positives = 71/104 (68%), Gaps = 2/104 (1%)
Query: 38 DDSKALVVVPEKTPVPENKPSSKGSLDRDVALAELEKEKRLSYVKAWEESEKSKTENKAQ 97
D+SKALV+V + V E KP+ +GS++RD LA + EKRLS +KAWEESEKSK ENKA
Sbjct: 59 DESKALVLVEKTQEVAEVKPT-EGSINRDAVLARVATEKRLSLIKAWEESEKSKAENKAH 117
Query: 98 KNLSDVVEWENSKKAALEAQLRKIEEMHSLVFSYLIINMMKILF 141
K LS V WENSKKAA+EA L+KIE + S I + I F
Sbjct: 118 KKLSSVSAWENSKKAAVEADLKKIEVRIDFISSSNIFYVF-IFF 160
>Glyma10g38080.1
Length = 194
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 67/88 (76%), Gaps = 1/88 (1%)
Query: 37 ADDSKALVVVPEKTPVPENKPSSKGSLDRDVALAELEKEKRLSYVKAWEESEKSKTENKA 96
AD+SKALV+V + + V E KP +GS++RD LA + EKRLS +KAWEESEKSK +NK+
Sbjct: 46 ADESKALVIVEKTSEVAEEKPI-EGSVNRDAVLARVATEKRLSLIKAWEESEKSKADNKS 104
Query: 97 QKNLSDVVEWENSKKAALEAQLRKIEEM 124
K LS + WENSKKAA EA+LRKIEE
Sbjct: 105 HKKLSAISAWENSKKAAAEAELRKIEEQ 132
>Glyma20g29740.1
Length = 197
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 67/88 (76%), Gaps = 1/88 (1%)
Query: 37 ADDSKALVVVPEKTPVPENKPSSKGSLDRDVALAELEKEKRLSYVKAWEESEKSKTENKA 96
+D+SKALV+V + + V + KP +GS++RD LA + EKRLS +KAWEESEKSK+ENK+
Sbjct: 49 SDESKALVIVEKTSEVAQEKPI-EGSVNRDAVLARVATEKRLSLIKAWEESEKSKSENKS 107
Query: 97 QKNLSDVVEWENSKKAALEAQLRKIEEM 124
K LS + WENS KAA EA+LRKIEE
Sbjct: 108 HKKLSVISAWENSMKAAAEAELRKIEEQ 135
>Glyma09g25800.1
Length = 206
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/79 (63%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
Query: 38 DDSKALVVVPEKTPVPENKPSSKGSLDRDVALAELEKEKRLSYVKAWEESEKSKTENKAQ 97
D+SKALV+V + V E KP+ +GS++RD LA + EKRLS +KAWEESEKSK ENKA
Sbjct: 59 DESKALVLVEKTQEVAEVKPT-EGSINRDAVLARVATEKRLSLIKAWEESEKSKAENKAH 117
Query: 98 KNLSDVVEWENSKKAALEA 116
K LS V WENSKKAA+EA
Sbjct: 118 KKLSSVSAWENSKKAAVEA 136
>Glyma16g31290.1
Length = 205
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/79 (63%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
Query: 38 DDSKALVVVPEKTPVPENKPSSKGSLDRDVALAELEKEKRLSYVKAWEESEKSKTENKAQ 97
D+SKALV+V + V E KP+ +GS++RD LA + EKRLS +KAWEESEKSK ENKA
Sbjct: 58 DESKALVLVEKTQEVAEVKPT-EGSVNRDAVLARVATEKRLSLIKAWEESEKSKAENKAH 116
Query: 98 KNLSDVVEWENSKKAALEA 116
K LS V WENSKKAA+EA
Sbjct: 117 KKLSSVSAWENSKKAAVEA 135
>Glyma16g31290.2
Length = 160
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 47 PEKTPVPENKPSSKGSLDRDVALAELEKEKRLSYVKAWEESEKSKTENKAQKNLSDVVEW 106
PE V E KP+ +GS++RD LA + EKRLS +KAWEESEKSK ENKA K LS V W
Sbjct: 22 PETQEVAEVKPT-EGSVNRDAVLARVATEKRLSLIKAWEESEKSKAENKAHKKLSSVSAW 80
Query: 107 ENSKKAALEA 116
ENSKKAA+EA
Sbjct: 81 ENSKKAAVEA 90
>Glyma08g01590.2
Length = 171
Score = 80.5 bits (197), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 57/81 (70%), Gaps = 5/81 (6%)
Query: 43 LVVVPEKTPVPENKPSSKGSLDRDVALAELEKEKRLSYVKAWEESEKSKTENKAQKNLSD 102
L ++P T + SK S+DRD LA +E EKRL+ ++AWEESEK+K EN+A K +
Sbjct: 30 LNLIPTTT-----RTDSKDSVDRDAVLARVESEKRLALIRAWEESEKTKAENRAYKRHNA 84
Query: 103 VVEWENSKKAALEAQLRKIEE 123
VV WENSKKA+ EA L++IEE
Sbjct: 85 VVLWENSKKASAEAHLKRIEE 105
>Glyma08g01590.1
Length = 194
Score = 79.7 bits (195), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 52/68 (76%)
Query: 56 KPSSKGSLDRDVALAELEKEKRLSYVKAWEESEKSKTENKAQKNLSDVVEWENSKKAALE 115
+ SK S+DRD LA +E EKRL+ ++AWEESEK+K EN+A K + VV WENSKKA+ E
Sbjct: 61 RTDSKDSVDRDAVLARVESEKRLALIRAWEESEKTKAENRAYKRHNAVVLWENSKKASAE 120
Query: 116 AQLRKIEE 123
A L++IEE
Sbjct: 121 AHLKRIEE 128
>Glyma07g07970.4
Length = 107
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/61 (70%), Positives = 49/61 (80%), Gaps = 3/61 (4%)
Query: 38 DDSKALVVVP---EKTPVPENKPSSKGSLDRDVALAELEKEKRLSYVKAWEESEKSKTEN 94
+++KALVVV EK P P K +S GSLDRD+ALAE+EKEKRLS VKAWEESEKSK EN
Sbjct: 47 EETKALVVVEKENEKIPEPVKKNASGGSLDRDIALAEIEKEKRLSNVKAWEESEKSKAEN 106
Query: 95 K 95
K
Sbjct: 107 K 107
>Glyma07g07970.3
Length = 107
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/61 (70%), Positives = 49/61 (80%), Gaps = 3/61 (4%)
Query: 38 DDSKALVVVP---EKTPVPENKPSSKGSLDRDVALAELEKEKRLSYVKAWEESEKSKTEN 94
+++KALVVV EK P P K +S GSLDRD+ALAE+EKEKRLS VKAWEESEKSK EN
Sbjct: 47 EETKALVVVEKENEKIPEPVKKNASGGSLDRDIALAEIEKEKRLSNVKAWEESEKSKAEN 106
Query: 95 K 95
K
Sbjct: 107 K 107
>Glyma11g02740.2
Length = 190
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 50/62 (80%)
Query: 62 SLDRDVALAELEKEKRLSYVKAWEESEKSKTENKAQKNLSDVVEWENSKKAALEAQLRKI 121
S+D+D LA++ EKRL+ +KAWEESEK+K EN+A K S V WE+SKKA++EAQL+KI
Sbjct: 64 SVDKDAMLAKVLTEKRLALIKAWEESEKTKAENRAYKKHSAVGLWEDSKKASVEAQLKKI 123
Query: 122 EE 123
EE
Sbjct: 124 EE 125
>Glyma11g02740.1
Length = 215
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 46/58 (79%)
Query: 66 DVALAELEKEKRLSYVKAWEESEKSKTENKAQKNLSDVVEWENSKKAALEAQLRKIEE 123
D LA++ EKRL+ +KAWEESEK+K EN+A K S V WE+SKKA++EAQL+KIEE
Sbjct: 93 DAMLAKVLTEKRLALIKAWEESEKTKAENRAYKKHSAVGLWEDSKKASVEAQLKKIEE 150
>Glyma05g37990.1
Length = 122
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 41/52 (78%)
Query: 72 LEKEKRLSYVKAWEESEKSKTENKAQKNLSDVVEWENSKKAALEAQLRKIEE 123
E EKRL+ ++AWEESEK+K EN+A K + VV WENSKKA+ EA L++IEE
Sbjct: 6 FESEKRLALIRAWEESEKTKAENRAYKRHNAVVLWENSKKASAEAHLKRIEE 57
>Glyma01g42700.1
Length = 129
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 41/62 (66%), Gaps = 7/62 (11%)
Query: 69 LAELEKEKRLSYVKAWEESEKSKTEN-------KAQKNLSDVVEWENSKKAALEAQLRKI 121
LA + EKRL+ VKAWEE + ++ KA K LS V WE+SKKA++EAQL+KI
Sbjct: 3 LARVVTEKRLALVKAWEEIGCNFDQDEYVLVLYKAYKRLSAVGFWEDSKKASVEAQLKKI 62
Query: 122 EE 123
EE
Sbjct: 63 EE 64