Miyakogusa Predicted Gene

Lj1g3v2627570.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2627570.1 tr|Q6AWV5|Q6AWV5_ARATH At4g00525 OS=Arabidopsis
thaliana GN=At4g00525 PE=2 SV=1,42.4,1e-18, ,CUFF.29345.1
         (140 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g39780.1                                                       164   3e-41
Glyma18g46410.1                                                       157   2e-39
Glyma09g39780.2                                                        56   1e-08

>Glyma09g39780.1 
          Length = 134

 Score =  164 bits (415), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 82/110 (74%), Positives = 88/110 (80%), Gaps = 3/110 (2%)

Query: 29  MAHKILEYRETLPDQLKSTLVSVLDAHRPLLPQLNPGASEQNISREESSSAPEDPETAXX 88
           MAHKIL+YR TLPDQL STL S+LDA RP L   +PGASEQNISREESSSAPEDPETA  
Sbjct: 28  MAHKILDYRTTLPDQLNSTLRSILDAQRPFL---SPGASEQNISREESSSAPEDPETAKI 84

Query: 89  XXXXXXXISSNCSAMPIVLNRMKDCIAKIDKLDSYNAASIHPAFKKKNTG 138
                  ISSNCSAMPIVL RMKDCIA+I+K DSYN A IHPAFK+K TG
Sbjct: 85  LKLLNEKISSNCSAMPIVLKRMKDCIARIEKFDSYNDAMIHPAFKRKKTG 134


>Glyma18g46410.1 
          Length = 133

 Score =  157 bits (398), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 77/110 (70%), Positives = 86/110 (78%), Gaps = 3/110 (2%)

Query: 29  MAHKILEYRETLPDQLKSTLVSVLDAHRPLLPQLNPGASEQNISREESSSAPEDPETAXX 88
           MAH+IL+YR  LPDQL +TL S+LDA RP L   +PG SEQNISREESSSAPEDPETA  
Sbjct: 27  MAHRILDYRTKLPDQLNATLRSILDAQRPFL---SPGTSEQNISREESSSAPEDPETAKK 83

Query: 89  XXXXXXXISSNCSAMPIVLNRMKDCIAKIDKLDSYNAASIHPAFKKKNTG 138
                  ISSNCSAMPIVL RMKDCIA+I+K DSYN + IHPAFK+K TG
Sbjct: 84  LKLLNEKISSNCSAMPIVLKRMKDCIARIEKFDSYNDSMIHPAFKRKKTG 133


>Glyma09g39780.2 
          Length = 87

 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/39 (71%), Positives = 31/39 (79%), Gaps = 3/39 (7%)

Query: 29 MAHKILEYRETLPDQLKSTLVSVLDAHRPLLPQLNPGAS 67
          MAHKIL+YR TLPDQL STL S+LDA RP    L+PGAS
Sbjct: 28 MAHKILDYRTTLPDQLNSTLRSILDAQRPF---LSPGAS 63