Miyakogusa Predicted Gene

Lj1g3v2627520.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2627520.1 tr|B9I7N6|B9I7N6_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_571524 PE=4 SV=1,46.67,4e-17,
,gene.g33423.t1.1
         (272 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g11860.1                                                       160   2e-39
Glyma08g42610.1                                                       141   9e-34
Glyma10g09670.1                                                       137   1e-32
Glyma08g42590.1                                                       100   1e-21
Glyma18g11890.1                                                        51   2e-06
Glyma18g34370.1                                                        50   2e-06
Glyma08g38010.1                                                        50   2e-06

>Glyma18g11860.1 
          Length = 572

 Score =  160 bits (404), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 74/102 (72%), Positives = 83/102 (81%), Gaps = 1/102 (0%)

Query: 1   MQFRMNQDVPGHVPVFNGTKAIAWENYCRPISDRNLYLPSRLFEADVTTRYASWWKQSVL 60
           MQF M+QDVPG VP F+GT+AIAW+NYCR ISDR+LY P+RLFE DVTTRYA WWKQSVL
Sbjct: 395 MQFGMDQDVPGRVPTFHGTEAIAWKNYCRTISDRSLYFPARLFEGDVTTRYAMWWKQSVL 454

Query: 61  -HHQDFAKNIVRWKRSARPSKRGPHVVKANRSGNDADAPPLF 101
             H DFAKNIV+ KRS RP   GPHV+KAN+ G DAD PP F
Sbjct: 455 CRHHDFAKNIVQRKRSLRPPPHGPHVLKANKKGYDADVPPGF 496


>Glyma08g42610.1 
          Length = 580

 Score =  141 bits (355), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 97/244 (39%), Positives = 121/244 (49%), Gaps = 83/244 (34%)

Query: 1   MQFRMNQDVPGHVPVFNGTKAIAWENYCRPISDRNLYLPSRLFEADVTTRYASWWKQSV- 59
           MQF M+QDVP  +P F+GTK  AW+NYCRPISDR+LY P+RLFE D+TTRYA WWK+S+ 
Sbjct: 368 MQFGMDQDVPSCLPRFDGTKDFAWKNYCRPISDRSLYFPARLFEGDITTRYAKWWKRSLM 427

Query: 60  --------LHHQDFAKNIVRWKRSARPSKRGPHVVKANRSGNDADAPPLFPPKLDVSTVI 111
                   + HQDFAKNIVR KRS     R P V KAN++GN                  
Sbjct: 428 GHQDFAKNMGHQDFAKNIVRRKRSP----RSPQVSKANKNGN------------------ 465

Query: 112 LKKSCDDGLKTVKVENDADVPSGFLPKHLRAVPFGNSVQVGFKANENTVDFPTSLPPKHD 171
                DD     K  +D D PSGFL K                   +T ++         
Sbjct: 466 ----VDDDSNARKRNSDVDAPSGFLLK------------------PSTAEY--------- 494

Query: 172 ALSPCIYVENSKPVLEEYNCGGMAHSLANVATYEYNTVTSL-GSLKEDFEDANGNKESML 230
                   EN K +        +   LA       +TV  L G L+EDFEDANG+KES L
Sbjct: 495 --------ENVKRI------SPLTKLLAK------DTVEPLMGRLEEDFEDANGSKESRL 534

Query: 231 STDK 234
           S+++
Sbjct: 535 SSER 538


>Glyma10g09670.1 
          Length = 548

 Score =  137 bits (346), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 80/138 (57%), Positives = 92/138 (66%), Gaps = 13/138 (9%)

Query: 1   MQFRMNQDVPGHVPVFNGTKAIAWENYCRPISDRNLYLPSRLFEADVTTRYASWWKQSVL 60
           MQF M+QDVP  VP+F GTK  AW+NYCRPISD +LY P+RLFE DVTTRYA+WWKQ V 
Sbjct: 404 MQFGMDQDVPSCVPIFRGTKENAWKNYCRPISDTHLYFPARLFEGDVTTRYATWWKQLVP 463

Query: 61  H-HQDFAKNIVRWKRSARPSKRGPHVVKANR-SGNDADAPPLFPPKLDVSTVILKKSCDD 118
             H+DF KNIVR KRS        HV KAN+ SGNDAD PP F P     T+    S  D
Sbjct: 464 SCHRDFVKNIVRRKRSLM-----SHVSKANKNSGNDADVPPGFSPS---KTLPSGNSGQD 515

Query: 119 GLKTVKVEN-DADVPSGF 135
            L+    EN DAD+P+ F
Sbjct: 516 DLQA--NENIDADIPTRF 531


>Glyma08g42590.1 
          Length = 322

 Score =  100 bits (250), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 89/230 (38%), Positives = 111/230 (48%), Gaps = 30/230 (13%)

Query: 18  GTKAIAWENYCRPISDR-NLYLPSRLFEADVTTRYASWWKQSVLHHQDFAKNIVRWKRSA 76
           G KA+  +    P   R  ++L   L E     RYA WWK++V  HQDFAKNIV+   S 
Sbjct: 61  GLKALLGKITAGPYLIRVCIFLLGILREMLPHARYAKWWKKTVPSHQDFAKNIVQSGGSP 120

Query: 77  RPSKRGPHVVKANRSGNDADAPPLFPPKLDVSTVILKKSCDDGLKTVKVENDADVPSGFL 136
           +     PHV KAN +GNDAD PP F PK  VSTV   KS  D     K  +DAD PSGFL
Sbjct: 121 KSPHSAPHVSKANTNGNDADFPPGFLPK-PVSTVYFGKSGKDHSNARKGNSDADAPSGFL 179

Query: 137 PKHLRAVPFGNSVQVGFKANENTVDFPTSLPPKHDALSPCIYVENSKPVLEEYNCGGMAH 196
            K L+    GNS Q G K  E  +D    +P      + C  + N               
Sbjct: 180 -KSLKTATSGNSYQDGLKDKEK-IDTNGDVP------TICKNLSNQ-------------S 218

Query: 197 SLANVATYE----YNTVTSLGSLKEDFEDANGNKESMLSTDKVRRSGIQA 242
           S A+ A YE     + +T L S K+  E   G  ES LS+++V  SG Q 
Sbjct: 219 SSASTAVYENIKRKSPLTKLVS-KDTVEPLMG--ESRLSSERVSLSGTQG 265


>Glyma18g11890.1 
          Length = 577

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 4/59 (6%)

Query: 1   MQFRMNQDVPGHVPVFNGTKAIAWENYCRPISDRNLYLP-SRLFEADVTTRYASWWKQS 58
           MQF M+QD+PG +  +N      W +Y +P+ D NLY       + +VT+RY  WWKQS
Sbjct: 396 MQFGMDQDIPGMLAHYNDN---PWISYSQPVMDTNLYTALCACHQPNVTSRYYRWWKQS 451


>Glyma18g34370.1 
          Length = 140

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/29 (79%), Positives = 24/29 (82%), Gaps = 1/29 (3%)

Query: 42  LFEADVTTRYASWWKQSVL-HHQDFAKNI 69
            FE DVTTRYA WWKQS+L HH DFAKNI
Sbjct: 110 FFEGDVTTRYARWWKQSILYHHCDFAKNI 138


>Glyma08g38010.1 
          Length = 261

 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/31 (70%), Positives = 25/31 (80%), Gaps = 1/31 (3%)

Query: 42  LFEADVTTRYASWWKQSVL-HHQDFAKNIVR 71
            +E DVTTRYA WWKQ +L HH+DFAKNI R
Sbjct: 138 FYEGDVTTRYARWWKQPILYHHRDFAKNISR 168