Miyakogusa Predicted Gene

Lj1g3v2626350.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2626350.1 Non Chatacterized Hit- tr|I3TAG0|I3TAG0_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,50,4e-19,seg,NULL,CUFF.29332.1
         (107 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g25620.1                                                        94   4e-20
Glyma11g06820.1                                                        60   4e-10
Glyma02g06590.1                                                        53   8e-08
Glyma02g35970.1                                                        53   9e-08
Glyma19g32660.1                                                        52   2e-07

>Glyma16g25620.1 
          Length = 367

 Score = 93.6 bits (231), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 54/112 (48%), Positives = 69/112 (61%), Gaps = 12/112 (10%)

Query: 1   MSFVNLNTWARPSFVMNHAT--RSRS-PTFYLFHGLRKIR--ISPIIPAKPQRYQLCSSS 55
           MS VNLNTW RPSF++N     RSRS PT + FHG+ K+   IS +  AK        S 
Sbjct: 1   MSAVNLNTWPRPSFILNQTATRRSRSSPTSHFFHGVNKLPSPISSLTVAK-------RSF 53

Query: 56  TVSAVMXXXXXXXXXXXXXXFNFKSYMIQKATQVNQALDDAVSLQDPLKIHE 107
           T+SAV+              F+FK+YM+ KA+ VN+ALDDAVSL++P KIHE
Sbjct: 54  TLSAVLTKEDTVETEEKPPIFDFKNYMVSKASAVNKALDDAVSLREPQKIHE 105


>Glyma11g06820.1 
          Length = 369

 Score = 60.5 bits (145), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/111 (34%), Positives = 51/111 (45%), Gaps = 8/111 (7%)

Query: 1   MSFVNLNTWARPSFVMNHATRSRSPTFYLFHGLRKIRISPII----PAKPQRYQLCSSST 56
           MS +NL TW RP+ ++N  +    P    FH L      P +    P     + L S+  
Sbjct: 1   MSSLNLGTWPRPTSMLNTPSHLLPP----FHTLTLTTTLPKLASGTPKLISSFPLVSAVP 56

Query: 57  VSAVMXXXXXXXXXXXXXXFNFKSYMIQKATQVNQALDDAVSLQDPLKIHE 107
                              F+FK YMI KA  VNQALD A++L+DP KIH+
Sbjct: 57  TKEHTVTTQEIQLQDTPLNFDFKGYMIAKAHTVNQALDAAIALRDPHKIHQ 107


>Glyma02g06590.1 
          Length = 350

 Score = 52.8 bits (125), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 19/107 (17%)

Query: 1   MSFVNLNTWARPSFVMNHATRSRSPTFYLFHGLRKIRISPIIPAKPQRYQLCSSSTVSAV 60
           MS +NLN W RP       + +       FH + K+   P      +R     + ++SAV
Sbjct: 1   MSALNLNAWPRPRSRSRSRSPT-------FHAVNKL---PFFTVTKRR-----AFSLSAV 45

Query: 61  MXXXXXXXXXXXXXXFNFKSYMIQKATQVNQALDDAVSLQDPLKIHE 107
           +              F+FK+YM+ KA+ VN+ALDD+VSL++P KIHE
Sbjct: 46  LTVETEEKPPI----FDFKNYMLSKASAVNKALDDSVSLREPKKIHE 88


>Glyma02g35970.1 
          Length = 169

 Score = 52.8 bits (125), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 23/32 (71%), Positives = 26/32 (81%)

Query: 76  FNFKSYMIQKATQVNQALDDAVSLQDPLKIHE 107
           FNFK YMI KA  VNQALD A++L+DP KIHE
Sbjct: 28  FNFKGYMIAKAHTVNQALDTAIALRDPHKIHE 59


>Glyma19g32660.1 
          Length = 343

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 13/86 (15%)

Query: 22  SRSPTFYLFHGLRKIRISPIIPAKPQRYQLCSSSTVSAVMXXXXXXXXXXXXXXFNFKSY 81
           +RSP    FH LR +      P  P+R      S+V++ +              F+FK+Y
Sbjct: 4   TRSPLIPCFHTLRTV------PVSPKREWPKLFSSVNSTLPFSSAPN-------FDFKAY 50

Query: 82  MIQKATQVNQALDDAVSLQDPLKIHE 107
           M+ K   VN+ALD AV+L++P K+HE
Sbjct: 51  MLDKINTVNRALDAAVALREPRKLHE 76