Miyakogusa Predicted Gene

Lj1g3v2626080.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2626080.1 Non Chatacterized Hit- tr|I3SZH1|I3SZH1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.15,0.000000000000003,FBOX,F-box domain, cyclin-like;
F-box,F-box domain, cyclin-like; seg,NULL; no description,NULL;
F-bo,NODE_67840_length_169_cov_15.147929.path1.1
         (53 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g02100.1                                                        54   3e-08
Glyma03g26910.1                                                        54   4e-08
Glyma08g27850.1                                                        51   3e-07
Glyma06g21240.1                                                        50   5e-07
Glyma08g10360.1                                                        50   6e-07
Glyma07g17970.1                                                        49   2e-06
Glyma08g27950.1                                                        48   2e-06
Glyma15g10840.1                                                        47   3e-06
Glyma07g37650.1                                                        47   3e-06
Glyma13g28210.1                                                        47   4e-06
Glyma06g13220.1                                                        46   9e-06

>Glyma17g02100.1 
          Length = 394

 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 26/40 (65%), Positives = 31/40 (77%)

Query: 13 AENPSLSSVLLPDELIEAILVRLPVSSLLRFKSVCKSWLS 52
          A+N +   V LP ELI  IL+RLPV SL+RFK+VCKSWLS
Sbjct: 22 AQNENEKMVDLPQELIHEILLRLPVKSLIRFKTVCKSWLS 61


>Glyma03g26910.1 
          Length = 355

 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 25/40 (62%), Positives = 31/40 (77%)

Query: 14 ENPSLSSVLLPDELIEAILVRLPVSSLLRFKSVCKSWLSV 53
           N +L++ + P ELI AIL+ LPV S+LRFK VCKSWLSV
Sbjct: 3  RNATLAATIFPGELIGAILLWLPVRSVLRFKCVCKSWLSV 42


>Glyma08g27850.1 
          Length = 337

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/34 (70%), Positives = 27/34 (79%)

Query: 20 SVLLPDELIEAILVRLPVSSLLRFKSVCKSWLSV 53
          SV LP ELI  IL+R PV S+LRFK VCKSWLS+
Sbjct: 7  SVTLPLELIREILLRSPVRSVLRFKCVCKSWLSL 40


>Glyma06g21240.1 
          Length = 287

 Score = 50.1 bits (118), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 21/35 (60%), Positives = 29/35 (82%)

Query: 19 SSVLLPDELIEAILVRLPVSSLLRFKSVCKSWLSV 53
          ++  +PD+++E IL+RLPV  LLRFK VCKSWLS+
Sbjct: 3  NNFTIPDDMMEEILLRLPVKCLLRFKYVCKSWLSL 37


>Glyma08g10360.1 
          Length = 363

 Score = 49.7 bits (117), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 22/31 (70%), Positives = 27/31 (87%)

Query: 21 VLLPDELIEAILVRLPVSSLLRFKSVCKSWL 51
          ++LP +LI  IL+RLPV SL+RFKSVCKSWL
Sbjct: 1  MVLPQDLITEILLRLPVKSLVRFKSVCKSWL 31


>Glyma07g17970.1 
          Length = 225

 Score = 48.5 bits (114), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/31 (74%), Positives = 26/31 (83%)

Query: 23 LPDELIEAILVRLPVSSLLRFKSVCKSWLSV 53
          LP ELIE IL+RLPV S+LRFK VCKSW S+
Sbjct: 3  LPLELIEEILLRLPVRSILRFKCVCKSWFSL 33


>Glyma08g27950.1 
          Length = 400

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/31 (67%), Positives = 26/31 (83%)

Query: 23 LPDELIEAILVRLPVSSLLRFKSVCKSWLSV 53
          LP ELI  +L+RLPV S+LRF+ VCKSWLS+
Sbjct: 8  LPLELIREVLLRLPVRSVLRFRCVCKSWLSL 38


>Glyma15g10840.1 
          Length = 405

 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 21/32 (65%), Positives = 26/32 (81%)

Query: 22 LLPDELIEAILVRLPVSSLLRFKSVCKSWLSV 53
           LPDEL+  IL RLPV SLL+F+ VCKSW+S+
Sbjct: 48 FLPDELVVEILSRLPVKSLLQFRCVCKSWMSL 79


>Glyma07g37650.1 
          Length = 379

 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/34 (70%), Positives = 27/34 (79%)

Query: 20 SVLLPDELIEAILVRLPVSSLLRFKSVCKSWLSV 53
          +V LP ELI  IL+RLPV SLLRFK V KSWLS+
Sbjct: 15 TVFLPQELIIQILLRLPVKSLLRFKCVSKSWLSL 48


>Glyma13g28210.1 
          Length = 406

 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 21/32 (65%), Positives = 26/32 (81%)

Query: 22 LLPDELIEAILVRLPVSSLLRFKSVCKSWLSV 53
           LPDEL+  IL RLPV SLL+F+ VCKSW+S+
Sbjct: 48 FLPDELVVEILSRLPVKSLLQFRCVCKSWMSL 79


>Glyma06g13220.1 
          Length = 376

 Score = 45.8 bits (107), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 22/31 (70%), Positives = 25/31 (80%)

Query: 21 VLLPDELIEAILVRLPVSSLLRFKSVCKSWL 51
           +LP ELI  IL+RLPV SL+RFK VCKSWL
Sbjct: 16 AILPWELIIEILLRLPVKSLVRFKCVCKSWL 46