Miyakogusa Predicted Gene

Lj1g3v2624830.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2624830.1 Non Chatacterized Hit- tr|I1L6Q0|I1L6Q0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.38012
PE,81.03,0,RrnaAD,Ribosomal RNA adenine methylase transferase;
Ribosomal RNA adenine dimethylases,Ribosomal RNA,CUFF.29306.1
         (348 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g40000.1                                                       555   e-158
Glyma18g46220.1                                                       545   e-155
Glyma01g37520.1                                                        91   2e-18
Glyma13g18570.1                                                        89   8e-18
Glyma06g47390.1                                                        88   1e-17
Glyma11g07770.1                                                        49   8e-06

>Glyma09g40000.1 
          Length = 341

 Score =  555 bits (1431), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 278/348 (79%), Positives = 301/348 (86%), Gaps = 7/348 (2%)

Query: 1   MFPSALCYLQTLPPIPNATALNHHREPPPTVPYSTAGARRRRLHVVCAGGGGRPSTRSAD 60
           M PS+LC LQ  PPI +A  LN H +P      STAG R R  +VV +      STRSAD
Sbjct: 1   MSPSSLCSLQASPPISHAL-LNRHHKPAHD---STAGVRNRTPYVVSSERSSTASTRSAD 56

Query: 61  DYNATLRALNSKGRFPRKSLGQHYMLNSEINEQLAGVAGIQQGDVVLEIGPGTGSLTNIL 120
           DY+ATL+ALNSKGRFPRKSLGQHYMLN++IN+QLAG AG++QGDVVLEIGPGTGSLTN+L
Sbjct: 57  DYHATLKALNSKGRFPRKSLGQHYMLNADINDQLAGAAGVEQGDVVLEIGPGTGSLTNVL 116

Query: 121 LDSGAFVLAVEKDKHMAALVCERFSSTGKLKVLTEDIVKCHVRSHMSSLVGSTKQTDPET 180
           L+SGAFVLAVEKDKHMAALV ERFSSTGKLKVLTEDIVKCHVRSHMSSLVGS    +PE+
Sbjct: 117 LNSGAFVLAVEKDKHMAALVSERFSSTGKLKVLTEDIVKCHVRSHMSSLVGSI---NPES 173

Query: 181 RNAKVVANIPFNISTDVVKLLLPMGDIFSEVVLLLQEETAVRLVVSSLRTSEYRPINIFV 240
           R AKVVANIPFNISTDV+KLLLPMGDIFSEVVLLLQEETAVRLVVSSLRT EYRP+N+FV
Sbjct: 174 RKAKVVANIPFNISTDVIKLLLPMGDIFSEVVLLLQEETAVRLVVSSLRTPEYRPVNVFV 233

Query: 241 NYYSDPEYKFKVPRANFFPQPNVDAAVVSFKLKLPSEYPQVXXXXXXXXMVNSGFNEKRK 300
           N+YSDPEYK KVPR+NFFPQPNVDAAVVSFKLKLPSEYPQV        MVNS FNEKRK
Sbjct: 234 NFYSDPEYKLKVPRSNFFPQPNVDAAVVSFKLKLPSEYPQVSSTKSFFSMVNSAFNEKRK 293

Query: 301 MLRKSLQHICTSLEIEEALKSLGLQPTSRPEELTLDDFVKLHNLISKE 348
           MLRKSLQHICTSLEIEEAL S+GL  TSRPEELTLDDFVKLHNLI+KE
Sbjct: 294 MLRKSLQHICTSLEIEEALTSIGLLATSRPEELTLDDFVKLHNLIAKE 341


>Glyma18g46220.1 
          Length = 322

 Score =  545 bits (1405), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 273/348 (78%), Positives = 293/348 (84%), Gaps = 26/348 (7%)

Query: 1   MFPSALCYLQTLPPIPNATALNHHREPPPTVPYSTAGARRRRLHVVCAGGGGRPSTRSAD 60
           M PS+LC LQT                       TAG RRR  +VVCA  G R STRSAD
Sbjct: 1   MSPSSLCSLQT-----------------------TAGVRRRTPYVVCAEKGSRASTRSAD 37

Query: 61  DYNATLRALNSKGRFPRKSLGQHYMLNSEINEQLAGVAGIQQGDVVLEIGPGTGSLTNIL 120
           DY+ATL+ALNSKGRFPRKSLGQHYMLN++IN+QLAG AG++QGDVVLEIGPGTGSLTN+L
Sbjct: 38  DYHATLKALNSKGRFPRKSLGQHYMLNADINDQLAGAAGVEQGDVVLEIGPGTGSLTNVL 97

Query: 121 LDSGAFVLAVEKDKHMAALVCERFSSTGKLKVLTEDIVKCHVRSHMSSLVGSTKQTDPET 180
           L+SGAFVLAVEKDKHMAALV ERFSSTGKLKVLTEDIVKCHVRSHMSSLVGS    +PE+
Sbjct: 98  LNSGAFVLAVEKDKHMAALVSERFSSTGKLKVLTEDIVKCHVRSHMSSLVGSI---NPES 154

Query: 181 RNAKVVANIPFNISTDVVKLLLPMGDIFSEVVLLLQEETAVRLVVSSLRTSEYRPINIFV 240
           R AKVVANIPFNISTDV+KLLLPMGDIFSEVVLLLQEETAVRLVVSSLRT EYRPIN+FV
Sbjct: 155 RKAKVVANIPFNISTDVIKLLLPMGDIFSEVVLLLQEETAVRLVVSSLRTPEYRPINVFV 214

Query: 241 NYYSDPEYKFKVPRANFFPQPNVDAAVVSFKLKLPSEYPQVXXXXXXXXMVNSGFNEKRK 300
           N+YS PEYK +VPR NFFPQPNVDAAVVSFKLKLPSEYPQV        MVNS FNEKRK
Sbjct: 215 NFYSGPEYKLEVPRTNFFPQPNVDAAVVSFKLKLPSEYPQVSSTKSFFSMVNSAFNEKRK 274

Query: 301 MLRKSLQHICTSLEIEEALKSLGLQPTSRPEELTLDDFVKLHNLISKE 348
           MLRKSLQHICTSLEIEEAL S+GL  T+RPEELTLDDFVKLHNLI+KE
Sbjct: 275 MLRKSLQHICTSLEIEEALTSIGLLATARPEELTLDDFVKLHNLIAKE 322


>Glyma01g37520.1 
          Length = 345

 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 98/199 (49%), Gaps = 20/199 (10%)

Query: 78  KSLGQHYMLNSEINEQLAGVAGIQQGDVVLEIGPGTGSLTNILLDSGAFVLAVEKDKHMA 137
           KS GQH  +N  I + +   + I   D VLEIGPGTG+LT  LL++   V+A+E D  M 
Sbjct: 40  KSRGQHIFINPRILDTIFRRSAINPTDTVLEIGPGTGNLTLKLLEAAHKVVAIEIDHRMV 99

Query: 138 ALVCERFSSTG---KLKVLTEDIVKCHVRSHMSSLVGSTKQTDPETRNAKVVANIPFNIS 194
            ++ +R    G   KL+V+  D ++                  P  R   VVANIP+ IS
Sbjct: 100 QVLEKRVLQRGLQDKLRVIERDAMRA-----------------PFPRFDLVVANIPYRIS 142

Query: 195 TDVVKLLLPMGDIFSEVVLLLQEETAVRLVVSSLRTSEYRPINIFVNYYSDPEYKFKVPR 254
           + +V  L+     F    LLLQ+E A RL+     +  +  ++  V   +D E    V +
Sbjct: 143 SPLVIKLVYGATPFRSATLLLQKEFARRLLTCPGDSGGFNRLSANVKLVADVELVMDVSK 202

Query: 255 ANFFPQPNVDAAVVSFKLK 273
            +F P P VD++VV  + K
Sbjct: 203 RDFLPSPKVDSSVVIIRPK 221


>Glyma13g18570.1 
          Length = 352

 Score = 89.0 bits (219), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 98/201 (48%), Gaps = 21/201 (10%)

Query: 78  KSLGQHYMLNSEINEQLAGVAGIQQGDVVLEIGPGTGSLTNILLDSGAFVLAVEKDKHMA 137
           KS GQH + N  + + +   AG++  DV+LEIGPGTG+LT  LL++G  V+AVE D  M 
Sbjct: 30  KSKGQHILKNPLLVDSIVEKAGVKSTDVILEIGPGTGNLTKKLLEAGKKVIAVEIDPRMV 89

Query: 138 ALVCERFSST---GKLKVLTEDIVKCHVRSHMSSLVGSTKQTDPETRNAKVVANIPFNIS 194
             +  RF  T    +L V+  D++K  +                       VANIP+ IS
Sbjct: 90  LELQRRFQGTPHSNRLTVIQGDVLKTELPYF-----------------DICVANIPYQIS 132

Query: 195 TDVVKLLLPMGDIFSEVVLLLQEETAVRLVVSSLRTSEYRPINIFVNYYSDPEYKFKVPR 254
           + +   LL     F   +++ Q E A+RLV        Y  + +    ++   +  KV R
Sbjct: 133 SPLTFKLLKHEPAFRAAIIMFQREFAMRLVAQP-GDKLYCRLTVNTQLHARVFHLLKVGR 191

Query: 255 ANFFPQPNVDAAVVSFKLKLP 275
            NF P P VD++VV  + + P
Sbjct: 192 NNFRPPPKVDSSVVRIEPRKP 212


>Glyma06g47390.1 
          Length = 333

 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 98/201 (48%), Gaps = 21/201 (10%)

Query: 78  KSLGQHYMLNSEINEQLAGVAGIQQGDVVLEIGPGTGSLTNILLDSGAFVLAVEKDKHMA 137
           KS GQH + N  + + +   AG++  DV+LEIGPGTG+LT  LL++G  V+A+E D  M 
Sbjct: 11  KSKGQHILKNPLLVDSIVEKAGVKSTDVILEIGPGTGNLTKKLLEAGKKVIAIEIDPRMV 70

Query: 138 ALVCERFSST---GKLKVLTEDIVKCHVRSHMSSLVGSTKQTDPETRNAKVVANIPFNIS 194
             +  RF  T    +L V+  D++K  +                       VANIP+ IS
Sbjct: 71  LELQRRFQGTPHSNRLTVIQGDVLKTELPYF-----------------DICVANIPYQIS 113

Query: 195 TDVVKLLLPMGDIFSEVVLLLQEETAVRLVVSSLRTSEYRPINIFVNYYSDPEYKFKVPR 254
           + +   LL     F   +++ Q E A+RLV        Y  + +    ++   +  KV R
Sbjct: 114 SPLTFKLLKHEPAFRAAIIMFQREFAMRLVAQP-GDKLYCRLTVNTQLHARVFHLLKVGR 172

Query: 255 ANFFPQPNVDAAVVSFKLKLP 275
            NF P P VD++VV  + + P
Sbjct: 173 NNFRPPPKVDSSVVRIEPRKP 193


>Glyma11g07770.1 
          Length = 248

 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 47/91 (51%)

Query: 178 PETRNAKVVANIPFNISTDVVKLLLPMGDIFSEVVLLLQEETAVRLVVSSLRTSEYRPIN 237
           P  R   VVANIP+ IS+ +V  L+     F    LLLQ+E A RL+     +  +  ++
Sbjct: 29  PFPRFDLVVANIPYRISSPLVIKLVYGATPFRSATLLLQKEFARRLLACPGDSGGFNRLS 88

Query: 238 IFVNYYSDPEYKFKVPRANFFPQPNVDAAVV 268
             V   +D E    V + +F P P VD++VV
Sbjct: 89  ANVKLVADVELVMDVSKRDFLPSPKVDSSVV 119