Miyakogusa Predicted Gene

Lj1g3v2624810.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2624810.1 Non Chatacterized Hit- tr|D7U7K5|D7U7K5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,48.62,5e-19,seg,NULL,CUFF.29304.1
         (121 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g46210.1                                                        78   3e-15
Glyma09g40010.1                                                        50   7e-07

>Glyma18g46210.1 
          Length = 160

 Score = 77.8 bits (190), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 51/110 (46%), Positives = 61/110 (55%)

Query: 10  SLAELIESLEQATFMAKQLXXXXXTNPTNLHQIXXXXXXXXXXXXVFLSTLHPPPAPENS 69
           S+ +LI SL+QATFMAKQL      NPT+LHQI            VFL+ L  PP    S
Sbjct: 7   SIQDLIFSLQQATFMAKQLLPSSTNNPTHLHQIHSSLHHAHRHLSVFLAALPSPPPAAES 66

Query: 70  VSSANGAATQPXXXXXXXXEETSKCAIENVEQKMKDCFIKNKRPKRRLSP 119
            ++                E TSKC I+ VE+KM+ CFIKNKRPKR LSP
Sbjct: 67  SATDAEPMQVEDGGDGDDEETTSKCIIDKVEEKMRHCFIKNKRPKRPLSP 116


>Glyma09g40010.1 
          Length = 97

 Score = 49.7 bits (117), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 22/31 (70%), Positives = 25/31 (80%)

Query: 89  EETSKCAIENVEQKMKDCFIKNKRPKRRLSP 119
           E TSKC I+ VE+KM+ CFIKNKRPKR L P
Sbjct: 26  ETTSKCTIDKVEEKMRHCFIKNKRPKRPLLP 56