Miyakogusa Predicted Gene

Lj1g3v2595920.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2595920.1 tr|O64632|O64632_ARATH Expressed protein
OS=Arabidopsis thaliana GN=At2g45520 PE=2 SV=1,44.92,7e-19,seg,NULL;
coiled-coil,NULL,CUFF.29388.1
         (180 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g40370.1                                                       160   7e-40

>Glyma09g40370.1 
          Length = 230

 Score =  160 bits (405), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 96/194 (49%), Positives = 112/194 (57%), Gaps = 18/194 (9%)

Query: 1   MGGKGQRRREKNYKAAHGGYSGLPPPPVLSQLDALPSKLRQLISITRHQNGATAASELKK 60
           MGGKG+RRREKNY+AAHGGY+GLPPPP  S+ DALPSKLRQ+IS T++  GA   S  KK
Sbjct: 1   MGGKGKRRREKNYRAAHGGYTGLPPPPDASKHDALPSKLRQIISFTQNPTGAIGFSNDKK 60

Query: 61  KDDGHAQN------------VD-----TSGQLKATQHSENGHEQLIPSSANDXXXXXXXX 103
              GHAQN            VD     ++GQLKA Q  +   E+ + S   D        
Sbjct: 61  NVGGHAQNKTALKDTGDVETVDVKQGISNGQLKAPQLLDRSEEKRMESGGVDKKKKKRKR 120

Query: 104 XEVKDLRFLAEMDKTRSQLXXXXXXXXXXXXXXXXXXXXXXXXXLDFPGHEKIKFGDVVQ 163
            EVKDLRF  E+DKT SQL                         +DFPG EKIKFGD+VQ
Sbjct: 121 KEVKDLRFEMEVDKTSSQL-KRKERKKKYFEAKKKKHKKSNEEKMDFPGQEKIKFGDIVQ 179

Query: 164 APPKLAAIPRAFKN 177
           APPKLA  P+AFKN
Sbjct: 180 APPKLAVPPKAFKN 193