Miyakogusa Predicted Gene

Lj1g3v2585650.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2585650.1 tr|B9N4X2|B9N4X2_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_744271 PE=4 SV=1,46.02,7e-16,
,TC77572.path2.1
         (106 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g04020.1                                                       171   2e-43
Glyma06g04190.2                                                       170   3e-43
Glyma06g04190.1                                                       134   2e-32
Glyma07g33370.1                                                        69   1e-12
Glyma02g15080.1                                                        69   1e-12

>Glyma04g04020.1 
          Length = 402

 Score =  171 bits (433), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 83/108 (76%), Positives = 93/108 (86%), Gaps = 2/108 (1%)

Query: 1   MRKAAMTSTSFQGFALAPSEHLSHNSMEYYDGKDVSSVADDRKGSFIHLPSRPSINANGV 60
           +RKA M+STSFQGFALAPS++LS +S EYY GK V ++AD+RKG FIHLPSRPSINANGV
Sbjct: 295 LRKATMSSTSFQGFALAPSDNLSSSSTEYYVGKGVGTIADERKGGFIHLPSRPSINANGV 354

Query: 61  LGQVLFDVWVPKNVEDWDERSNP--GLLAATRRHVPFNPIKCIRRSRL 106
           LGQ+LFDV VPKNVEDWD RSN     LA TR+HVPFNPIKCIRRSRL
Sbjct: 355 LGQILFDVCVPKNVEDWDIRSNSKNAPLAGTRKHVPFNPIKCIRRSRL 402


>Glyma06g04190.2 
          Length = 404

 Score =  170 bits (431), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 83/108 (76%), Positives = 93/108 (86%), Gaps = 2/108 (1%)

Query: 1   MRKAAMTSTSFQGFALAPSEHLSHNSMEYYDGKDVSSVADDRKGSFIHLPSRPSINANGV 60
           +RKAAM STSFQGFALAPS++LS +S EYY GK V ++AD+RKG FIHLPSRPSINANGV
Sbjct: 297 LRKAAMFSTSFQGFALAPSDNLSSSSTEYYVGKGVGTIADERKGGFIHLPSRPSINANGV 356

Query: 61  LGQVLFDVWVPKNVEDWDERSNP--GLLAATRRHVPFNPIKCIRRSRL 106
           LGQ+LFDV VPKNVEDW  RSN    L+A TR+HVPFNPIKCIRRSRL
Sbjct: 357 LGQILFDVCVPKNVEDWCIRSNSKNALVAGTRKHVPFNPIKCIRRSRL 404


>Glyma06g04190.1 
          Length = 971

 Score =  134 bits (338), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 64/82 (78%), Positives = 72/82 (87%)

Query: 1   MRKAAMTSTSFQGFALAPSEHLSHNSMEYYDGKDVSSVADDRKGSFIHLPSRPSINANGV 60
           +RKAAM STSFQGFALAPS++LS +S EYY GK V ++AD+RKG FIHLPSRPSINANGV
Sbjct: 297 LRKAAMFSTSFQGFALAPSDNLSSSSTEYYVGKGVGTIADERKGGFIHLPSRPSINANGV 356

Query: 61  LGQVLFDVWVPKNVEDWDERSN 82
           LGQ+LFDV VPKNVEDW  RSN
Sbjct: 357 LGQILFDVCVPKNVEDWCIRSN 378


>Glyma07g33370.1 
          Length = 417

 Score = 68.9 bits (167), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/112 (39%), Positives = 66/112 (58%), Gaps = 6/112 (5%)

Query: 1   MRKAAMTST-SFQGFALAPSEHLSH-NSMEYYDGKDVSSVADDRKGSFIHLPSRPSINAN 58
           ++K A+ S  S +  A+ P++H    +S  +Y  ++  +  D++K   + +PS PSI+A+
Sbjct: 306 LQKVAINSNKSLRRVAVGPTDHFFLPSSAGHYGDRESGTPQDEQKEKSVCVPSFPSISAH 365

Query: 59  GVLGQVLFDVWVPKNVEDWDERSNPGL----LAATRRHVPFNPIKCIRRSRL 106
            VLGQ LFDV VPKNVE WD +S+  L     A+  RH  F   K I RS+L
Sbjct: 366 SVLGQFLFDVCVPKNVEGWDVKSSGNLNRKSCASAPRHSLFRGTKRIGRSKL 417


>Glyma02g15080.1 
          Length = 412

 Score = 68.6 bits (166), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/112 (39%), Positives = 66/112 (58%), Gaps = 6/112 (5%)

Query: 1   MRKAAMTST-SFQGFALAPSEHLSH-NSMEYYDGKDVSSVADDRKGSFIHLPSRPSINAN 58
           ++K A+ S  S +  A+ P++H    +S  +Y  ++  +  D++K   + +PS PSI+A+
Sbjct: 301 LQKVAINSNKSLRRVAVGPTDHFFLPSSAGHYSDRESGAPQDEQKEKPVFVPSFPSISAH 360

Query: 59  GVLGQVLFDVWVPKNVEDWDERSNPGL----LAATRRHVPFNPIKCIRRSRL 106
            VLGQ LFDV VPKNVE WD +S+  L     A+  RH  F   K I RS+L
Sbjct: 361 SVLGQFLFDVCVPKNVEGWDVKSSGNLNGRSCASAPRHSLFRGTKRIGRSKL 412