Miyakogusa Predicted Gene
- Lj1g3v2580890.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2580890.1 Non Chatacterized Hit- tr|I1N3E7|I1N3E7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.55804
PE,84.62,0,WD-REPEAT PROTEIN,NULL; WD40 REPEAT PROTEIN,NULL;
WD_REPEATS_2,WD40 repeat; WD_REPEATS_REGION,WD40-r,CUFF.29233.1
(429 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma18g45270.1 664 0.0
Glyma09g40560.1 660 0.0
Glyma15g38570.1 159 7e-39
Glyma09g10290.1 62 1e-09
Glyma19g00890.1 61 3e-09
Glyma15g22450.1 60 5e-09
Glyma05g09360.1 59 1e-08
Glyma15g09170.1 52 1e-06
Glyma03g35310.1 51 3e-06
Glyma13g25350.1 50 5e-06
Glyma13g29940.1 49 8e-06
Glyma16g27980.1 49 1e-05
>Glyma18g45270.1
Length = 429
Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/408 (78%), Positives = 349/408 (85%)
Query: 22 FFNSYFRHRQSEVRSIANXXXXXXXXXXXXXXXXXXXXXXXXXQIKRHHPLDLNTLKGHG 81
FF++Y+R RQSE++SIA+ Q KRHHPLDLNTLKGHG
Sbjct: 22 FFSTYYRKRQSEIQSIADPNPKPLSSKAPPKKPLSKPHSSDKDQNKRHHPLDLNTLKGHG 81
Query: 82 DAVTGICFSPDGQNLATACADGIVRVFKLDDASSKSFRFLRINLPPGGHPXXXXXXXXXX 141
DAVTGICFSPDG+NLATACADG+VRVFKLDDASSKSF+FLRINLP GGHP
Sbjct: 82 DAVTGICFSPDGRNLATACADGVVRVFKLDDASSKSFKFLRINLPAGGHPTAVAFSDDAS 141
Query: 142 XXXXXXHTLSGCSLYMYGEEKPKTSDSKTQPKLPLPEIKWERHKVHDKKAILTLFGTSAT 201
+TLSGCSLYMYGEEKPKTS+ K Q KLPLPEIKWE HKVHDKK+I+T+FG SAT
Sbjct: 142 SIVVASYTLSGCSLYMYGEEKPKTSEDKPQTKLPLPEIKWEHHKVHDKKSIITMFGASAT 201
Query: 202 YGSADGSTIIASCSEGTDIILWHGKTGKSVGHVDTNQLKNNMAAISPNGRFIAAAAFTAD 261
YG+ADGSTI+ASCSEGTDIILWHGKTGKSVGHVDTNQLKNNMA ISPNGRFIAAAAFTAD
Sbjct: 202 YGTADGSTIVASCSEGTDIILWHGKTGKSVGHVDTNQLKNNMATISPNGRFIAAAAFTAD 261
Query: 262 VKVWEIVYAKDGSVKEVSSAMQLKGHKSAVTWLCFTPNSEQVITASKDGSLRVWNINVRY 321
VK+WEIVYAKDGSVKEV + MQLKGHKSAVTWLCF PNSEQ+ITASKDGS+R+WNINVRY
Sbjct: 262 VKIWEIVYAKDGSVKEVLNVMQLKGHKSAVTWLCFMPNSEQIITASKDGSMRLWNINVRY 321
Query: 322 HLDEDPKTLKVFPIPLHDSNGTTLHYDRLSISPDGKIMAATHGSTLQWLCLETGKVLDTA 381
HLDEDPKTLKVF IPLHDS+GTTLHYDRLS+SPDGKI+AATHGSTLQWLC+ETGKVLDTA
Sbjct: 322 HLDEDPKTLKVFLIPLHDSSGTTLHYDRLSVSPDGKILAATHGSTLQWLCVETGKVLDTA 381
Query: 382 EKAHDGDITCISWAPKTIPMGDKPILVLATASADKKVKLWAAPSHLSS 429
EKAHD DI+CISWAPK IPMG++ +LVLATASADKKVKLWA+PS SS
Sbjct: 382 EKAHDSDISCISWAPKPIPMGNEQVLVLATASADKKVKLWASPSIPSS 429
>Glyma09g40560.1
Length = 435
Score = 660 bits (1704), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/410 (77%), Positives = 345/410 (84%), Gaps = 6/410 (1%)
Query: 22 FFNSYFRHRQSEVRSIA------NXXXXXXXXXXXXXXXXXXXXXXXXXQIKRHHPLDLN 75
FN+YF RQSE+RSIA N Q KRHHPLDLN
Sbjct: 22 IFNTYFCKRQSEIRSIADPNPNSNSNPKLVSSKPPPKKPLSKPHSSDKDQNKRHHPLDLN 81
Query: 76 TLKGHGDAVTGICFSPDGQNLATACADGIVRVFKLDDASSKSFRFLRINLPPGGHPXXXX 135
TLKGHGDAVTG+CFS DG+NLATACADG+VRVFKLDDASSKSF+FLRINLP GGHP
Sbjct: 82 TLKGHGDAVTGVCFSRDGRNLATACADGVVRVFKLDDASSKSFKFLRINLPAGGHPTAVA 141
Query: 136 XXXXXXXXXXXXHTLSGCSLYMYGEEKPKTSDSKTQPKLPLPEIKWERHKVHDKKAILTL 195
+TLSGCSLYMYGEEKPKTS+ K Q KLPLPEIKWE HKVHDKK+I+T+
Sbjct: 142 FSDDASSIVVASYTLSGCSLYMYGEEKPKTSEDKPQAKLPLPEIKWEHHKVHDKKSIITM 201
Query: 196 FGTSATYGSADGSTIIASCSEGTDIILWHGKTGKSVGHVDTNQLKNNMAAISPNGRFIAA 255
FG SATYG+ADGSTIIASCSEGTDIILWHGKTGKSVGHVDTNQLKNNMA ISPNGRFIAA
Sbjct: 202 FGASATYGTADGSTIIASCSEGTDIILWHGKTGKSVGHVDTNQLKNNMATISPNGRFIAA 261
Query: 256 AAFTADVKVWEIVYAKDGSVKEVSSAMQLKGHKSAVTWLCFTPNSEQVITASKDGSLRVW 315
AAFTADVK+WEIVYAKDGSVKEV + MQLKGHKSAVTWLCFTPNSEQ+ITASKDGS+R+W
Sbjct: 262 AAFTADVKIWEIVYAKDGSVKEVLNVMQLKGHKSAVTWLCFTPNSEQIITASKDGSMRIW 321
Query: 316 NINVRYHLDEDPKTLKVFPIPLHDSNGTTLHYDRLSISPDGKIMAATHGSTLQWLCLETG 375
NINVRYHLDEDPKTLKVFPIPLHDS+GTTLHYDR+S+SPDG +AATHGSTLQWLC+ETG
Sbjct: 322 NINVRYHLDEDPKTLKVFPIPLHDSSGTTLHYDRMSVSPDGNFLAATHGSTLQWLCVETG 381
Query: 376 KVLDTAEKAHDGDITCISWAPKTIPMGDKPILVLATASADKKVKLWAAPS 425
KVLDTAEKAHD DI+CISWAPKTIPMG++ +LVLATASADKKVKLWA+PS
Sbjct: 382 KVLDTAEKAHDSDISCISWAPKTIPMGNEQVLVLATASADKKVKLWASPS 431
>Glyma15g38570.1
Length = 152
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 79/108 (73%), Positives = 86/108 (79%), Gaps = 4/108 (3%)
Query: 218 TDIILWHGKTGKSVGHVDTNQLKNNMAAISPNGRFIAAAAFTADVKVWEIVYAKDGSVKE 277
TDII W GK GK VGHVDTNQLKNNMA ISPN FIAAA FT DVK EIVYA DGSVK+
Sbjct: 36 TDIIFWLGKIGKIVGHVDTNQLKNNMATISPNDHFIAAATFTVDVK--EIVYANDGSVKK 93
Query: 278 VSSAMQLKGHK--SAVTWLCFTPNSEQVITASKDGSLRVWNINVRYHL 323
V + M LKGHK S VTWLCF PN EQ+ITASKDGS+R+WNIN Y++
Sbjct: 94 VLNVMHLKGHKCQSVVTWLCFMPNCEQIITASKDGSMRIWNINDGYYI 141
>Glyma09g10290.1
Length = 904
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 102/233 (43%), Gaps = 42/233 (18%)
Query: 191 AILTLFGTSATYGSADGSTIIASCSEGTDIILWHGKTGKSVGHVDTNQLKNNMAAISPNG 250
A+ FG T+G C++ +++W ++ + + N A SP+
Sbjct: 356 AVFNEFGNWLTFG----------CAKLGQLLVWEWRSESYILKQQGHYFDVNCVAYSPDS 405
Query: 251 RFIAAAAFTADVKVWEIVYAKDGSVKEVSSAMQLKGHKSAVTWLCFTPNSEQVITASKDG 310
+ +A A VKVW ++ + H +AVT L F P++ +++AS DG
Sbjct: 406 QLLATGADDNKVKVW--------TLSSGFCFVTFSEHTNAVTALHFMPSNNVLLSASLDG 457
Query: 311 SLRVWNINVRYHLDEDPKTLKVFPIPLHDSNGTTLHYDRLSISPDGKIMAATHGSTLQWL 370
++R W++ +RY + K F P + + L+ G+++ A + +
Sbjct: 458 TIRAWDL-LRY------RNFKTFTTP------SPRQFVSLTADISGEVICAGTSDSFEVF 504
Query: 371 C--LETGKVLDTAEKAHDGDITCISWAPKTIPMGDKPILVLATASADKKVKLW 421
++TG+++D H+ + + ++P VLA++S DK V+LW
Sbjct: 505 VWSMKTGRLMDVLS-GHEAPVHGLVFSPTNA--------VLASSSYDKTVRLW 548
>Glyma19g00890.1
Length = 788
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 77/171 (45%), Gaps = 32/171 (18%)
Query: 252 FIAAAAFTADVKVWEIVYAKDGSVKEVSSAMQLKGHKSAVTWLCFTPNSEQVITASKDGS 311
+AA A + +K+W++ +E L GH+S T + F P E + S D +
Sbjct: 73 LVAAGAASGTIKLWDL--------EEAKIVRTLTGHRSNCTSVDFHPFGEFFASGSLDTN 124
Query: 312 LRVWNINVRYHLDEDPKTLKVFPIPLHDSNGTTLHYDRLSISPDGK-IMAATHGSTLQWL 370
L++W+I + +H G T + + +PDG+ +++ +T++
Sbjct: 125 LKIWDIRKKG--------------CIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLW 170
Query: 371 CLETGKVLDTAEKAHDGDITCISWAPKTIPMGDKPILVLATASADKKVKLW 421
L GK+L K H+G I CI + P +LAT SAD+ VK W
Sbjct: 171 DLTAGKLLHDF-KCHEGQIQCIDFHPNE--------FLLATGSADRTVKFW 212
>Glyma15g22450.1
Length = 680
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 98/217 (45%), Gaps = 32/217 (14%)
Query: 207 GSTIIASCSEGTDIILWHGKTGKSVGHVDTNQLKNNMAAISPNGRFIAAAAFTADVKVWE 266
G+ + C++ +++W ++ + + N A SP+ + +A A VKVW
Sbjct: 356 GNWLTFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCVAYSPDSQLLATGADDNKVKVW- 414
Query: 267 IVYAKDGSVKEVSSAMQLKGHKSAVTWLCFTPNSEQVITASKDGSLRVWNINVRYHLDED 326
++ + H +A+T L F P++ +++AS DG++R W++ +RY
Sbjct: 415 -------TLSSGFCFVTFSEHTNAITALHFIPSNNVLLSASLDGTIRAWDL-LRY----- 461
Query: 327 PKTLKVFPIPLHDSNGTTLHYDRLSISPDGKIMAATHGSTLQWLC--LETGKVLDTAEKA 384
+ K F P + + L+ G+++ A + + ++TG+++D
Sbjct: 462 -RNFKTFTTP------SPRQFVSLTADISGEVICAGTSDSFEVFVWSMKTGRLMDVLS-G 513
Query: 385 HDGDITCISWAPKTIPMGDKPILVLATASADKKVKLW 421
H+ + + ++P VLA++S DK V+LW
Sbjct: 514 HEAPVHGLVFSPTNT--------VLASSSYDKTVRLW 542
>Glyma05g09360.1
Length = 526
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 76/171 (44%), Gaps = 32/171 (18%)
Query: 252 FIAAAAFTADVKVWEIVYAKDGSVKEVSSAMQLKGHKSAVTWLCFTPNSEQVITASKDGS 311
+AA A + +K+W++ +E L H+S T + F P E + S D +
Sbjct: 73 LVAAGAASGTIKLWDL--------EEAKIVRTLTSHRSNCTSVDFHPFGEFFASGSLDTN 124
Query: 312 LRVWNINVRYHLDEDPKTLKVFPIPLHDSNGTTLHYDRLSISPDGK-IMAATHGSTLQWL 370
L++W+I + +H G T + + +PDG+ +++ +T++
Sbjct: 125 LKIWDIRKKG--------------CIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLW 170
Query: 371 CLETGKVLDTAEKAHDGDITCISWAPKTIPMGDKPILVLATASADKKVKLW 421
L GK+L K H+G + CI + P +LAT SAD+ VK W
Sbjct: 171 DLTAGKLLHDF-KCHEGQVQCIDFHPNE--------FLLATGSADRTVKFW 212
>Glyma15g09170.1
Length = 316
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 99/249 (39%), Gaps = 46/249 (18%)
Query: 208 STIIASCSEGTDIILWHGKTGKSVGHVDTNQLKNNMAAISPNGRFIAAAAFTADVKVWEI 267
+ I+A+ S I W K+G+ + + N I+P+ RF+AAA ++++++
Sbjct: 5 TVILATASYDHTIRFWEAKSGRCYRTIQYPDSQVNRLEITPDKRFLAAAG-NPHIRLFDV 63
Query: 268 VYAKDGSVKEVSSAMQLKGHKSAVTWLCFTPNSEQVITASKDGSLRVWNINVRYHLDEDP 327
+ M H + V + F + + + S+DG++++W++ E
Sbjct: 64 ------NSNSPQPVMSYDSHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPGCQREYE 117
Query: 328 KTLKVFPIPLH---------DSNGTTLHYD-------------------RLSISPDGKIM 359
V + LH D NG +D L++ DG ++
Sbjct: 118 SRAAVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLV 177
Query: 360 AA--THGSTLQWLCLETGKVLDTAE-----KAHDGDITCISWAPKTIPMGDKPILVLATA 412
A HG+ W L + + E +AH G I +P+ +P LATA
Sbjct: 178 VAANNHGTCYVWRLLRGTQTMTNFEPLHKLQAHKGYILKCLLSPEFC----EPHRYLATA 233
Query: 413 SADKKVKLW 421
S+D VK+W
Sbjct: 234 SSDHTVKIW 242
>Glyma03g35310.1
Length = 343
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 99/232 (42%), Gaps = 26/232 (11%)
Query: 209 TIIASCSEGTDIILWH---GKTGKSVGHVDTNQLKNNMAAISPNGRFIAAAAFTADVKVW 265
T++A+CS + +W G + V + + M P + + ++ VKVW
Sbjct: 124 TLLATCSRDKSVWIWEVLPGNEFECVSVLQGHSQDVKMVKWHPTEDILFSCSYDNSVKVW 183
Query: 266 EIVYAKDGSVKEVSSAMQL----KGHKSAVTWLCFTPNSEQVITASKDGSLRVW---NIN 318
A +G + L GH S V L F + ++++T S D +L+VW ++
Sbjct: 184 ----ADEGDSDDWQCVQTLGEPNNGHTSTVWALSFNVSGDKMVTCSDDLTLKVWETESVG 239
Query: 319 VRYHLDEDPKTLKVFPIPLHDSNGTTLHYDRLSI----SPDGKIMAATHGSTLQWLCLET 374
+ P T HD ++H+ R I + D I + Q +
Sbjct: 240 TQSGGGFAPWTHLCTLSGYHDRTIFSVHWSREGIFASGAADNAIRLFVDDNESQ-VGGPL 298
Query: 375 GKVLDTAEKAHDGDITCISWAPKTIPMGDKPILVLATASADKKVKLWAAPSH 426
K+L EKAHD DI + W+P G+KP VLA+AS D +K+W S+
Sbjct: 299 YKLLLKKEKAHDMDINSVQWSP-----GEKP--VLASASDDGTIKVWELTSY 343
>Glyma13g25350.1
Length = 819
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 87/198 (43%), Gaps = 38/198 (19%)
Query: 199 SATYGSADGSTIIASCSEGTDIILWHGKTGKSVGHVDTNQLKNNMAAISPNGRFIAAAAF 258
S T+ SA+ I++ S G I LW + K V + ++L P G F A+ +
Sbjct: 63 SVTFDSAE-VLILSGASSGV-IKLWDLEEAKMVRTLTGHRLNCTAVEFHPFGEFFASGSL 120
Query: 259 TADVKVWEIVYAKDGSVKEVSSAMQLKGHKSAVTWLCFTPNSEQVITASKDGSLRVWNI- 317
++ +W+I K G ++ KGH ++ + F+P+ V++ D ++VW++
Sbjct: 121 DTNLNIWDI--RKKGCIQ------TYKGHSQGISTIKFSPDGRWVVSGGFDNVVKVWDLT 172
Query: 318 ------NVRYH------LDEDP-----------KTLKVFPIPLHDSNGTTLH----YDRL 350
+ ++H LD P +T+K + + + G+T H +
Sbjct: 173 GGKLLHDFKFHEGHIRSLDFHPLEFLMATGSADRTVKFWDLETFELIGSTRHEVSGVRSI 232
Query: 351 SISPDGKIMAATHGSTLQ 368
+ PDG+I+ A +L+
Sbjct: 233 AFHPDGQILFAGFEDSLK 250
>Glyma13g29940.1
Length = 316
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 98/249 (39%), Gaps = 46/249 (18%)
Query: 208 STIIASCSEGTDIILWHGKTGKSVGHVDTNQLKNNMAAISPNGRFIAAAAFTADVKVWEI 267
+ I+A+ S I W K+G+ + + N I+P+ F+AAA ++++++
Sbjct: 5 TVILATASYDHTIRFWEAKSGRCYRTIQYPDSQVNRLEITPDKHFLAAAG-NPHIRLFDV 63
Query: 268 VYAKDGSVKEVSSAMQLKGHKSAVTWLCFTPNSEQVITASKDGSLRVWNINVRYHLDEDP 327
+ M H + V + F + + + S+DG++++W++ E
Sbjct: 64 ------NSNSPQPVMSYDSHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPGCQREYE 117
Query: 328 KTLKVFPIPLH---------DSNGTTLHYD-------------------RLSISPDGKIM 359
V + LH D NG +D L++ DG ++
Sbjct: 118 SRAAVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLV 177
Query: 360 AA--THGSTLQWLCLETGKVLDTAE-----KAHDGDITCISWAPKTIPMGDKPILVLATA 412
A HG+ W L + + E +AH G I +P+ +P LATA
Sbjct: 178 VAANNHGTCYVWRLLRGTQTMTNFEPLHKLQAHKGYILKCLLSPEFC----EPHRYLATA 233
Query: 413 SADKKVKLW 421
S+D VK+W
Sbjct: 234 SSDHTVKIW 242
>Glyma16g27980.1
Length = 480
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 80/157 (50%), Gaps = 33/157 (21%)
Query: 211 IASCSEGTDIILW------HGKTGKSVGHVDTNQLKNNMAAISPNGRFIAAAAFTADVKV 264
+ S S+ + LW H KT + GH QL N++ SP+G+++A+A+F VK+
Sbjct: 339 LVSGSDDFTMFLWEPFINKHPKT-RMTGH---QQLVNHVY-FSPDGQWVASASFDKSVKL 393
Query: 265 WEIVYAKDGSVKEVSSAMQLKGHKSAVTWLCFTPNSEQVITASKDGSLRVWNINVRYHLD 324
W +G+ + +A +GH V + ++ +S +++ SKD +L+VW+I R L
Sbjct: 394 W------NGTTGKFVAA--FRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTR-KLK 444
Query: 325 EDPKTLKVFPIPLHDSNGTTLHYDRLSISPDGKIMAA 361
+D +P H ++ + SPDG+ +A+
Sbjct: 445 QD--------LPGHSDEVFSVDW-----SPDGEKVAS 468