Miyakogusa Predicted Gene

Lj1g3v2536080.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2536080.1 tr|B9H5T2|B9H5T2_POPTR Predicted protein
(Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_207971
PE=4,84.65,0,4-HYDROXYBENZOATE OCTAPRENYLTRANSFERASE,NULL;
PRENYLTRANSFERASES,NULL; seg,NULL; UbiA,UbiA prenyltra,CUFF.29117.1
         (216 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g44900.1                                                       335   2e-92
Glyma09g40920.1                                                       182   3e-46

>Glyma18g44900.1 
          Length = 398

 Score =  335 bits (859), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 169/214 (78%), Positives = 174/214 (81%)

Query: 3   VERTKSRPVASGLLTPXXXXXXXXXXXXXXXXXXXXXNNYSRVLGASSLFLVFSYPLMKR 62
           VERTK RPVASGLLTP                     NNYSRVLGASSL LVFSYPLMKR
Sbjct: 185 VERTKLRPVASGLLTPFQGLCFLGFQLLLGLGILLQLNNYSRVLGASSLLLVFSYPLMKR 244

Query: 63  FTFWPQAYLGLTFNWGALLGWAAIKGSLDPSIVLPLYASGVFWTLVYDTIYAHQDKEDDL 122
           FTFWPQA+LGLTFNWGALLGWAAIKGSLDPSIVLPLYASGVFWTLVYDTIYAHQDKEDDL
Sbjct: 245 FTFWPQAFLGLTFNWGALLGWAAIKGSLDPSIVLPLYASGVFWTLVYDTIYAHQDKEDDL 304

Query: 123 KVGVKSTALRFGDLTKQWITGFGFACLGNLALSGFNAELGWPYYACLAAASGHLGWQVWT 182
           KVGVKSTALRFGD TK+WITGFG ACLG LA+SGFNAE+GWPYYA LA ASGHLGWQ+WT
Sbjct: 305 KVGVKSTALRFGDSTKEWITGFGIACLGGLAVSGFNAEIGWPYYASLAVASGHLGWQIWT 364

Query: 183 VDLSSRADCNRKFVSNKWXXXXXXXXXXXXRLSS 216
           VDLSSRADCNRKFVSNKW            RLSS
Sbjct: 365 VDLSSRADCNRKFVSNKWFGAIIFGGILAGRLSS 398


>Glyma09g40920.1 
          Length = 441

 Score =  182 bits (461), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 92/122 (75%), Positives = 95/122 (77%), Gaps = 15/122 (12%)

Query: 80  LLGWAAIKGSLDPSIVLPLYASGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDLTKQ 139
           +LGW AIKGSLDPSIVLPLYASGVFWTLVYDTIYAHQDKEDD KVG              
Sbjct: 316 ILGWTAIKGSLDPSIVLPLYASGVFWTLVYDTIYAHQDKEDDQKVG-------------- 361

Query: 140 WITGFGFACLGNLALSGFNAEL-GWPYYACLAAASGHLGWQVWTVDLSSRADCNRKFVSN 198
           WITGF  ACLG LA+SGFNAE+ GW YYA LA  SGHLGWQ W VDLSSR DCNRKFVSN
Sbjct: 362 WITGFEIACLGGLAVSGFNAEIAGWLYYASLAVVSGHLGWQTWAVDLSSRTDCNRKFVSN 421

Query: 199 KW 200
           KW
Sbjct: 422 KW 423