Miyakogusa Predicted Gene

Lj1g3v2536050.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2536050.1 Non Chatacterized Hit- tr|G7JS00|G7JS00_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,38.3,2e-17,seg,NULL; coiled-coil,NULL,CUFF.29142.1
         (603 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g44860.1                                                       583   e-166
Glyma09g40950.1                                                       506   e-143

>Glyma18g44860.1 
          Length = 682

 Score =  583 bits (1503), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 360/610 (59%), Positives = 416/610 (68%), Gaps = 67/610 (10%)

Query: 1   MEDDXXXXXXXXXXXXXXXXVENGVGEAATRDQNLVSNNVKDERTDVSETA------ANS 54
           MEDD                VENGVGE A RDQNL+SN  KDE T++S+TA       + 
Sbjct: 1   MEDDKRRRKNKKKKNKQNKNVENGVGETANRDQNLLSNG-KDEHTNLSKTANEQSSNVDL 59

Query: 55  NGVGEMSTRDQNLASDGKDEPAPPLETANEAHEQSVNWNGVVEVPNGDQNVATSGKDELN 114
           NGVGE  +RD NL ++GKDEPA     A+E      + NGVVE PN DQN+  SGKDE N
Sbjct: 60  NGVGETLSRDHNLVNNGKDEPANLSGVADEQC-MDADRNGVVETPNSDQNLVKSGKDE-N 117

Query: 115 QPT-ESADRQSTNVDSNGVNGHLPNGKECATSEETIKTLGNENDILKQNAVTSDETIGKL 173
            P+ E AD QSTN+DSNG   H PNGKE A SEE                          
Sbjct: 118 IPSLEFADGQSTNMDSNG---HPPNGKEWAISEE-------------------------- 148

Query: 174 KGENAMLIQKETTSEETIKKLKEENDTYIQKEAISEDIIRNLKAENAMHIQKEAISEETI 233
                           TI+KLKEEND +IQKE +S++ IR LKAEN MHIQKEAI EETI
Sbjct: 149 ----------------TIRKLKEENDIHIQKETLSKETIRKLKAENDMHIQKEAIMEETI 192

Query: 234 RKLKEQNDIHMQKEVASEETTRKLKE-HDMRVQKEAILEDTIRKLNEENDMHMKKEAISE 292
           RKL EQND+HMQKE+ASEET RKLKE HDM VQKEAI EDTIR L E+ND+H++KE    
Sbjct: 193 RKLTEQNDMHMQKEIASEETIRKLKEKHDMDVQKEAISEDTIRNLKEKNDVHVQKE---- 248

Query: 293 ETISKLKKENAFHIQKEAISEETIKKLKEENDEHVYKEVTLEELIKKLQAEKELQTQKQT 352
           ETI KLK+EN  HIQ+EAIS+ETIK LKEEND+ + K V+LEE+I  LQ + ELQTQKQT
Sbjct: 249 ETIKKLKEENEVHIQEEAISKETIKNLKEENDKLLQKVVSLEEVINNLQTDNELQTQKQT 308

Query: 353 ELEMKIAQLQGENNSLIQREAGLVEKTNLLLNEKVVLSLKGESLERKINLLESDLSSFSE 412
            LEM+IAQLQ ENNSL+Q+EAGLVEKTN LLNEK       ESLERKINLLE++LSSFSE
Sbjct: 309 SLEMRIAQLQSENNSLLQKEAGLVEKTNQLLNEK-------ESLERKINLLENELSSFSE 361

Query: 413 KESGLEMRIAQLQRENDSLIQKEAELVGKTNQLLNEKTVLSLKGESLEQKVNLLESDLSS 472
           KE GLE RIAQLQ EN+SL+QKEA LV +TNQLLNEK VLSLKGESLEQK+ LLESDL+S
Sbjct: 362 KEVGLETRIAQLQSENNSLLQKEATLVERTNQLLNEKAVLSLKGESLEQKIYLLESDLNS 421

Query: 473 FVEKENATKDIISNLNRSISVLQVQVAELEEFRSXXXXXXXXXXXXVSGLQSTIQNLENX 532
            V+KEN+TK+ ISNLN +I+VLQ QV ELEE R+            VS LQST+QN EN 
Sbjct: 422 LVKKENSTKETISNLNGNIAVLQAQVEELEESRNNLFLENQQLREKVSSLQSTVQNHENS 481

Query: 533 XXXXXXXXXXXXXXXXENDDLKSQIEAACTLVEKLVAENAELVEKVNELYIELDRQSAEI 592
                           EN+DLKS+IEAA TLVEKL+AENAELVEKV EL +ELD +SAE+
Sbjct: 482 NTSSCSWDASVKDLASENEDLKSEIEAAFTLVEKLMAENAELVEKVTELCVELDHRSAEV 541

Query: 593 RLSRDTVPDG 602
             S  T  +G
Sbjct: 542 GHSGVTESNG 551


>Glyma09g40950.1 
          Length = 594

 Score =  506 bits (1304), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 323/599 (53%), Positives = 365/599 (60%), Gaps = 151/599 (25%)

Query: 1   MEDDXXXXXXXXXXXXXXXXVENGVGEAATRDQNLVSNNVKDERTDVSETA------ANS 54
           MEDD                VENGVGE A RDQNLVSN  KDE T++SETA       +S
Sbjct: 1   MEDDKRKRKNKKKKNKQNKNVENGVGETANRDQNLVSNG-KDEHTNLSETANEQSSNVDS 59

Query: 55  NGVGEMSTRDQNLASDGKDEPAPPLETANEAHEQSVNW--NGVVEVPNGDQNVATSGKDE 112
           NGVGE S+RDQNL ++GKDEPA     +   HEQS+N   NGVVE PN DQN+  SGKD+
Sbjct: 60  NGVGETSSRDQNLVNNGKDEPAL---LSGVTHEQSMNADRNGVVETPNSDQNLVKSGKDK 116

Query: 113 LNQPTESADRQSTNVDSNGVNGHLPNGKECATSEETIKTLGNENDILKQNAVTSDETIGK 172
              P E AD QSTN+DSNG   HLPNGKECA SEE                         
Sbjct: 117 NIPPLEFADGQSTNMDSNG---HLPNGKECAISEE------------------------- 148

Query: 173 LKGENAMLIQKETTSEETIKKLKEENDTYIQKEAISEDIIRNLKAENAMHIQKEAISEET 232
                            TI+KLKEEND +IQKE +S++ IR LKAEN MHIQKEAI EET
Sbjct: 149 -----------------TIRKLKEENDIHIQKETLSKETIRKLKAENDMHIQKEAIMEET 191

Query: 233 IRKLKEQNDIHMQKEVASEETTRKLKE-HDMRVQKEAILEDTIRKLNEENDMHMKKEAIS 291
           IRKL EQND+HMQKE+ASEET RKLKE HD+ VQKEAI EDTIR L E+NDMHM+KE   
Sbjct: 192 IRKLTEQNDLHMQKEIASEETIRKLKEKHDVHVQKEAISEDTIRNLKEKNDMHMQKE--- 248

Query: 292 EETISKLKKENAFHIQKEAISEETIKKLKEENDEHVYKEVTLEELIKKLQAEKELQTQKQ 351
            ETI KLK+EN  HIQKEAIS+ETIKK +EEND+ V                     QK+
Sbjct: 249 -ETIRKLKEENEGHIQKEAISKETIKKFEEENDKLV---------------------QKE 286

Query: 352 TELEMKIAQLQGENNSLIQREAGLVEKTNLLLNEKVVLSLKGESLERKINLLESDLSSFS 411
           T LEM+IAQLQ ENNSL+Q+EAGLVE++N LLNEKVVLS+K                   
Sbjct: 287 TSLEMRIAQLQSENNSLLQKEAGLVERSNQLLNEKVVLSMKA------------------ 328

Query: 412 EKESGLEMRIAQLQRENDSLIQKEAELVGKTNQLLNEKTVLSLKGESLEQKVNLLESDLS 471
               GLE R AQL  EN+SL+QKEA LV +TNQLLNEK VLSLKGESLEQK+ LLESDLS
Sbjct: 329 ---VGLETRFAQLHSENNSLLQKEATLVERTNQLLNEKEVLSLKGESLEQKIYLLESDLS 385

Query: 472 SFVEKENATKDIISNLNRSISVLQVQVAELEEFRSXXXXXXXXXXXXVSGLQSTIQNLEN 531
           S VEKEN+TKD IS LN +I+VLQVQ                                  
Sbjct: 386 SLVEKENSTKDTISKLNGNIAVLQVQ---------------------------------- 411

Query: 532 XXXXXXXXXXXXXXXXXENDDLKSQIEAACTLVEKLVAENAELVEKVNELYIELDRQSA 590
                            EN DLKS+IEAA TLVEKL+AENAELVEKV EL +ELD QSA
Sbjct: 412 -------------DLASENKDLKSEIEAAFTLVEKLMAENAELVEKVTELCVELDHQSA 457


  Database: Glyma1.pep
    Posted date:  Mar 10, 2009  2:06 PM
  Number of letters in database: 25,431,882
  Number of sequences in database:  75,778
  
Lambda     K      H
   0.321    0.123    0.308 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 75778
Number of Hits to DB: 72,977,034,674
Number of extensions: -1233433645
Number of successful extensions: 12378314
Number of sequences better than 1.0e-05: 335178
Number of HSP's gapped: 9496981
Number of HSP's successfully gapped: 926415
Length of database: 25,431,882
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 17 ( 7.9 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 108 (46.2 bits)