Miyakogusa Predicted Gene

Lj1g3v2534980.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2534980.1 tr|B9HFB2|B9HFB2_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_820063 PE=4
SV=1,76.19,4e-17,seg,NULL,NODE_62345_length_361_cov_79.789474.path1.1
         (63 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g34710.1                                                        62   2e-10
Glyma13g10520.1                                                        60   5e-10
Glyma20g16200.1                                                        60   6e-10

>Glyma16g34710.1 
          Length = 178

 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/35 (88%), Positives = 34/35 (97%)

Query: 1   MRQHRAFILAERKKRKAQMQEANRKKSIKRVERKM 35
           MRQ RAFILAERKKRKAQ+QEANRKK+I+RVERKM
Sbjct: 116 MRQRRAFILAERKKRKAQLQEANRKKNIQRVERKM 150


>Glyma13g10520.1 
          Length = 178

 Score = 60.1 bits (144), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 30/35 (85%), Positives = 34/35 (97%)

Query: 1   MRQHRAFILAERKKRKAQMQEANRKKSIKRVERKM 35
           MRQ RAFILAE+KKRKAQ+QEANRKK+I+RVERKM
Sbjct: 116 MRQRRAFILAEKKKRKAQLQEANRKKNIQRVERKM 150


>Glyma20g16200.1 
          Length = 178

 Score = 60.1 bits (144), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 30/35 (85%), Positives = 34/35 (97%)

Query: 1   MRQHRAFILAERKKRKAQMQEANRKKSIKRVERKM 35
           MRQ RAFILAE+KKRKAQ+QEANRKK+I+RVERKM
Sbjct: 116 MRQRRAFILAEKKKRKAQLQEANRKKNIQRVERKM 150