Miyakogusa Predicted Gene
- Lj1g3v2534960.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2534960.1 Non Chatacterized Hit- tr|I1HSU9|I1HSU9_BRADI
Uncharacterized protein (Fragment) OS=Brachypodium
dis,36.81,0.00000000000002,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY
NOT NAMED,NULL,NODE_42898_length_1365_cov_14.850550.path1.1
(315 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma03g00400.1 209 2e-54
Glyma16g34680.1 207 1e-53
Glyma18g44880.1 204 1e-52
Glyma09g40930.1 201 1e-51
Glyma02g42350.1 52 6e-07
>Glyma03g00400.1
Length = 368
Score = 209 bits (533), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 130/251 (51%), Positives = 156/251 (62%), Gaps = 45/251 (17%)
Query: 106 LLVVPPDFPLETPPNLRTTLP-NRPVSAGRSRPGANSATL--KPNPDTQASVTSMSRRN- 161
L VVPPDFPLETPPNLRTTLP +RPVSAGRSRPGA TL KPN + QA V SMSRR
Sbjct: 120 LPVVPPDFPLETPPNLRTTLPADRPVSAGRSRPGA-VVTLPSKPNSEMQAPV-SMSRRQP 177
Query: 162 ------GRVPQGT-------------EVVTRKSVQAPISVTDNNGFGRAISKKSLDMAPR 202
GR+ + T EVV R+SV+ + ++N+G GR ISKKSLDMA R
Sbjct: 178 SPIANRGRLSEYTGKGRGHTNAADASEVVARRSVKCSTTASENSGLGRTISKKSLDMAIR 237
Query: 203 QMDTRNSSGTVRSLPSPTLFPQSIRTSTPK------------------ALRSLQTXXXXX 244
MD RNSSGT+RS+P+ L+PQSIRTSTPK +L+
Sbjct: 238 HMDVRNSSGTLRSVPNAKLYPQSIRTSTPKTHHSRGLSVPVSMNNISGSLQRRNNNNNNM 297
Query: 245 XXXXXXXDHERQHFAKLREV-DVYQSSHHYDALLRKEDWSNTNWLHSGDEKCDQGHIFDK 303
+ ++Q+ KL EV DVY+ S+ YD+LL KED +NTNWL S D+KCDQG IFD
Sbjct: 298 KNGREIDERQKQYLGKLSEVLDVYE-SYRYDSLLLKEDLNNTNWLRSVDDKCDQGPIFDN 356
Query: 304 GFESVLEPFAL 314
GFES+ EPF L
Sbjct: 357 GFESLPEPFGL 367
>Glyma16g34680.1
Length = 416
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 135/249 (54%), Positives = 159/249 (63%), Gaps = 36/249 (14%)
Query: 99 GRN-SRPQLL-VVPPDFPLETPPNLRTTLP-NRPVSAGRSRPGANSATL--KPNPDTQAS 153
GRN + P+L VVPPDFPLETPPNLRTTLP +RPVSAGRSRPGA TL KPN + QA
Sbjct: 170 GRNPATPRLQPVVPPDFPLETPPNLRTTLPADRPVSAGRSRPGA-VVTLPSKPNSEMQAP 228
Query: 154 VTSMSRRN-------GRVPQGT-------------EVVTRKSVQAPISVTDNNGFGRAIS 193
V +MSRR GR+ + T EVV R+S ++ + ++NN GR IS
Sbjct: 229 V-NMSRRQPSPIANRGRLSEYTAKSRGHANAADASEVVARRSAKSSTTASENNVLGRTIS 287
Query: 194 KKSLDMAPRQMDTRNSSGTVRSLPSPTLFPQSIRTSTPKA--LRSLQTXXXXXXXXXXXX 251
KKSLDMA R MD RNSSGT+RS+PS TL+PQSIRTSTPK R L
Sbjct: 288 KKSLDMAIRHMDVRNSSGTLRSVPSATLYPQSIRTSTPKTHHTRGLSVPVNNNNNNNRKN 347
Query: 252 DHE-----RQHFAKLRE-VDVYQSSHHYDALLRKEDWSNTNWLHSGDEKCDQGHIFDKGF 305
E +Q+ KL E VDVY+ S+ YD+LL KED +NTNWL S D+KCDQG IFD GF
Sbjct: 348 GREIGERQKQYLGKLSEVVDVYE-SYRYDSLLLKEDLNNTNWLRSVDDKCDQGPIFDNGF 406
Query: 306 ESVLEPFAL 314
E + EPF L
Sbjct: 407 EYLPEPFGL 415
>Glyma18g44880.1
Length = 585
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 126/258 (48%), Positives = 145/258 (56%), Gaps = 58/258 (22%)
Query: 112 DFPLETPPNLRTTLPNRPVSAGRSRPGANSATLKPN-PDTQASVTSMSRR---------- 160
DFPLETPPNLRTTLP+RPVSAGRSRPG T+K N +TQAS +M RR
Sbjct: 330 DFPLETPPNLRTTLPDRPVSAGRSRPGG--VTMKANVSETQASPVTMPRRHSSPIVSRGR 387
Query: 161 ------------NG---------RVPQGTEVVTRKSVQAPISVTDNNGFGRAISKKSLDM 199
NG +V EV RKS+++ + DN GFGR ISKKSLDM
Sbjct: 388 VTEPAAKTRGYSNGHHADASEPRKVSHAPEVAARKSIRSSTTAPDNTGFGRTISKKSLDM 447
Query: 200 APRQMDTRNSSGTVRSLPSPTLFPQSIRTSTPKALR-------------SLQTXXXXXXX 246
A + MD RNSSG +RSL S TLFPQSIRTST K+ R + +
Sbjct: 448 AIKHMDIRNSSGNIRSLSSTTLFPQSIRTSTSKSHRVSSAPASVDMNGSMISSKNGANFD 507
Query: 247 XXXXXDH----------ERQHFAKLREVDVYQSSHHYDALLRKEDWSNTNWLHSGDEKCD 296
D ERQ+ AKL EVD+Y+SS YDALL KED NTNWLH D+KCD
Sbjct: 508 VGNGIDRNMMMKGRDADERQYSAKLSEVDIYESSR-YDALLFKEDLKNTNWLHGADDKCD 566
Query: 297 QGHIFDKGFESVLEPFAL 314
QG IFD GFE + EPF L
Sbjct: 567 QGPIFDNGFEHLPEPFGL 584
>Glyma09g40930.1
Length = 586
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 125/258 (48%), Positives = 142/258 (55%), Gaps = 58/258 (22%)
Query: 112 DFPLETPPNLRTTLPNRPVSAGRSRPGANSATLKPNP-DTQASVTSMSRR---------- 160
DFPLETPPNLRTTLP+RPVSAGRSRPG T+K N +TQAS +M RR
Sbjct: 331 DFPLETPPNLRTTLPDRPVSAGRSRPGG--VTMKTNSSETQASPVTMPRRHSSPIVSRGR 388
Query: 161 ------------NG---------RVPQGTEVVTRKSVQAPISVTDNNGFGRAISKKSLDM 199
NG +V EV RKSV++ + DN GFGR ISKKSLDM
Sbjct: 389 VTEPAAKTRGYSNGHHVDAPEPRKVSHAPEVAARKSVRSSSTAPDNTGFGRTISKKSLDM 448
Query: 200 APRQMDTRNSSGTVRSLPSPTLFPQSIRTSTPKALR-----------------------S 236
A + MD RNSSG +RSL S TLFPQSIRTST K+ R
Sbjct: 449 AIKHMDIRNSSGNIRSLTSTTLFPQSIRTSTTKSHRVSSAPASVDMNGSMISSKNGANFD 508
Query: 237 LQTXXXXXXXXXXXXDHERQHFAKLREVDVYQSSHHYDALLRKEDWSNTNWLHSGDEKCD 296
+ ER + AKL EVD+Y+SS YDALL KED NTNWLH D+KCD
Sbjct: 509 VGNGIDRNMMMKGRDADERHYSAKLSEVDIYESSR-YDALLFKEDLKNTNWLHGADDKCD 567
Query: 297 QGHIFDKGFESVLEPFAL 314
QG IFD GFE + EPF L
Sbjct: 568 QGPIFDNGFEHLPEPFGL 585
>Glyma02g42350.1
Length = 693
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 65/148 (43%), Gaps = 51/148 (34%)
Query: 111 PDFPLETPPNLRTTLPNRPVSAGRSRPGAN---SATLKP-----------NPDTQASVTS 156
P F L+ PPNLRT+LP RP+S R RPGA+ S++++P +P S
Sbjct: 463 PGFSLDAPPNLRTSLPERPLSTTRGRPGASNPRSSSVEPTSSGRPRRQSCSPSRGCSNNG 522
Query: 157 MSRRNGR------------------VPQGTEVVTR---KSVQAPISVTDNNGF------- 188
+SR G V GT++V R AP + D N F
Sbjct: 523 ISRSTGSSMPAVNRAYSKANDNVSPVVMGTKMVERVINMRKLAPPRMDDKNSFHNLSGKS 582
Query: 189 ---------GRAISKKSLDMAPRQMDTR 207
GR++SKKSLDMA R MD R
Sbjct: 583 SSSPDSSGFGRSLSKKSLDMAIRHMDIR 610