Miyakogusa Predicted Gene

Lj1g3v2513730.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2513730.1 Non Chatacterized Hit- tr|B9T3P1|B9T3P1_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,34.27,0.00000000000002, ,CUFF.29088.1
         (212 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g44770.1                                                       329   1e-90

>Glyma18g44770.1 
          Length = 325

 Score =  329 bits (844), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 164/216 (75%), Positives = 177/216 (81%), Gaps = 5/216 (2%)

Query: 1   MISCVRSNKGALEFTAHKNLGDETHRNFWVHMGNVASRMDSIVEQVTLALQKDSKSEEFK 60
           MI CVRS+KGALEF A    GD+THRNFWVHMGNVASR+D+IVEQVT+ LQ  + S+EFK
Sbjct: 111 MIPCVRSSKGALEFAAQTITGDQTHRNFWVHMGNVASRLDTIVEQVTMVLQHKT-SKEFK 169

Query: 61  ERIQETESMICLCRYPHDNAPKQNEGVSDKKNDSLKDHALRFYLPLEHCIFYIQTERGPL 120
           ERIQ+TES ICLCRYPHDN PKQNE  S KK D L DHALRFYLP+E CIFY+QTERGPL
Sbjct: 170 ERIQDTESWICLCRYPHDNVPKQNEDTSVKKKDKLCDHALRFYLPMEQCIFYVQTERGPL 229

Query: 121 SFDAGPENIVVTVGKQLEEWSRGVFKCVPGEMIFMPSIQGSDASFSIELTCSTSLN-LNQ 179
           SFDAGPENIVVTVGKQLEEWS GVFKCVPGEMIFMPS Q S ASFSIEL C  S N L+ 
Sbjct: 230 SFDAGPENIVVTVGKQLEEWSHGVFKCVPGEMIFMPSFQSSPASFSIELVCLASSNDLSH 289

Query: 180 SLKVS---EKIISLTDQILIVFSLAFLCKFLYFIFS 212
           SL  S   +KIISL DQILIVF L FL  FLYF+FS
Sbjct: 290 SLDNSDNCDKIISLADQILIVFCLVFLYNFLYFVFS 325