Miyakogusa Predicted Gene

Lj1g3v2471310.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2471310.1 Non Chatacterized Hit- tr|I1KK90|I1KK90_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.27043
PE,34.18,0.00003,seg,NULL; no description,NULL,CUFF.29046.1
         (132 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g17250.1                                                        54   3e-08
Glyma07g17310.1                                                        52   2e-07

>Glyma07g17250.1 
          Length = 238

 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 4/79 (5%)

Query: 25  LFNVTIPEYPTIQTVVTTSPQVAETWIS----ETHNPTTLKFLIIGLAIEWHXXXXXXXS 80
           L++V+     TI T++T+ P + ++WIS    +  +    + L +GL IEW         
Sbjct: 41  LYDVSFNNTHTIYTLLTSDPSLVDSWISTVLRDHQHQHQQRVLTVGLDIEWRPNTQRNMQ 100

Query: 81  TLFCTLQFCVANRCLIFQV 99
               TLQ CVA RCL+FQ+
Sbjct: 101 NPVATLQLCVAERCLVFQI 119


>Glyma07g17310.1 
          Length = 203

 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 4/81 (4%)

Query: 21 NFQRLFNVTIPEYPTIQTVVTTSPQVAETWISETHNPTTLKFLIIGLAIEWHXXXXXXXS 80
          N++R + VT+  Y TIQT+VT SP    +W+S          +I+GL +EW         
Sbjct: 8  NYKR-YEVTMGNY-TIQTLVTASPSQVGSWLSSNIRNNADDLMIVGLDVEWKPNTRPNMQ 65

Query: 81 --TLFCTLQFCVANRCLIFQV 99
                TLQ C+ + CLIFQ+
Sbjct: 66 PPNPVATLQLCIGHNCLIFQI 86