Miyakogusa Predicted Gene

Lj1g3v2416610.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2416610.1 Non Chatacterized Hit- tr|C5X6F1|C5X6F1_SORBI
Putative uncharacterized protein Sb02g043850
OS=Sorghu,44.62,8e-19,DUF588,Uncharacterised protein family UPF0497,
trans-membrane plant; seg,NULL,CUFF.29002.1
         (199 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g44020.1                                                       279   1e-75
Glyma09g41680.1                                                       274   4e-74
Glyma01g31910.1                                                       194   4e-50
Glyma03g05230.1                                                       177   6e-45
Glyma03g05230.2                                                       137   7e-33
Glyma04g35320.1                                                        75   4e-14
Glyma06g19450.1                                                        72   4e-13
Glyma17g09780.1                                                        64   9e-11
Glyma05g02140.1                                                        54   9e-08
Glyma16g08050.1                                                        49   4e-06

>Glyma18g44020.1 
          Length = 197

 Score =  279 bits (713), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 134/191 (70%), Positives = 150/191 (78%), Gaps = 1/191 (0%)

Query: 10  NSTPKIHVQTPPMAPAGDRQAP-AASTGGVGGILRRWRREDLLKRGSLGLRGIALLFSLI 68
           + +PKIHV+TPP+AP+   +   AA++GG+GGILRRW+REDL+KRGSLGLRGIALLF LI
Sbjct: 7   SDSPKIHVETPPVAPSAPSEGHHAAASGGIGGILRRWKREDLIKRGSLGLRGIALLFCLI 66

Query: 69  SFIAMASNQHGDWREFDKYEEYRYLLAIAILSCLYTGAQVFRQVHELSTGKQLIQPRMAA 128
           SFI MASN+HGDWREFDKYEEYRYLLAIAILS LYTGAQ FRQ+ ELST KQL+QPRMAA
Sbjct: 67  SFIIMASNKHGDWREFDKYEEYRYLLAIAILSSLYTGAQAFRQIQELSTAKQLLQPRMAA 126

Query: 129 MIDFIGDQXXXXXXXXXXXXXXPITNRMREGADNIFTDXXXXXXXXXXXXXLCLALSALI 188
           MIDF GDQ              P+TNRMREGADNIFTD             LCLA+SALI
Sbjct: 127 MIDFFGDQIIAYLLISSASSAIPMTNRMREGADNIFTDSSAAAISMSIFAFLCLAVSALI 186

Query: 189 SGYKLSTQPYI 199
           SGYKLSTQPYI
Sbjct: 187 SGYKLSTQPYI 197


>Glyma09g41680.1 
          Length = 197

 Score =  274 bits (701), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 136/198 (68%), Positives = 149/198 (75%), Gaps = 4/198 (2%)

Query: 5   MXXXXNSTPKIHVQTPPMAPAGDRQ---APAASTGGVGGILRRWRREDLLKRGSLGLRGI 61
           M      +PKIHV+TPP+AP+   +   APA S GG+GGILRRW+REDL+KRGSLGLRG+
Sbjct: 1   MSNLDGDSPKIHVETPPVAPSAPSEGHLAPA-SHGGIGGILRRWKREDLIKRGSLGLRGV 59

Query: 62  ALLFSLISFIAMASNQHGDWREFDKYEEYRYLLAIAILSCLYTGAQVFRQVHELSTGKQL 121
           ALLFSLISF  MASN+HGDWREFDKYEEYRYLLAIAILS LYTGAQ FR + ELST KQL
Sbjct: 60  ALLFSLISFFIMASNKHGDWREFDKYEEYRYLLAIAILSSLYTGAQAFRLLQELSTAKQL 119

Query: 122 IQPRMAAMIDFIGDQXXXXXXXXXXXXXXPITNRMREGADNIFTDXXXXXXXXXXXXXLC 181
           +QPRMAAMIDF GDQ              PITNRMREGADNIFTD             LC
Sbjct: 120 LQPRMAAMIDFFGDQIIAYLLISSASSAIPITNRMREGADNIFTDSSAAAISMSIFAFLC 179

Query: 182 LALSALISGYKLSTQPYI 199
           LA+SALISGYKLSTQPYI
Sbjct: 180 LAVSALISGYKLSTQPYI 197


>Glyma01g31910.1 
          Length = 205

 Score =  194 bits (494), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 97/173 (56%), Positives = 114/173 (65%), Gaps = 3/173 (1%)

Query: 27  DRQAPAASTGG-VGGILRRWRREDLLKRGSLGLRGIALLFSLISFIAMASNQHGDWREFD 85
           D+  P   TGG   GILRRW+R+++L+RGSLGLRGIAL  SLIS I  ASN+HG W  FD
Sbjct: 27  DKHEP--ETGGDTTGILRRWKRKEMLRRGSLGLRGIALFMSLISLILTASNKHGYWNNFD 84

Query: 86  KYEEYRYLLAIAILSCLYTGAQVFRQVHELSTGKQLIQPRMAAMIDFIGDQXXXXXXXXX 145
           K+EEYRY+LA+A LS LYT  QVFRQVHEL TGK L++P+   +IDF+GDQ         
Sbjct: 85  KFEEYRYMLAVAALSSLYTVVQVFRQVHELFTGKSLMRPKTEGLIDFVGDQVVAYLLISS 144

Query: 146 XXXXXPITNRMREGADNIFTDXXXXXXXXXXXXXLCLALSALISGYKLSTQPY 198
                P T+ MRE   NIFTD              CLALSA+ISGYKLSTQ Y
Sbjct: 145 TSSAIPATDEMREVTTNIFTDSAAAGIAFSFFAFCCLALSAVISGYKLSTQTY 197


>Glyma03g05230.1 
          Length = 229

 Score =  177 bits (449), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 86/175 (49%), Positives = 110/175 (62%)

Query: 24  PAGDRQAPAASTGGVGGILRRWRREDLLKRGSLGLRGIALLFSLISFIAMASNQHGDWRE 83
           P+ D+  P    GG   + R+W+R+++L  G LGLRGIAL  SL S I MA N++G   E
Sbjct: 24  PSVDKHEPETDDGGATEVQRQWKRKEMLTFGPLGLRGIALSMSLFSLIFMARNKYGYGYE 83

Query: 84  FDKYEEYRYLLAIAILSCLYTGAQVFRQVHELSTGKQLIQPRMAAMIDFIGDQXXXXXXX 143
           FDK+EEYRYL+A+A LS LYT  QVFRQVHE+ST K L+QPR   +IDF+GDQ       
Sbjct: 84  FDKFEEYRYLVAVATLSTLYTAVQVFRQVHEISTMKSLMQPRTEGLIDFVGDQVLAYLLI 143

Query: 144 XXXXXXXPITNRMREGADNIFTDXXXXXXXXXXXXXLCLALSALISGYKLSTQPY 198
                  P+T++MR+   N+FTD               LALSA++SGYKLSTQ Y
Sbjct: 144 SSTSSAIPLTDQMRKVTINVFTDFSAASIAFSLFAFCSLALSAVVSGYKLSTQTY 198


>Glyma03g05230.2 
          Length = 168

 Score =  137 bits (345), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 64/113 (56%), Positives = 81/113 (71%)

Query: 24  PAGDRQAPAASTGGVGGILRRWRREDLLKRGSLGLRGIALLFSLISFIAMASNQHGDWRE 83
           P+ D+  P    GG   + R+W+R+++L  G LGLRGIAL  SL S I MA N++G   E
Sbjct: 24  PSVDKHEPETDDGGATEVQRQWKRKEMLTFGPLGLRGIALSMSLFSLIFMARNKYGYGYE 83

Query: 84  FDKYEEYRYLLAIAILSCLYTGAQVFRQVHELSTGKQLIQPRMAAMIDFIGDQ 136
           FDK+EEYRYL+A+A LS LYT  QVFRQVHE+ST K L+QPR   +IDF+GDQ
Sbjct: 84  FDKFEEYRYLVAVATLSTLYTAVQVFRQVHEISTMKSLMQPRTEGLIDFVGDQ 136


>Glyma04g35320.1 
          Length = 268

 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 6/190 (3%)

Query: 13  PKIHVQTPPMAPAGDRQAPAASTGGVGGILRRWRR---EDLLKRGSLGLRGIALLFSLIS 69
           P   V     + A + Q PAA    V G  RR R    E+ + + +LG R   ++  LIS
Sbjct: 76  PSTAVMVFNASSAEEAQRPAAKAAPVIGGERRSRSAATEETVSKAALGFRLSEVVVCLIS 135

Query: 70  FIAMASNQHGDWR--EFDKYEEYRYLLAIAILSCLYTGAQVFRQVHELSTGKQLIQPRMA 127
           F  MA+++   W    FD+Y+EYRY L++ ++   Y+  Q      +++TGK+LI   + 
Sbjct: 136 FSVMAADKTQGWSGDSFDRYKEYRYCLSVNVIGFAYSALQACDLTCQIATGKRLISHHLR 195

Query: 128 AMIDFIGDQXXXXXXXXXXXXXXP-ITNRMREGADNIFTDXXXXXXXXXXXXXLCLALSA 186
              DF  DQ                + + +     + FT+             +  A+S+
Sbjct: 196 NHFDFFMDQVLAYLLISASSSAATRVDDWISNWGKDEFTEMATASIGMAFLAFVAFAISS 255

Query: 187 LISGYKLSTQ 196
           LISGY L  +
Sbjct: 256 LISGYTLCNR 265


>Glyma06g19450.1 
          Length = 263

 Score = 72.0 bits (175), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 12/186 (6%)

Query: 23  APAGDRQAPAASTGGVGGILRR---------WRREDLLKRGSLGLRGIALLFSLISFIAM 73
           A   D++    +   VGG  RR         W+ ++ + + +LG R   ++  LISF  M
Sbjct: 75  AAEEDQRTAEKAVPAVGGGERRSRSAAAAEGWKTDETVSKAALGFRLSEVVVCLISFSVM 134

Query: 74  ASNQHGDWR--EFDKYEEYRYLLAIAILSCLYTGAQVFRQVHELSTGKQLIQPRMAAMID 131
           A+++   W    FD+Y+EYRY L++ I+   Y+  Q      +L+TGK+LI   +    D
Sbjct: 135 AADKTQGWSGDSFDRYKEYRYCLSVNIIGFAYSALQACDLTCQLATGKRLISHHLRNHFD 194

Query: 132 FIGDQXXXXXXXXXXXXXXP-ITNRMREGADNIFTDXXXXXXXXXXXXXLCLALSALISG 190
           F  DQ                + + +     + FT+             +  A+S+LISG
Sbjct: 195 FFMDQVLAYLLISSSSSAATRVEDWILNWGKDEFTEMATASIGMAFLAFVAFAISSLISG 254

Query: 191 YKLSTQ 196
           Y L  +
Sbjct: 255 YTLCNR 260


>Glyma17g09780.1 
          Length = 235

 Score = 64.3 bits (155), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 54/93 (58%), Gaps = 2/93 (2%)

Query: 46  RREDLLKRGSLGLRGIALLFSLISFIAMASNQHGDWR--EFDKYEEYRYLLAIAILSCLY 103
           +RE + K+ +LG R   ++  LISF  MA+++   W    FD+Y+EYRY L++ +++ +Y
Sbjct: 107 KREMMAKKVALGFRLSEVVLCLISFSVMAADKTRGWSGDSFDRYKEYRYCLSVNVIAFVY 166

Query: 104 TGAQVFRQVHELSTGKQLIQPRMAAMIDFIGDQ 136
              Q     +++ TG+++I   +    DF  DQ
Sbjct: 167 AAFQACDLAYQVVTGRRIINHHLRYHFDFFMDQ 199


>Glyma05g02140.1 
          Length = 232

 Score = 54.3 bits (129), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 36/154 (23%), Positives = 68/154 (44%), Gaps = 7/154 (4%)

Query: 46  RREDLLKRGSLGLRGIALLFSLISFIAMASNQHGDWR--EFDKYEEYRYLLAIAILSCLY 103
           +RE + K+ +   R   ++  LISF  MA+++   W    FD+Y+EYRY L++ +++ +Y
Sbjct: 79  KREVMAKKVAFCFRLSEVVLCLISFSVMAADKTRGWSGDSFDRYKEYRYCLSVNVIAFVY 138

Query: 104 TGAQVFRQVHELSTGKQLIQP--RMAAMIDFIGDQXXXXXXXXXXXXXXPITNRMREGAD 161
              Q     +++ TG+++I    R +    F+                  + +       
Sbjct: 139 AAFQAGDLAYQVVTGRRIINHHLRKSQRTRFV---LAYLLISAASSAATRVDDWQSNWGK 195

Query: 162 NIFTDXXXXXXXXXXXXXLCLALSALISGYKLST 195
           + FT+             +  A+S+L SGY L T
Sbjct: 196 DEFTEMASASIALAFLAFVAFAISSLFSGYNLCT 229


>Glyma16g08050.1 
          Length = 317

 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 2/83 (2%)

Query: 56  LGLRGIALLFSLISFIAMASNQHGDW--REFDKYEEYRYLLAIAILSCLYTGAQVFRQVH 113
           LGLR  A +F L SF  +A+++   W    F  Y+E+RY L++ ++  +++  Q+     
Sbjct: 173 LGLRVTAFVFCLASFSVLATDKKQGWAIDSFYLYKEFRYSLSVNVIGFVHSALQICDLGR 232

Query: 114 ELSTGKQLIQPRMAAMIDFIGDQ 136
             +TGK L++ ++     F  DQ
Sbjct: 233 YFATGKHLVEHQLRGYFTFALDQ 255