Miyakogusa Predicted Gene
- Lj1g3v2379130.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2379130.3 tr|G7KTA8|G7KTA8_MEDTR Integrator complex subunit
OS=Medicago truncatula GN=MTR_7g070280 PE=4 SV=1,69.33,0,no
description,Armadillo-like helical; seg,NULL; SUBFAMILY NOT
NAMED,NULL; UNCHARACTERIZED,NULL; ARM,CUFF.28984.3
(898 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma07g19290.1 1043 0.0
>Glyma07g19290.1
Length = 908
Score = 1043 bits (2697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 557/891 (62%), Positives = 644/891 (72%), Gaps = 13/891 (1%)
Query: 12 APNQTQQQQPLSLHTLSSMRSLLINPSTPKRTVSSILETLTRSPQLTHHSLNLLSELATL 71
A +QPLSL TL +MRSLL++PSTP+ TVSSILETL RSP +HH+L LLS+ A L
Sbjct: 2 AEQNDTSEQPLSLRTLCTMRSLLLHPSTPQHTVSSILETLARSP--SHHALKLLSDAAAL 59
Query: 72 NPSFTLDTLLPSAAESTTRLAVEALAALKPGCELDGETFVSLCFGPSVPARLWMLRNAGL 131
P L P S RLAVEALA LD F SLCFG SVP R WMLRNAG
Sbjct: 60 RPDLALS---PPLLPSPQRLAVEALAISLTRLNLDDTRFASLCFGASVPVRAWMLRNAGA 116
Query: 132 GYRVRPALLFPVLLGFTRDPFPYVREASLEGLVRLSE-CGEFQDLGLVKGCYQRAVQLLG 190
+ VR LL VLLGFT+DPFP+VR ++LEGLV E GE +D+GLV CY+RAV+LL
Sbjct: 117 EFEVRHGLLLGVLLGFTKDPFPHVRASALEGLVGFCERGGESKDVGLVDACYRRAVRLLR 176
Query: 191 DVEGCVRISALRVVASWGLMLAAFNADMKVYWSNEVFAKLCSAARDMSMKVRVEAFNGLR 250
DV+ VR SA+RVVASWGLMLAA N+DMK YWSN++FAKLCS ARDM+MKVRVEAF+GLR
Sbjct: 177 DVDPSVRFSAVRVVASWGLMLAASNSDMKAYWSNDIFAKLCSMARDMNMKVRVEAFSGLR 236
Query: 251 KMEVVSEDILMQXXXXXXXXXXXXXXXXDERKSEQFVMLAPSVAGALVHGLEDEFFEVRK 310
KME+VSED+L+Q +R SEQFVMLA +VAGALVHGLEDEFFEVRK
Sbjct: 237 KMEMVSEDLLLQSLSKRVSGHGKQKETLGQRTSEQFVMLATNVAGALVHGLEDEFFEVRK 296
Query: 311 AACQSLHRLTILSAKFACEAXXXXXXXXXXXSVVVRFQALETMHHMAINGCLKLQEKHVH 370
+ C+SL LT LS++FA +A S VVR Q+LET+HHMAING LKL EKH+H
Sbjct: 297 SVCESLRTLTSLSSEFARKALDSLMDVLNDESEVVRLQSLETLHHMAINGRLKLLEKHLH 356
Query: 371 MFLGALVDCSWEVRHAERKILKIVKLNDLALFKSSIDRLLENLQSYSQDEADVFSAFSHL 430
MFLGALVD SW+VR+ +RKILK+VKLN LALFKSS+D LL +L SY QDEADVFS FSHL
Sbjct: 357 MFLGALVDNSWDVRYTDRKILKVVKLNYLALFKSSVDSLLGSLDSYPQDEADVFSTFSHL 416
Query: 431 GRNHKKFVGLIMRETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNADIGSIPPLMFS 490
GRNHKKFV LI+++ NAD+G IPP+MFS
Sbjct: 417 GRNHKKFVSLIIKDMFEEVETALEGNVEFNSARIAALLILSISAALLNADVGRIPPVMFS 476
Query: 491 YAVTLLGRIYYAFSDIMDRDALLAYLCERSRSTAYSAANINLEEGKQQLPLSEGDAANLS 550
YAVT LGRIY AFSDIMDRDALLA LCE+SRST YSA NIN EG+QQ PL EGDA N +
Sbjct: 477 YAVTFLGRIYNAFSDIMDRDALLACLCEKSRSTEYSATNINPGEGEQQFPLFEGDAPNFA 536
Query: 551 SNEVMDSIMVSHIMREQKEVANYQVEQNQSLHNEVTNFTNYILDKFPGLWSMIQTGGTNE 610
SNEV+ S + SHI REQKEVAN QVEQ QS++NEVTN NYIL K P +W IQ+G TNE
Sbjct: 537 SNEVIGSKIDSHITREQKEVANDQVEQQQSVYNEVTNLINYILAKLPDMWPRIQSGHTNE 596
Query: 611 VLRSFRCLKEDLALLKFDSLGSG--DALAFTVLYLRNITLLVEVWEHLHLGPANGLSSCG 668
VLRS RCLKE L +KFDSLGSG DALAFT+LYLR I LL EVW +L PA GL G
Sbjct: 597 VLRSLRCLKE-LTTMKFDSLGSGDADALAFTLLYLRIIELLAEVWNNLL--PAKGLCYQG 653
Query: 669 T-VLESKLQKLDRRAKEFLSRFVGFTAXXXXXXXXXXXVTYALRLYKVETSCLSLTLERL 727
LE KL KLDRR KE +SRF+GF+A +TY LR+ K E SC++ TL+RL
Sbjct: 654 IGKLEFKLGKLDRRVKELMSRFIGFSAEEELNVLELMLLTYTLRISKEEISCINHTLKRL 713
Query: 728 TAIYLRFVSILKEKSSLPSNFVAELGKLLHECTSTYEASCSPLELDKCLKLFSLKQFMFH 787
+++YLR SILKE S+LPSNF+ ELGK+L TS ASCSPL+ + CLK FSLKQF+FH
Sbjct: 714 SSLYLRVESILKESSALPSNFLVELGKVL-SSTSINGASCSPLQFEACLKFFSLKQFVFH 772
Query: 788 GGIRHVKAELSIPNNDSEHHLTFVSGLPVGIQCEITLHNVLCDSRLWLRMSVDDGSTQYV 847
G I+HVKAELS+PN D EH L FVSGLPVGIQCEITLHN+L +SRLWLRM++DDG QY
Sbjct: 773 GPIKHVKAELSVPNIDFEHPLPFVSGLPVGIQCEITLHNILSESRLWLRMTLDDGFIQYF 832
Query: 848 FLDLDRFEGSREVRKLAFVVPFYRTPKANSLKLKVSIGLECMFENVCPVQR 898
FLDLD EGS EVRK FV PFYRT +A+ L LKV IG EC+FENV PVQ+
Sbjct: 833 FLDLDCSEGSEEVRKCTFVAPFYRTAEADCLILKVCIGSECLFENVSPVQK 883