Miyakogusa Predicted Gene
- Lj1g3v2378100.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2378100.1 Non Chatacterized Hit- tr|I1LQY0|I1LQY0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.45205
PE,82.13,0,seg,NULL; NOC3p,Nucleolar complex-associated;
CBF,CCAAT-binding factor; coiled-coil,NULL; ARM repeat,CUFF.28976.1
(831 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma12g07470.1 1171 0.0
Glyma10g39100.1 1128 0.0
Glyma12g07470.2 936 0.0
Glyma11g20830.1 205 2e-52
Glyma07g24660.1 127 7e-29
Glyma11g16020.1 82 4e-15
>Glyma12g07470.1
Length = 828
Score = 1171 bits (3029), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 594/784 (75%), Positives = 646/784 (82%), Gaps = 9/784 (1%)
Query: 32 QFVKDNRAFASLLSTLDTQSITRHVTRVADAKDDALEKLYEQRMQKTALKKEKEETG--- 88
QFVK+NRA+ASLLSTLDT+SIT+HVTRVADAKDDALEKLYE+RMQK ALKKEKEETG
Sbjct: 31 QFVKENRAYASLLSTLDTRSITKHVTRVADAKDDALEKLYEKRMQKNALKKEKEETGLQV 90
Query: 89 ----SLPIKTLDGKLYYRTATNRVSENGPNEEEAGEDENVDKGLVXXXXXXXXXXXXXXX 144
+LPIKTLDGK++Y+TAT V EN P+EE GE+ DKG+V
Sbjct: 91 DRVDALPIKTLDGKIHYQTATKTVLENDPSEERTGENVKKDKGMVKLTKAEKRAKLKKMR 150
Query: 145 XXXXXXXXXVPKAEVEETPQAAVLAEVKEDLEAEETFETKKCKLAELGNALLTDPESNIK 204
V KAEVEETPQAAVLAEVKEDL AEE FE+KK KLAELGNALLTDPESNIK
Sbjct: 151 KDAKQQGKEVAKAEVEETPQAAVLAEVKEDLTAEEAFESKKHKLAELGNALLTDPESNIK 210
Query: 205 FLKEMVQISKDNDHTIVKLGLLSLLAVFKDIVPGYRIRLPTEKEQEMKVSKTVRKMRYYE 264
FLKEMVQISKDND TIVKLGLLSLLAVFKDIVPGYRIRLPTEKE +MKVSKTVRKMRYYE
Sbjct: 211 FLKEMVQISKDNDDTIVKLGLLSLLAVFKDIVPGYRIRLPTEKELDMKVSKTVRKMRYYE 270
Query: 265 STLLSSYKVYLQRLIALEKKPLFQLVAIRCMCSLLDANPHFNFREGLLEATVRNISSSDE 324
STLLS+YK YLQRL+ALEKKPLFQ VA+RC+CSLLDANPHFNFRE LL+ATVRNISS ++
Sbjct: 271 STLLSAYKAYLQRLVALEKKPLFQHVAVRCICSLLDANPHFNFRESLLDATVRNISSPND 330
Query: 325 AIRKLCCSTIKSLFTNEGKHGGEATVEAVRLISEHVKAHNCQMHPDSVEVFLSLSFDEDL 384
AIRKLCCSTI SLF NEGKHGGE TVEAVRLI++HVKAHNCQMHPDSV+VFLSLSFDEDL
Sbjct: 331 AIRKLCCSTINSLFANEGKHGGEVTVEAVRLIADHVKAHNCQMHPDSVDVFLSLSFDEDL 390
Query: 385 GXXXXXXXXXXXXXXXXXXXXNMEPSNQLPENDRKRSRKDSISKTKEEIEAEYKAASLTT 444
N+E SNQL ENDRK+S+K+ ISKT+EE+EA+YKAASL
Sbjct: 391 VMAKRIEDDQKFKNKKSKKRKNLEASNQL-ENDRKKSKKEMISKTREEVEADYKAASLAP 449
Query: 445 DVMERRQMQTETLSAVFETYFRILKHTMHSVVARPEENPDALSAGVEPHPLLAPCLKGLA 504
DVME++QMQTETLSAVFETYFRILK TM S+ ARPE N ALSA VEP PLLAPCLKGLA
Sbjct: 450 DVMEKKQMQTETLSAVFETYFRILKKTMQSIGARPEANAGALSAAVEPLPLLAPCLKGLA 509
Query: 505 KFSHLLDLDFMGDLMNHLKVLASGSSNSGNTSEKCPKCLSVSERLQCCIVAFKVMRINLE 564
KFSHL+DLDFMGDLMNHL+VLASGSSNSGNTS+KC KCL+VSERLQCCIVAFKVMR NL+
Sbjct: 510 KFSHLIDLDFMGDLMNHLRVLASGSSNSGNTSDKCSKCLTVSERLQCCIVAFKVMRNNLD 569
Query: 565 ALNVDLQDFLVHLYNLIVEYRPGRDQGEVLAEALKIMLCDDRQQDMQKAAAFIKRLATLS 624
ALNVDLQDF +HLYNL++EYRPGRDQGEVLAEALKIMLCDD+Q DMQK AAFIKRLATLS
Sbjct: 570 ALNVDLQDFFLHLYNLVLEYRPGRDQGEVLAEALKIMLCDDKQHDMQKTAAFIKRLATLS 629
Query: 625 LCVGSADSMAALVTVKHLLQKNVKCRNLLENDIGGGSVSGTISKYQPYSTDPNLSGALAS 684
LCVGSADSMAALVTVKHLLQKNVKCRNLLENDIGGGSVSGTI KY PYSTDPNLSGALAS
Sbjct: 630 LCVGSADSMAALVTVKHLLQKNVKCRNLLENDIGGGSVSGTIHKYLPYSTDPNLSGALAS 689
Query: 685 VLWELSLLSKHYHPXXXXXXXXXXXXXXXQNQVLYTRSSPQQALTEMSLDQELCFTQIS- 743
VLWEL+LLS HYHP NQVL ++SSPQQA EMSLDQELCFTQ S
Sbjct: 690 VLWELNLLSSHYHPAISTLASGISSMSTANNQVLLSKSSPQQAFKEMSLDQELCFTQQSD 749
Query: 744 SIKLNNKKRRTNXXXXXXXXXXXXXXXXLNDDELRKKLSSHFMVLHDIKENEKLRSKLDR 803
SIKLNNKKRR N +D+EL++KL SHFMVLHDIKENE+LR +LDR
Sbjct: 750 SIKLNNKKRRANGPAISPSIGSTTVTNSFDDNELKRKLCSHFMVLHDIKENERLRKELDR 809
Query: 804 TTRS 807
TT S
Sbjct: 810 TTLS 813
>Glyma10g39100.1
Length = 824
Score = 1128 bits (2918), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 584/803 (72%), Positives = 634/803 (78%), Gaps = 17/803 (2%)
Query: 32 QFVKDNRAFASLLSTLDTQSITRHVTRVADAKDDALEKLYEQRMQKTALKKEKEETG--- 88
QFVK+NRA+ASLLSTLDT SIT+ KLYE+RMQK ALKKEKEETG
Sbjct: 31 QFVKENRAYASLLSTLDTHSITKMCC-------GGGHKLYEKRMQKNALKKEKEETGLQV 83
Query: 89 ----SLPIKTLDGKLYYRTATNRVSENGPNEEEAGEDENVDKGLVXXXXXXXXXXXXXXX 144
+LPIKTLDGK++YRTAT VSEN P+EE GED N DKG+V
Sbjct: 84 DRVDALPIKTLDGKIHYRTATKTVSENDPSEEGTGEDVNKDKGMVKLTKAEKRAKLKKMR 143
Query: 145 XXXXXXXXXVPKAEVEETPQAAVLAEVKEDLEAEETFETKKCKLAELGNALLTDPESNIK 204
V KAEVEETPQAAVLAEVKEDL EE FE+KK KLAELGNALLTDPESNIK
Sbjct: 144 KEAKQQGKEVAKAEVEETPQAAVLAEVKEDLTVEEAFESKKHKLAELGNALLTDPESNIK 203
Query: 205 FLKEMVQISKDNDHTIVKLGLLSLLAVFKDIVPGYRIRLPTEKEQEMKVSKTVRKMRYYE 264
FLKEMVQISKDND TIVKLGLLSLLAVFKDIVPGYRIRLPTEKE EMKVSKTVRKMRYYE
Sbjct: 204 FLKEMVQISKDNDDTIVKLGLLSLLAVFKDIVPGYRIRLPTEKELEMKVSKTVRKMRYYE 263
Query: 265 STLLSSYKVYLQRLIALEKKPLFQLVAIRCMCSLLDANPHFNFREGLLEATVRNISSSDE 324
STLLS+YK YLQRL+ LEKKPLFQ VA+RC+CSLLDANPHFNFRE LL+ATV NISS++E
Sbjct: 264 STLLSAYKAYLQRLVVLEKKPLFQHVAVRCICSLLDANPHFNFRESLLDATVGNISSANE 323
Query: 325 AIRKLCCSTIKSLFTNEGKHGGEATVEAVRLISEHVKAHNCQMHPDSVEVFLSLSFDEDL 384
AIRKLCCSTIKSLF NEGKHGGE TVEAVRLI+ HVKAHNCQMHPDSV VFLSLSFDEDL
Sbjct: 324 AIRKLCCSTIKSLFENEGKHGGEVTVEAVRLIANHVKAHNCQMHPDSVGVFLSLSFDEDL 383
Query: 385 GXXXXXXXXXXXXXXXXXXXXNMEPSNQLPENDRKRSRKDSISKTKEEIEAEYKAASLTT 444
N+E SNQL EN+RK+SRK+ ISKT+EE+EA+YKAASL
Sbjct: 384 VMAKRIEDEQKFKNNKSKKRKNLEASNQL-ENERKKSRKEMISKTREEVEADYKAASLAP 442
Query: 445 DVMERRQMQTETLSAVFETYFRILKHTMHSVVARPEENPDALSAGVEPHPLLAPCLKGLA 504
DVME++ MQTETLSAVFETYFRILKHTM S+ ARPE N ALS+ VE PLLAPCLKGLA
Sbjct: 443 DVMEKKHMQTETLSAVFETYFRILKHTMQSIRARPEANTGALSSAVELLPLLAPCLKGLA 502
Query: 505 KFSHLLDLDFMGDLMNHLKVLASGSSNSGNTSEKCPKCLSVSERLQCCIVAFKVMRINLE 564
KFSHL+DLDFMGDLMNHL+VLASGSSNSGNTS+KC KCL+VSERLQCCIVAFKVMR NL+
Sbjct: 503 KFSHLIDLDFMGDLMNHLRVLASGSSNSGNTSDKCSKCLTVSERLQCCIVAFKVMRNNLD 562
Query: 565 ALNVDLQDFLVHLYNLIVEYRPGRDQGEVLAEALKIMLCDDRQQDMQKAAAFIKRLATLS 624
ALNVDLQDF +HLYNL++EYRPGRDQGEVLAEALKIMLCDD+Q DMQK AAFIKRLATLS
Sbjct: 563 ALNVDLQDFFLHLYNLVLEYRPGRDQGEVLAEALKIMLCDDKQHDMQKTAAFIKRLATLS 622
Query: 625 LCVGSADSMAALVTVKHLLQKNVKCRNLLENDIGGGSVSGTISKYQPYSTDPNLSGALAS 684
LCVGSADSMAALVTVKHLLQKNVKCRNLLENDIGGGSVSGTI KY PYSTDPNLSGALAS
Sbjct: 623 LCVGSADSMAALVTVKHLLQKNVKCRNLLENDIGGGSVSGTIHKYLPYSTDPNLSGALAS 682
Query: 685 VLWELSLLSKHYHPXXXXXXXXXXXXXXXQNQVLYTRSSPQQALTEMSLDQELCFTQIS- 743
VLWEL+LLS HYHP NQ+L ++SSPQQA EMSLDQELCFTQ S
Sbjct: 683 VLWELNLLSSHYHPAISTLASGISSMSTAHNQILLSKSSPQQAYKEMSLDQELCFTQQSD 742
Query: 744 SIKLNNKKRRTNXXXXXXXXXXXXXXXXLNDDELRKKLSSHFMVLHDIKENEKLRSKLDR 803
IKLNNKKRR N +D+EL+++LSSHFMVLHDIKENE+LR +LDR
Sbjct: 743 GIKLNNKKRRANGPAISPSIGSTTVTSSFDDNELQRQLSSHFMVLHDIKENERLRKELDR 802
Query: 804 TTRSXXXXXXXXXXXXXRSKPTR 826
T S RSKP+R
Sbjct: 803 TALS-LQLYEQYKKQKKRSKPSR 824
>Glyma12g07470.2
Length = 663
Score = 936 bits (2419), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/613 (77%), Positives = 519/613 (84%), Gaps = 8/613 (1%)
Query: 32 QFVKDNRAFASLLSTLDTQSITRHVTRVADAKDDALEKLYEQRMQKTALKKEKEETG--- 88
QFVK+NRA+ASLLSTLDT+SIT+HVTRVADAKDDALEKLYE+RMQK ALKKEKEETG
Sbjct: 31 QFVKENRAYASLLSTLDTRSITKHVTRVADAKDDALEKLYEKRMQKNALKKEKEETGLQV 90
Query: 89 ----SLPIKTLDGKLYYRTATNRVSENGPNEEEAGEDENVDKGLVXXXXXXXXXXXXXXX 144
+LPIKTLDGK++Y+TAT V EN P+EE GE+ DKG+V
Sbjct: 91 DRVDALPIKTLDGKIHYQTATKTVLENDPSEERTGENVKKDKGMVKLTKAEKRAKLKKMR 150
Query: 145 XXXXXXXXXVPKAEVEETPQAAVLAEVKEDLEAEETFETKKCKLAELGNALLTDPESNIK 204
V KAEVEETPQAAVLAEVKEDL AEE FE+KK KLAELGNALLTDPESNIK
Sbjct: 151 KDAKQQGKEVAKAEVEETPQAAVLAEVKEDLTAEEAFESKKHKLAELGNALLTDPESNIK 210
Query: 205 FLKEMVQISKDNDHTIVKLGLLSLLAVFKDIVPGYRIRLPTEKEQEMKVSKTVRKMRYYE 264
FLKEMVQISKDND TIVKLGLLSLLAVFKDIVPGYRIRLPTEKE +MKVSKTVRKMRYYE
Sbjct: 211 FLKEMVQISKDNDDTIVKLGLLSLLAVFKDIVPGYRIRLPTEKELDMKVSKTVRKMRYYE 270
Query: 265 STLLSSYKVYLQRLIALEKKPLFQLVAIRCMCSLLDANPHFNFREGLLEATVRNISSSDE 324
STLLS+YK YLQRL+ALEKKPLFQ VA+RC+CSLLDANPHFNFRE LL+ATVRNISS ++
Sbjct: 271 STLLSAYKAYLQRLVALEKKPLFQHVAVRCICSLLDANPHFNFRESLLDATVRNISSPND 330
Query: 325 AIRKLCCSTIKSLFTNEGKHGGEATVEAVRLISEHVKAHNCQMHPDSVEVFLSLSFDEDL 384
AIRKLCCSTI SLF NEGKHGGE TVEAVRLI++HVKAHNCQMHPDSV+VFLSLSFDEDL
Sbjct: 331 AIRKLCCSTINSLFANEGKHGGEVTVEAVRLIADHVKAHNCQMHPDSVDVFLSLSFDEDL 390
Query: 385 GXXXXXXXXXXXXXXXXXXXXNMEPSNQLPENDRKRSRKDSISKTKEEIEAEYKAASLTT 444
N+E SNQL ENDRK+S+K+ ISKT+EE+EA+YKAASL
Sbjct: 391 VMAKRIEDDQKFKNKKSKKRKNLEASNQL-ENDRKKSKKEMISKTREEVEADYKAASLAP 449
Query: 445 DVMERRQMQTETLSAVFETYFRILKHTMHSVVARPEENPDALSAGVEPHPLLAPCLKGLA 504
DVME++QMQTETLSAVFETYFRILK TM S+ ARPE N ALSA VEP PLLAPCLKGLA
Sbjct: 450 DVMEKKQMQTETLSAVFETYFRILKKTMQSIGARPEANAGALSAAVEPLPLLAPCLKGLA 509
Query: 505 KFSHLLDLDFMGDLMNHLKVLASGSSNSGNTSEKCPKCLSVSERLQCCIVAFKVMRINLE 564
KFSHL+DLDFMGDLMNHL+VLASGSSNSGNTS+KC KCL+VSERLQCCIVAFKVMR NL+
Sbjct: 510 KFSHLIDLDFMGDLMNHLRVLASGSSNSGNTSDKCSKCLTVSERLQCCIVAFKVMRNNLD 569
Query: 565 ALNVDLQDFLVHLYNLIVEYRPGRDQGEVLAEALKIMLCDDRQQDMQKAAAFIKRLATLS 624
ALNVDLQDF +HLYNL++EYRPGRDQGEVLAEALKIMLCDD+Q DMQK AAFIKRLATLS
Sbjct: 570 ALNVDLQDFFLHLYNLVLEYRPGRDQGEVLAEALKIMLCDDKQHDMQKTAAFIKRLATLS 629
Query: 625 LCVGSADSMAALV 637
LCVGSADSMA ++
Sbjct: 630 LCVGSADSMAGIL 642
>Glyma11g20830.1
Length = 242
Score = 205 bits (522), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 127/249 (51%), Positives = 148/249 (59%), Gaps = 46/249 (18%)
Query: 32 QFVKDNRAFASLLSTLDTQSITRHVTRVADAKDDALE-KLYEQRMQKTALKKEKEETG-- 88
QF+K+N A+ASL+STLDT SIT+ + + + L+ + + + K ALKKEKEETG
Sbjct: 31 QFIKENCAYASLVSTLDTHSITKFASSLFYSVTPYLQCYILRKLLAKNALKKEKEETGLQ 90
Query: 89 -----SLPIKTLDGKLYYRTATNRVSENGPNEEEAGEDENVDKGLVXXXXXXXXXXXXXX 143
+LPIKTLDGK++Y TAT V EN P+EE GED N DKG+V
Sbjct: 91 VDRVDALPIKTLDGKIHYGTATKTVLENDPSEEGTGEDVNKDKGMVKLTKAEKRAKLKKM 150
Query: 144 XXXXXXXXXXVPKAEVEETPQAAVLAEVKEDLEAEETFETKKCKLAELGNALLTDPESNI 203
V KAEVEETPQAAVLAEVKEDL AEE FE+KK KLAELGNALLTDP+
Sbjct: 151 RKEAKQQGKEVAKAEVEETPQAAVLAEVKEDLTAEEAFESKKHKLAELGNALLTDPD--- 207
Query: 204 KFLKEMVQISKDNDHTIVKLGLLSLLAVFKDIVPGYRIRLPTEKEQEMKVSKTVRKMRYY 263
YRIRLPTEKE EMKVSKTVRKMRYY
Sbjct: 208 -----------------------------------YRIRLPTEKELEMKVSKTVRKMRYY 232
Query: 264 ESTLLSSYK 272
ES+LLS+YK
Sbjct: 233 ESSLLSAYK 241
>Glyma07g24660.1
Length = 143
Score = 127 bits (318), Expect = 7e-29, Method: Composition-based stats.
Identities = 62/72 (86%), Positives = 66/72 (91%)
Query: 589 DQGEVLAEALKIMLCDDRQQDMQKAAAFIKRLATLSLCVGSADSMAALVTVKHLLQKNVK 648
+QGEVLA ALKIMLCDD+Q DM+K AA+IKRLATLSLCVGSADSMAALV VKHLLQKNVK
Sbjct: 38 NQGEVLAGALKIMLCDDKQHDMRKTAAYIKRLATLSLCVGSADSMAALVIVKHLLQKNVK 97
Query: 649 CRNLLENDIGGG 660
C NLLENDIG G
Sbjct: 98 CINLLENDIGWG 109
>Glyma11g16020.1
Length = 90
Score = 81.6 bits (200), Expect = 4e-15, Method: Composition-based stats.
Identities = 35/41 (85%), Positives = 40/41 (97%)
Query: 562 NLEALNVDLQDFLVHLYNLIVEYRPGRDQGEVLAEALKIML 602
NL+ALNVDLQDF +HLYNL++EYRPGRDQGEVL+EALKIML
Sbjct: 2 NLDALNVDLQDFFLHLYNLVLEYRPGRDQGEVLSEALKIML 42