Miyakogusa Predicted Gene

Lj1g3v2300720.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2300720.2 tr|A9RW32|A9RW32_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,50.65,0.00000000000005, ,CUFF.28837.2
         (91 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g01700.1                                                       147   2e-36
Glyma07g39830.1                                                       135   1e-32
Glyma17g33210.1                                                        68   2e-12
Glyma14g13180.1                                                        60   4e-10

>Glyma09g01700.1 
          Length = 1382

 Score =  147 bits (372), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 72/86 (83%), Positives = 77/86 (89%), Gaps = 3/86 (3%)

Query: 5   LVKSYLPIKDALVRPGIDGLLDILRNMLSYGEISKDLKSSSVDKAHLRLTSAMAILRLSR 64
           +VKSYLPIKDA VRPGIDGLLDILRNMLSYGEISKDL+SSSVDKAHLRL SA A+LRLSR
Sbjct: 774 IVKSYLPIKDAHVRPGIDGLLDILRNMLSYGEISKDLQSSSVDKAHLRLASAKAVLRLSR 833

Query: 65  LWDHKIPADIFHLTLRTSEVMHSPFP 90
           LWDHKIP DIFHLTLR +E+    FP
Sbjct: 834 LWDHKIPVDIFHLTLRATEI---SFP 856


>Glyma07g39830.1 
          Length = 1655

 Score =  135 bits (339), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 67/86 (77%), Positives = 73/86 (84%), Gaps = 3/86 (3%)

Query: 5   LVKSYLPIKDALVRPGIDGLLDILRNMLSYGEISKDLKSSSVDKAHLRLTSAMAILRLSR 64
            VKSYLP+KDA VRP ID LLDILRN+L YGEISKDLKSSSVDKAHL+L SA A+LRLSR
Sbjct: 802 FVKSYLPVKDAHVRPDIDRLLDILRNILLYGEISKDLKSSSVDKAHLKLASAKAVLRLSR 861

Query: 65  LWDHKIPADIFHLTLRTSEVMHSPFP 90
           LWDHKIP D+FHLTLR SE+    FP
Sbjct: 862 LWDHKIPVDLFHLTLRVSEI---SFP 884


>Glyma17g33210.1 
          Length = 266

 Score = 67.8 bits (164), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 32/39 (82%), Positives = 35/39 (89%)

Query: 5  LVKSYLPIKDALVRPGIDGLLDILRNMLSYGEISKDLKS 43
          +VKSYLPIKDA V PGIDGLL+IL NMLSYGEISKD +S
Sbjct: 45 IVKSYLPIKDAHVCPGIDGLLNILINMLSYGEISKDFQS 83


>Glyma14g13180.1 
          Length = 122

 Score = 60.5 bits (145), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 31/42 (73%), Positives = 36/42 (85%)

Query: 5  LVKSYLPIKDALVRPGIDGLLDILRNMLSYGEISKDLKSSSV 46
          +VKSYLPIKDA V  GIDGLL+IL NMLSY EISKDL+ S++
Sbjct: 33 IVKSYLPIKDAYVHLGIDGLLNILINMLSYREISKDLQLSAL 74