Miyakogusa Predicted Gene

Lj1g3v2268400.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2268400.1 Non Chatacterized Hit- tr|I1H8K9|I1H8K9_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,50,3e-17,seg,NULL,CUFF.28768.1
         (107 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g02220.1                                                       112   7e-26
Glyma04g02120.1                                                       111   2e-25

>Glyma06g02220.1 
          Length = 132

 Score =  112 bits (281), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 60/91 (65%), Positives = 62/91 (68%)

Query: 1   MITRSNLAEQLREYQIRSKHDWXXXXXXXXXXXXXXXXKVDVVVFVIWELVILAFLVFSV 60
           MITRSNL EQLREYQIRSKHDW                +VDVVVFVIWELVILAFLVFSV
Sbjct: 26  MITRSNLVEQLREYQIRSKHDWASVSFFSSTSSNITTSRVDVVVFVIWELVILAFLVFSV 85

Query: 61  VSLYFKHIQLAFXXXXXXXXXXXXMKITKQV 91
           VSLYFKHI+LAF            MKITKQV
Sbjct: 86  VSLYFKHIRLAFILVCITILLLLCMKITKQV 116


>Glyma04g02120.1 
          Length = 107

 Score =  111 bits (278), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 59/91 (64%), Positives = 62/91 (68%)

Query: 1  MITRSNLAEQLREYQIRSKHDWXXXXXXXXXXXXXXXXKVDVVVFVIWELVILAFLVFSV 60
          MITRSNL EQLREYQIRSKHDW                +VDVV+FVIWELVILAFLVFSV
Sbjct: 1  MITRSNLVEQLREYQIRSKHDWASVSFFSSTSSNITTSRVDVVLFVIWELVILAFLVFSV 60

Query: 61 VSLYFKHIQLAFXXXXXXXXXXXXMKITKQV 91
          VSLYFKHI+LAF            MKITKQV
Sbjct: 61 VSLYFKHIRLAFILVCITILLLLCMKITKQV 91