Miyakogusa Predicted Gene

Lj1g3v2268380.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2268380.1 Non Chatacterized Hit- tr|K3Y058|K3Y058_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si007569,47.47,2e-16,seg,NULL; coiled-coil,NULL,CUFF.28761.1
         (113 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g02230.1                                                       134   3e-32
Glyma04g02130.1                                                       125   8e-30

>Glyma06g02230.1 
          Length = 109

 Score =  134 bits (336), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 68/91 (74%), Positives = 74/91 (81%)

Query: 22  KRKLGFFANVIKRKDSFIQLFAMTGILLLSMRSLGQKYRIHGLEEDTHALREEHDSLNER 81
           KR LGF A+  +RKDSFIQ FAMTGILLLSMRSL QKY+IHGL+ED HALR EHDSL +R
Sbjct: 18  KRILGFMAHAKQRKDSFIQFFAMTGILLLSMRSLSQKYKIHGLQEDIHALRVEHDSLTDR 77

Query: 82  MKNIKLGLRREASQDPTGLFASRLHALFDEQ 112
           + NIK  L REAS DPTGLFASRL  LF EQ
Sbjct: 78  INNIKNDLLREASHDPTGLFASRLRHLFAEQ 108


>Glyma04g02130.1 
          Length = 109

 Score =  125 bits (315), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 64/91 (70%), Positives = 73/91 (80%)

Query: 22  KRKLGFFANVIKRKDSFIQLFAMTGILLLSMRSLGQKYRIHGLEEDTHALREEHDSLNER 81
           ++ LGF A+  +RKDSFIQ FAMTGILLLSMRSL QKY+IHGL+ED HALR +H SL +R
Sbjct: 18  RKILGFMAHAKQRKDSFIQFFAMTGILLLSMRSLSQKYKIHGLQEDIHALRVDHGSLTDR 77

Query: 82  MKNIKLGLRREASQDPTGLFASRLHALFDEQ 112
           + NIK  L REASQD TGLFASRL  LF EQ
Sbjct: 78  INNIKNDLLREASQDSTGLFASRLRHLFAEQ 108