Miyakogusa Predicted Gene

Lj1g3v2264820.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2264820.1 Non Chatacterized Hit- tr|D8TJU3|D8TJU3_VOLCA
Putative uncharacterized protein OS=Volvox carteri
GN=,44.96,5e-19,seg,NULL; cyanin_plasto: plastocyanin,Plastocyanin;
COPPER_BLUE,Blue (type 1) copper domain; Copper-,CUFF.28771.1
         (167 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g02240.1                                                       216   1e-56
Glyma06g02300.1                                                       209   1e-54

>Glyma04g02240.1 
          Length = 165

 Score =  216 bits (549), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 113/167 (67%), Positives = 118/167 (70%), Gaps = 2/167 (1%)

Query: 1   MATVTSTAVAIPSFTGLXXXXXXXXXXXXXXXXXXQMPRLSVKASLKDFGXXXXXXXXXX 60
           MATVTS AVAIPSFTGL                  Q  RL +KASLKD G          
Sbjct: 1   MATVTSAAVAIPSFTGLKASAGKVSAAVKVSAP--QATRLGIKASLKDVGVAVVATAASA 58

Query: 61  XXXXXXXXIEILLGSDDGGLAFVPNSFSVAPGEKITFKNNAGFPHNVVFDEDEVPGGVDA 120
                   IE+LLG DDG LAFVPN+FSVA GEKI FKNNAGFPHNVVFDEDE+P GVDA
Sbjct: 59  VLASNAMAIEVLLGGDDGSLAFVPNNFSVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 118

Query: 121 SKISMSDEDLLNAPGETYSVTLDAKGTYKFYCSPHQGAGMVGSVTVN 167
            KISMSDEDLLNAPGETYSVTLDAKGTY F+CSPHQGAGMVG VTVN
Sbjct: 119 GKISMSDEDLLNAPGETYSVTLDAKGTYSFFCSPHQGAGMVGKVTVN 165


>Glyma06g02300.1 
          Length = 167

 Score =  209 bits (532), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 108/167 (64%), Positives = 114/167 (68%)

Query: 1   MATVTSTAVAIPSFTGLXXXXXXXXXXXXXXXXXXQMPRLSVKASLKDFGXXXXXXXXXX 60
           MATVTS AV+IPSFTGL                        +KASLKD G          
Sbjct: 1   MATVTSAAVSIPSFTGLKASAGKVSAAAVKVSAPQATRFCGIKASLKDVGVAVVATAASA 60

Query: 61  XXXXXXXXIEILLGSDDGGLAFVPNSFSVAPGEKITFKNNAGFPHNVVFDEDEVPGGVDA 120
                   IE+LLG+DDG L F PNSFSVAPGEKI FKNNAGFPHNVVFDEDE+P GVDA
Sbjct: 61  VLASNAMAIEVLLGTDDGSLVFSPNSFSVAPGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 SKISMSDEDLLNAPGETYSVTLDAKGTYKFYCSPHQGAGMVGSVTVN 167
            KISMS+EDLLNA GETYSVTLDAKGTY FYCSPHQGAGMVG VTVN
Sbjct: 121 GKISMSEEDLLNAAGETYSVTLDAKGTYSFYCSPHQGAGMVGKVTVN 167