Miyakogusa Predicted Gene

Lj1g3v2173050.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2173050.1 tr|B9H4W6|B9H4W6_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_559829 PE=4 SV=1,38.75,1e-17,
,CUFF.28688.1
         (511 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g37740.1                                                       363   e-100
Glyma06g02710.1                                                       355   9e-98
Glyma04g02680.1                                                       354   1e-97
Glyma06g02700.1                                                        71   2e-12

>Glyma17g37740.1 
          Length = 592

 Score =  363 bits (933), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 237/490 (48%), Positives = 295/490 (60%), Gaps = 50/490 (10%)

Query: 1   MFPIINGSEDRTELDRESLPEKSLVLQGHKECANA-----TFEASGTTQDASLISNRSPT 55
           MFP    + + T+LD + LP+ S VLQ  ++ A+A     +  AS T   AS   + S  
Sbjct: 77  MFPHNASNHNSTDLDGKFLPDNSSVLQDLEDNASAAALQDSILASATAPVASPSYHESSA 136

Query: 56  GDA-KISSSNKTSGQEQADRTASNT------------NMQAVPMIVRSENGREVASHDTE 102
           G+A KIS  N+  GQ+Q D   S T            N+Q +P+  + EN  +VA HD+E
Sbjct: 137 GEASKISWLNEAVGQKQPDFPESATLLMPSHSTSLTINLQTMPVAAKRENSNKVALHDSE 196

Query: 103 LCLEMGLNVTAQS----LNSHPDVEFEMAGGIDCKLKQHIIKHWKENEGPALWSALSSRG 158
           LCL MGLN+   S    +    DV FE    +DCK +QH+IK  K N G ALW  LS   
Sbjct: 197 LCLAMGLNMPKLSRISQVERKTDVAFEAVRDVDCKQQQHLIKEQKGN-GLALWPGLSPVA 255

Query: 159 SARMDASELQSSVAKAPNWLNAAIYASKQDLKQSFSSGDKKQTSEVVIRRKSWKKCAAHV 218
            A    + L+SS  KAP+WL AAI ASK D   S  +        + I ++SWKKCAAHV
Sbjct: 256 PA--GQAYLRSSATKAPDWLEAAIRASKMD---SMETSTCSSRGRIFIPKRSWKKCAAHV 310

Query: 219 HISHLIRSLEVPNGQVAKEPD-------RVHHGTECGVLLETHNLNWMSNSNRSASGIVH 271
           HISH+I+SLEVP  QV KE +       R H G + GVLL+ H+ N M N      GI  
Sbjct: 311 HISHIIKSLEVPKTQVFKETEFFECHQMREHEGPKRGVLLKVHSSNEMKN------GI-- 362

Query: 272 SATVRSSHETKSGTPQQHSRYHDMSQT-PAPGV-YGPQKQ-NFNFLSLSVGGTGLKVNNG 328
           ++TVR+ HE+K+   +Q   Y ++SQ  P P V YG QKQ NFNFLSLS G  GLK+ N 
Sbjct: 363 TSTVRNPHESKNIILRQQCHYRNISQAAPTPVVQYGHQKQQNFNFLSLSAGSNGLKLENN 422

Query: 329 FNEGRSRLELLSKSQVPYFQSLQQQHGLMPLPTPQSQYASSTSYLDQLPAAGPQVRLQQP 388
           +N+  S LE LSK QVPY QSL   HG +P+P  Q QYAS TSYLDQL  AGP+VRLQQP
Sbjct: 423 YNKIGSMLEPLSKLQVPYLQSLAPLHGGIPIPAVQRQYAS-TSYLDQLSVAGPEVRLQQP 481

Query: 389 HYYGTPLCGTQYSSTASYKQQQ-QSFWAVQLAANGGSSSVNCNIVRAQYPNWQQNGRVDS 447
           HY+G PL GT Y ST S+KQQ+ QSFW VQ  A  G S+VN NI+R QYPNW Q+GR DS
Sbjct: 482 HYFGNPLYGTHYGSTVSHKQQEHQSFWGVQ-QAEQGRSTVNFNILRTQYPNW-QSGRHDS 539

Query: 448 CAVSPFAQVI 457
            A+SP AQ I
Sbjct: 540 SALSPCAQAI 549


>Glyma06g02710.1 
          Length = 350

 Score =  355 bits (910), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 215/362 (59%), Positives = 247/362 (68%), Gaps = 40/362 (11%)

Query: 178 LNAAIYASKQDLKQSFSSGDKKQTSEVVIRRKSWKKCAAHVHISHLIRSLEVPNGQVAKE 237
           +  A+  SKQDL ++ SSG K   SE++  +KSWK+CAAHVHISHLIRSLEV   Q  KE
Sbjct: 1   MKTAMGVSKQDLMETCSSGGK--ISEIITHKKSWKRCAAHVHISHLIRSLEVSKRQAGKE 58

Query: 238 PDR-----VHHGTECGVLLETHNLNWMSNSNRSASGIVHSATVRSSHETKSGTPQQHSRY 292
            +      VH G++CGVL + HNLNWM + N  A+  V+SAT  +S ETK+G   QH  Y
Sbjct: 59  HELFPQTIVHQGSKCGVLTKAHNLNWMRSGNSHATQTVYSATTSNSRETKNGI-LQHDLY 117

Query: 293 HDMSQTPAPGVYGPQKQNFNFLSLSVGGTG-LKVNNGFNEGRSRLELLSKSQVPYFQSLQ 351
           H+    P PGVY PQKQ FNFLSLS G +  LK N  FN+G S+LE  SK Q+PYFQSLQ
Sbjct: 118 HEA--PPTPGVYDPQKQCFNFLSLSTGVSDQLKANEIFNKGESKLEPYSKQQLPYFQSLQ 175

Query: 352 QQ----HGLMPLPTPQSQYASSTSYLDQLPAAGPQVRLQQ---PHYYGTPLCGTQYSSTA 404
            Q    HGLMP+ +  S YAS+  +LDQLP AGPQVRLQQ   PHYYGTPL G+ YSST 
Sbjct: 176 LQQQRQHGLMPVQS--SPYAST--FLDQLPVAGPQVRLQQQHLPHYYGTPLRGSHYSSTV 231

Query: 405 SYKQQQQSFWAVQLAANGGSSSVNCNIVRAQYPNWQQNGRVDS-----------CAVSPF 453
           SYKQQ QSFWAVQLAA GGSSSVNC+IVRAQYPNW QNGR DS            ++  F
Sbjct: 232 SYKQQHQSFWAVQLAAQGGSSSVNCSIVRAQYPNW-QNGRHDSSVPQVILPHSPASLETF 290

Query: 454 AQVISSISQQKPLTLASSLHPSRTIGLDIHLP-SVCEESMARFRS---SGTPSLQLLCDE 509
              I+SIS Q   TLASS   SR  G DIHL  SVCEES  RFRS   SGTPSLQLLCDE
Sbjct: 291 GSKITSISDQHLFTLASSR--SRANGQDIHLASSVCEESKGRFRSSNNSGTPSLQLLCDE 348

Query: 510 RL 511
           R+
Sbjct: 349 RI 350


>Glyma04g02680.1 
          Length = 339

 Score =  354 bits (909), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 207/348 (59%), Positives = 241/348 (69%), Gaps = 37/348 (10%)

Query: 191 QSFSSGDKKQTSEVVIRRKSWKKCAAHVHISHLIRSLEVPNGQVAKEPD-----RVHHGT 245
           +S SSG K   SE++  +KSWK+CAAHVHISHLIRSLEV   QV KE +     RVH G+
Sbjct: 2   ESCSSGGK--ISEIITHKKSWKRCAAHVHISHLIRSLEVSKRQVGKEHELCPQTRVHQGS 59

Query: 246 ECGVLLETHNLNWMSNSNRSASGIVHSATVRSSHETKSGTPQQHSRYHDMSQTP-APGVY 304
           +CGVL + HNLNWM + N  A+  V+SAT  +S ETK+G   QH  YH+ SQ P  PGVY
Sbjct: 60  KCGVLTQAHNLNWMRSGNSHATRTVYSATTSNSRETKNGI-LQHGLYHEKSQAPPTPGVY 118

Query: 305 GPQKQNFNFLSLSVGGTGLKVNNGFNEGRSRLELLSKSQVPYFQSLQQQH---GLMPLPT 361
            PQKQ  NFLSLS  G+ LKVN  FN+G S+LE  SK Q+PYFQSL QQ    GLMP+ +
Sbjct: 119 DPQKQCSNFLSLSTRGSELKVNESFNKGESKLEPYSKQQLPYFQSLHQQQQQHGLMPIQS 178

Query: 362 PQSQYASSTSYLDQLPAAGPQVRLQQPHYYGTPLCGTQYSSTASYKQQQQSFWAVQLAAN 421
             S YAS+  +LDQLP AGPQVRLQQPHYYGTPL GT YSST SYKQQQQSFWAVQLAA 
Sbjct: 179 --STYAST--FLDQLPVAGPQVRLQQPHYYGTPLRGTHYSSTVSYKQQQQSFWAVQLAAQ 234

Query: 422 GGSSSVNCNIVRAQYPNWQQNGRVD---------------SCAVSPFAQVISSISQQKPL 466
           GGSSS+NC+IVRAQYPNW Q+GR D               S ++      I+SIS+Q   
Sbjct: 235 GGSSSMNCSIVRAQYPNW-QSGRHDSSVAQVILPHSPASASASLETLGSKITSISEQNLF 293

Query: 467 TLASSLHPSRTIGLDIHLP-SVCEESMARFRS--SGTPSLQLLCDERL 511
           + ASS   SR  G  I+L  SVC+ES  RFRS  SGTPSLQLLCDER+
Sbjct: 294 SFASSR--SRANGQGIYLASSVCDESKGRFRSSNSGTPSLQLLCDERI 339


>Glyma06g02700.1 
          Length = 248

 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/102 (50%), Positives = 57/102 (55%), Gaps = 18/102 (17%)

Query: 1   MFPIINGSED-RTELDRESLPEKSLVLQGHKEC--ANATFEASGTTQDASLISNRSPTGD 57
           MFP    S   ++ELD ESLPE S VLQ  +E   AN T EASG TQDA     +SPTG 
Sbjct: 143 MFPSDKASNVVKSELDSESLPENSTVLQDQEESQSANVTLEASGATQDAG---EKSPTGC 199

Query: 58  AKISSSNKTSGQEQ------------ADRTASNTNMQAVPMI 87
            K SS N+T GQEQ             D TA  TN QAVPM+
Sbjct: 200 KKASSLNETIGQEQTDFPESANFLVATDNTAPKTNPQAVPMM 241