Miyakogusa Predicted Gene

Lj1g3v2172910.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2172910.1 Non Chatacterized Hit- tr|D8T0B3|D8T0B3_SELML
Putative uncharacterized protein E2F1-2
OS=Selaginella,42.28,2e-19,seg,NULL; TRANSCRIPTION FACTOR E2F,NULL;
TRANSCRIPTION FACTOR E2F,E2F Family; coiled-coil,NULL;
E2F-,CUFF.28683.1
         (153 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g02720.2                                                       207   4e-54
Glyma04g02720.1                                                       207   4e-54
Glyma06g02740.1                                                       197   3e-51
Glyma12g09860.1                                                       110   6e-25
Glyma02g35850.1                                                       109   1e-24
Glyma10g09410.1                                                       107   3e-24
Glyma11g18400.1                                                       104   3e-23
Glyma02g35850.2                                                        99   2e-21
Glyma10g11780.1                                                        93   9e-20
Glyma16g19460.1                                                        89   2e-18

>Glyma04g02720.2 
          Length = 343

 Score =  207 bits (526), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 101/148 (68%), Positives = 114/148 (77%)

Query: 3   LKNRGCDGLGPRELDDQVNCLKAEIESLYAEECELEDCIXXXXXXXXXXXXXXXSQKYLF 62
           +K +GCDGLGPREL+DQVN LKAE++SLYAEEC+L+DCI               SQKYLF
Sbjct: 135 IKWKGCDGLGPRELEDQVNSLKAEVDSLYAEECKLDDCIRKKQELLRNLEESESSQKYLF 194

Query: 63  VNKEDILTLPCFQNQELIAIKAPKASVIEVPDPDEELGFRQRQYKMTVRSATGPIHLYHL 122
           + KEDIL LPCFQNQE+IAIKAPKAS IEVPDPDEELGFRQRQYKM VRSA GPI+LY L
Sbjct: 195 ITKEDILGLPCFQNQEIIAIKAPKASSIEVPDPDEELGFRQRQYKMIVRSAIGPIYLYLL 254

Query: 123 RKQERKFEDCGAKQMKSIDPSLNNDHCR 150
            K + KFED  AK MK  +PS N+D  R
Sbjct: 255 SKDDHKFEDDSAKPMKLTNPSWNSDLYR 282


>Glyma04g02720.1 
          Length = 343

 Score =  207 bits (526), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 101/148 (68%), Positives = 114/148 (77%)

Query: 3   LKNRGCDGLGPRELDDQVNCLKAEIESLYAEECELEDCIXXXXXXXXXXXXXXXSQKYLF 62
           +K +GCDGLGPREL+DQVN LKAE++SLYAEEC+L+DCI               SQKYLF
Sbjct: 135 IKWKGCDGLGPRELEDQVNSLKAEVDSLYAEECKLDDCIRKKQELLRNLEESESSQKYLF 194

Query: 63  VNKEDILTLPCFQNQELIAIKAPKASVIEVPDPDEELGFRQRQYKMTVRSATGPIHLYHL 122
           + KEDIL LPCFQNQE+IAIKAPKAS IEVPDPDEELGFRQRQYKM VRSA GPI+LY L
Sbjct: 195 ITKEDILGLPCFQNQEIIAIKAPKASSIEVPDPDEELGFRQRQYKMIVRSAIGPIYLYLL 254

Query: 123 RKQERKFEDCGAKQMKSIDPSLNNDHCR 150
            K + KFED  AK MK  +PS N+D  R
Sbjct: 255 SKDDHKFEDDSAKPMKLTNPSWNSDLYR 282


>Glyma06g02740.1 
          Length = 325

 Score =  197 bits (502), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 99/148 (66%), Positives = 114/148 (77%), Gaps = 4/148 (2%)

Query: 3   LKNRGCDGLGPRELDDQVNCLKAEIESLYAEECELEDCIXXXXXXXXXXXXXXXSQKYLF 62
           ++ +GCDGLGP+EL+DQVN LKAE++SLYAEE EL+DCI               SQKYLF
Sbjct: 136 IQWKGCDGLGPQELEDQVNSLKAEVDSLYAEESELDDCIRKKQELLRNLEESESSQKYLF 195

Query: 63  VNKEDILTLPCFQNQELIAIKAPKASVIEVPDPDEELGFRQRQYKMTVRSATGPIHLYHL 122
           + KEDIL+LPCFQNQE+IAIKAPKAS IEVPDPDEELGFRQRQYKM VRSA GPI+LY L
Sbjct: 196 LTKEDILSLPCFQNQEIIAIKAPKASCIEVPDPDEELGFRQRQYKMIVRSAIGPINLYLL 255

Query: 123 RKQERKFEDCGAKQMKSIDPSLNNDHCR 150
                KFED  AK+MK +DPS N+D  R
Sbjct: 256 ----SKFEDDSAKRMKLMDPSWNSDPIR 279


>Glyma12g09860.1 
          Length = 450

 Score =  110 bits (275), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 61/145 (42%), Positives = 83/145 (57%), Gaps = 4/145 (2%)

Query: 3   LKNR----GCDGLGPRELDDQVNCLKAEIESLYAEECELEDCIXXXXXXXXXXXXXXXSQ 58
           LKNR    G D   P E DD    L+AE+E+L  +E +L++ I               + 
Sbjct: 188 LKNRIQWKGLDVSRPGEADDSFASLQAEVENLTMKERQLDEQIREMQERLRDLSEDENND 247

Query: 59  KYLFVNKEDILTLPCFQNQELIAIKAPKASVIEVPDPDEELGFRQRQYKMTVRSATGPIH 118
           K LFV +EDI  LPCFQN+ LIAIKAP  + +EVPDPDE + + QR+Y++ +RS  GPI 
Sbjct: 248 KLLFVTEEDIKNLPCFQNETLIAIKAPHGTTLEVPDPDEAVDYLQRRYRIVLRSTMGPID 307

Query: 119 LYHLRKQERKFEDCGAKQMKSIDPS 143
           LY + + E KFE+     +    PS
Sbjct: 308 LYLVSQFEEKFEEINGADVAPKLPS 332


>Glyma02g35850.1 
          Length = 468

 Score =  109 bits (272), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 59/142 (41%), Positives = 83/142 (58%), Gaps = 4/142 (2%)

Query: 3   LKNR----GCDGLGPRELDDQVNCLKAEIESLYAEECELEDCIXXXXXXXXXXXXXXXSQ 58
           LKNR    G +     E+D  ++ LKAE+E L  EE  L+D I               +Q
Sbjct: 205 LKNRIHWKGIESSTSGEVDGDISVLKAEVEKLSLEEQGLDDQIREMQERLRNLSENENNQ 264

Query: 59  KYLFVNKEDILTLPCFQNQELIAIKAPKASVIEVPDPDEELGFRQRQYKMTVRSATGPIH 118
           K LFV +EDI  LPCFQN+ LIAIKAP  + +EVPDP+E + + QR+Y++ +RS  GPI 
Sbjct: 265 KCLFVTEEDIKGLPCFQNETLIAIKAPHGTTLEVPDPEEAVDYPQRRYRIILRSTMGPID 324

Query: 119 LYHLRKQERKFEDCGAKQMKSI 140
           +Y + + E KFE+    ++  I
Sbjct: 325 VYLISQFEEKFEEVNGAELPMI 346


>Glyma10g09410.1 
          Length = 466

 Score =  107 bits (268), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 57/142 (40%), Positives = 83/142 (58%), Gaps = 4/142 (2%)

Query: 3   LKNR----GCDGLGPRELDDQVNCLKAEIESLYAEECELEDCIXXXXXXXXXXXXXXXSQ 58
           LKNR    G +     ++D  ++ LKAE+E L  EE  ++D I               +Q
Sbjct: 205 LKNRIHWKGIESATSGDVDGDISLLKAEVEKLSLEEQGIDDQIREMQERLRNLSENENNQ 264

Query: 59  KYLFVNKEDILTLPCFQNQELIAIKAPKASVIEVPDPDEELGFRQRQYKMTVRSATGPIH 118
           K LFV +EDI  LPCFQN+ LIAIKAP  + +EVPDP+E + + QR+Y++ +RS  GPI 
Sbjct: 265 KCLFVTEEDIKDLPCFQNETLIAIKAPHGTTLEVPDPEEAVDYPQRRYRIILRSTMGPID 324

Query: 119 LYHLRKQERKFEDCGAKQMKSI 140
           +Y + + E KFE+    ++  I
Sbjct: 325 VYLISQFEEKFEEVNGAELPMI 346


>Glyma11g18400.1 
          Length = 296

 Score =  104 bits (260), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 60/145 (41%), Positives = 82/145 (56%), Gaps = 21/145 (14%)

Query: 3   LKNR----GCDGLGPRELDDQVNCLKAEIESLYAEECELEDCIXXXXXXXXXXXXXXXSQ 58
           LKNR    G D   P E DD    L+AE+E+L  +E +L++ I                 
Sbjct: 51  LKNRIQWKGLDVSRPGEADDSFPSLQAEVENLTMKERQLDEQI----------------- 93

Query: 59  KYLFVNKEDILTLPCFQNQELIAIKAPKASVIEVPDPDEELGFRQRQYKMTVRSATGPIH 118
           + LFV +EDI  LPCFQN+ LIAIKAP  + +EVPDPDE + + QR+Y++ +RS  GPI 
Sbjct: 94  RLLFVTEEDIKNLPCFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSTMGPID 153

Query: 119 LYHLRKQERKFEDCGAKQMKSIDPS 143
           LY + + E KFE+     +    PS
Sbjct: 154 LYLVSQFEEKFEEINGVDVAPKLPS 178


>Glyma02g35850.2 
          Length = 421

 Score = 99.0 bits (245), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 53/134 (39%), Positives = 77/134 (57%), Gaps = 17/134 (12%)

Query: 7   GCDGLGPRELDDQVNCLKAEIESLYAEECELEDCIXXXXXXXXXXXXXXXSQKYLFVNKE 66
           G +     E+D  ++ LKAE+E L  EE  L+D I                 + LFV +E
Sbjct: 183 GIESSTSGEVDGDISVLKAEVEKLSLEEQGLDDQI-----------------RCLFVTEE 225

Query: 67  DILTLPCFQNQELIAIKAPKASVIEVPDPDEELGFRQRQYKMTVRSATGPIHLYHLRKQE 126
           DI  LPCFQN+ LIAIKAP  + +EVPDP+E + + QR+Y++ +RS  GPI +Y + + E
Sbjct: 226 DIKGLPCFQNETLIAIKAPHGTTLEVPDPEEAVDYPQRRYRIILRSTMGPIDVYLISQFE 285

Query: 127 RKFEDCGAKQMKSI 140
            KFE+    ++  I
Sbjct: 286 EKFEEVNGAELPMI 299


>Glyma10g11780.1 
          Length = 228

 Score = 93.2 bits (230), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 49/75 (65%), Positives = 55/75 (73%), Gaps = 8/75 (10%)

Query: 76  NQELIAIKAPKASVIEVPDPDEELGFRQRQYKMTVRSATGPIHLYHLRKQERKFEDCGAK 135
           NQE+IAIKAPKAS IEVPDPDE        YKM VRSA GPI+LY L K +RKFED  AK
Sbjct: 99  NQEIIAIKAPKASCIEVPDPDE--------YKMIVRSAIGPINLYLLSKDDRKFEDDSAK 150

Query: 136 QMKSIDPSLNNDHCR 150
           +MK +DPS N+D  R
Sbjct: 151 RMKLMDPSWNSDPIR 165


>Glyma16g19460.1 
          Length = 224

 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 48/92 (52%), Positives = 61/92 (66%), Gaps = 8/92 (8%)

Query: 59  KYLFVNKEDILTLPCFQNQELIAIKAPKASVIEVPDPDEELGFRQRQYKMTVRSATGPIH 118
           +YLF+ KEDIL+LPCFQNQE+IAIKAPKAS IEVPDPDE +     +   T +  +    
Sbjct: 120 RYLFLIKEDILSLPCFQNQEIIAIKAPKASCIEVPDPDEAVQNDCSKCHWTNKFVS---- 175

Query: 119 LYHLRKQERKFEDCGAKQMKSIDPSLNNDHCR 150
                + +RKFED  A +MK +DPS N+D  R
Sbjct: 176 ----LEDDRKFEDDSANRMKLMDPSWNSDSIR 203