Miyakogusa Predicted Gene
- Lj1g3v2155540.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2155540.1 Non Chatacterized Hit- tr|I1MNV7|I1MNV7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,80.13,0,glycine rich
nucleic binding domain,G-patch domain; coiled-coil,NULL; GCFC,GC-rich
sequence DNA-bind,CUFF.28650.1
(872 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma16g27070.1 1126 0.0
Glyma02g08060.1 1085 0.0
Glyma18g03590.1 346 8e-95
Glyma17g11300.1 61 6e-09
Glyma17g11300.2 60 1e-08
Glyma17g11300.3 60 2e-08
Glyma13g22490.1 59 2e-08
Glyma03g38720.1 51 5e-06
Glyma19g41310.1 51 6e-06
>Glyma16g27070.1
Length = 741
Score = 1126 bits (2912), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 566/743 (76%), Positives = 595/743 (80%), Gaps = 21/743 (2%)
Query: 131 FNSGRAAXXXXXXXXXXXXXXXXXKFLPTAFGKMIKEGAXXXXXXXXXXXXXXXXGDRQG 190
FNSG AA FLPTAFGK IKEGA G Q
Sbjct: 19 FNSGNAANGSNRNDDSDENDDN--SFLPTAFGKKIKEGAMRRERERERERLEKKRGKHQS 76
Query: 191 AAGQDVSGDVGKFEKHTKGIGMKLLERMGYKGGGLGKNEQGILKPIEARLRAKNSGLGFN 250
A GIG+KLLE+MGYKGGGLGKNEQGIL PIEA+LRAKNSG+GFN
Sbjct: 77 A-----------------GIGLKLLEKMGYKGGGLGKNEQGILAPIEAKLRAKNSGIGFN 119
Query: 251 NETPAAPLPALQVESQSVSEAAQPTVGRTXXXXXXXXXXXXXXXXXXXYVTAEQLLASKQ 310
PLP LQ E ++V E QP VGR Y+TAE+LLASKQ
Sbjct: 120 ESKETMPLPVLQQEKKNVPEITQPVVGRMKERLWSKQARSKKKKEEQ-YITAEELLASKQ 178
Query: 311 EEDSEVVHRILDMRGPQVRVYTNLSDLNAEEKAKERDVPMPELQHNVGLIVRLAEAEIQE 370
E++ EVV ++ DMRGPQVRV TNLSDLNAEEKAKE DVPMPELQHNV LIVRLAEA+IQE
Sbjct: 179 EQELEVVQKVYDMRGPQVRVLTNLSDLNAEEKAKENDVPMPELQHNVALIVRLAEADIQE 238
Query: 371 IDRDLRRERETXXXXXXXXXXXXXXXXFQKKQLDGFEKIMDVLDQIGEENTAGTLTLDSL 430
IDRDLRRERET FQKKQLD E+IM VLD++GEENT GTLTLDSL
Sbjct: 239 IDRDLRRERETALSLKNEKEKLETETVFQKKQLDNMEEIMSVLDRVGEENTLGTLTLDSL 298
Query: 431 AQCFRELHQKYADNYKLCNLSCIACSYALPLFIRVFQGWDPLRNPSHGLELVSQWKTLLQ 490
AQ FR+L ++ ADNYKLCNLSCIACSYALPLFIRVFQGWDPLRNPSHGLELVSQWK LL+
Sbjct: 299 AQYFRDLLKRSADNYKLCNLSCIACSYALPLFIRVFQGWDPLRNPSHGLELVSQWKALLE 358
Query: 491 GEDCLDIWDDSSPYAQLVSEVVLPAVRISGINTWQARDPEPMLRFLESWEKLLPSSVLAT 550
GED DIWD SSPY QLVSEVVLPAVRISGINTWQARDPEPML FLESWEKLLPSSVLAT
Sbjct: 359 GEDYFDIWDVSSPYTQLVSEVVLPAVRISGINTWQARDPEPMLWFLESWEKLLPSSVLAT 418
Query: 551 ILDNIVMPKLSSAVDTWEPHRETIPIHTWVHPWLPLLGHKLEGIYQVIRFKLSTVLGAWH 610
ILDNIVMPKLSSAVDTWEPHRETIPIHTWVHPWLPLLG+KLEGIYQVIRFKLSTVLGAWH
Sbjct: 419 ILDNIVMPKLSSAVDTWEPHRETIPIHTWVHPWLPLLGNKLEGIYQVIRFKLSTVLGAWH 478
Query: 611 PSDGSAYAILSPWKTVFDSVSWEQLMLRFIVPKLQLVLQEFQVNPANQNLDHFYWVMNWA 670
PSDGSAYAILSPWKTVFDS SWEQLMLRFIVPKLQLVLQEFQVNPA+QN+D FYWVMNWA
Sbjct: 479 PSDGSAYAILSPWKTVFDSASWEQLMLRFIVPKLQLVLQEFQVNPASQNIDQFYWVMNWA 538
Query: 671 SAIPIHLMADMMEKFFFSKWLQVLYHWLCSNPNFEEVTKWYLGWKELIPKELLANESIRF 730
SAIPIHLM DMM+KFFF+KWLQVLYHWLCSNPNFEEVTKWYLGWKELIPKELLANESIR+
Sbjct: 539 SAIPIHLMVDMMDKFFFAKWLQVLYHWLCSNPNFEEVTKWYLGWKELIPKELLANESIRY 598
Query: 731 QLNRGLGMMNQAVEGMEVVQPGLKENISYLRVLEQRQFE-XXXXXXXXXXXXXXSLGGAV 789
QLNRGL MMNQAVEGMEVVQPGLKENISYLRVLEQRQFE SLGGAV
Sbjct: 599 QLNRGLDMMNQAVEGMEVVQPGLKENISYLRVLEQRQFEAQQKAAAYTQQQAAASLGGAV 658
Query: 790 NADGAHELSLKEVIEAHAQQHGLLFKLKPGRMHNGHQIYGFGNVSIIIDSLNQKVYAQNE 849
NADGAHELSLKEVIEAHAQQHGLLFK+KPGRMHNGHQIYGFGNVSIIIDSLNQKVYAQNE
Sbjct: 659 NADGAHELSLKEVIEAHAQQHGLLFKIKPGRMHNGHQIYGFGNVSIIIDSLNQKVYAQNE 718
Query: 850 ETWSLESLQGLVALHHKSLGKRR 872
E WSLESL GL+ LH+KSL KRR
Sbjct: 719 EMWSLESLHGLLELHNKSLSKRR 741
>Glyma02g08060.1
Length = 719
Score = 1085 bits (2807), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/718 (76%), Positives = 575/718 (80%), Gaps = 29/718 (4%)
Query: 156 FLPTAFGKMIKEGAXXXXXXXXXXXXXXXXGDRQGAAGQDVSGDVGKFEKHTKGIGMKLL 215
FLPTAFGK IKEGA G Q GIG+KLL
Sbjct: 30 FLPTAFGKKIKEGAMRREKERERERLEKKRGKHQSV-----------------GIGLKLL 72
Query: 216 ERMGYKGGGLGKNEQGILKPIEARLRAKNSGLGFNNETPAAPLPALQVESQSVSEAAQPT 275
E+MGYKGGGLGKNEQGI+ PIEA+LRAKNSG+GFN LP +Q E ++V E QP
Sbjct: 73 EKMGYKGGGLGKNEQGIVAPIEAKLRAKNSGIGFNESKETMLLPVVQQEKKNVPEITQPV 132
Query: 276 VGRTXXXXXXXXXXXXXXXXXXXYVTAEQLLASKQEEDSEVVHRILDMRGPQVRVYTNLS 335
VGRT Y+TAE+LLASKQE++ EVV ++ DMRGPQVRV TNLS
Sbjct: 133 VGRTKERLWSKQARSKKKKEEQ-YITAEELLASKQEQELEVVQKVYDMRGPQVRVLTNLS 191
Query: 336 DLNAEEKAKERDVPMPELQHNVGLIVRLAEAEIQEIDRDLRRERETXXXXXXXXXXXXXX 395
DLNAEEKAKE DVPMPELQHNV LIVRLAEA+IQEIDRDLRRERET
Sbjct: 192 DLNAEEKAKENDVPMPELQHNVALIVRLAEADIQEIDRDLRRERETALSLKNEKEKLETE 251
Query: 396 XXFQKKQLDGFEKIMDVLDQIGEENTAGTLTLDSLAQCFRELHQKYADNYKLCNLSCIAC 455
FQKKQLD E+IM VLD++GEENT GTLTLDSLAQ FR+L ++ ADNYKLCNLSCIAC
Sbjct: 252 AAFQKKQLDSMEEIMSVLDRVGEENTLGTLTLDSLAQYFRDLRKRSADNYKLCNLSCIAC 311
Query: 456 SYALPLFIRVFQGWDPLRNPSHGLELVSQWKTLLQGEDCLDIWDDSSPYAQLVSEVVLPA 515
SYALPL IRVFQGWDPLRNPSHGLELVSQWK LL+GED +DIWD SSPY QLVSEVVLPA
Sbjct: 312 SYALPLLIRVFQGWDPLRNPSHGLELVSQWKALLEGEDYVDIWDVSSPYTQLVSEVVLPA 371
Query: 516 VRISGINTWQARDPEPMLRFLESWEKLLPSSVLATILDNIVMPKLSSAVDTWEPHRETIP 575
VRISGINTWQARDPEPML FLESWEKLLPSSVLATILDNIVMPKLSSAVDTWEPHRETIP
Sbjct: 372 VRISGINTWQARDPEPMLWFLESWEKLLPSSVLATILDNIVMPKLSSAVDTWEPHRETIP 431
Query: 576 IHTWVHPWLPLLGHKLEGIYQVIRFKLSTVLGAWHPSDGSAYAILSPWKTVFDSVSWEQL 635
IHTWVHPWLPLLGHKLEGIYQVIRFKLSTVLGAWHPSDGSAYAILSPWKTVFDS SWEQL
Sbjct: 432 IHTWVHPWLPLLGHKLEGIYQVIRFKLSTVLGAWHPSDGSAYAILSPWKTVFDSASWEQL 491
Query: 636 MLRFIVPKLQLVLQEFQVNPANQNLDHFYWVMNWASAIPIHLMADMMEKFFFSKWLQVLY 695
MLRFIVPKLQLVLQEFQVNPA+QNLD FYWV NWASAIPIHLM DMMEKFFF+KWLQVLY
Sbjct: 492 MLRFIVPKLQLVLQEFQVNPASQNLDQFYWVTNWASAIPIHLMVDMMEKFFFAKWLQVLY 551
Query: 696 HWLCSNPNFEEVTKWYLGWKELIPKELLANESIRFQLNRGLGMMNQAVEGMEVVQPGLKE 755
HWLCSNPNFEE K KELLANESIR+QLNRGL MMNQAVEGMEVVQPGLKE
Sbjct: 552 HWLCSNPNFEENLK----------KELLANESIRYQLNRGLDMMNQAVEGMEVVQPGLKE 601
Query: 756 NISYLRVLEQRQFE-XXXXXXXXXXXXXXSLGGAVNADGAHELSLKEVIEAHAQQHGLLF 814
NISYLRVLEQRQFE SLGGAVN DGAHELSLKEVIEAHAQQHGLLF
Sbjct: 602 NISYLRVLEQRQFEAQQKAAAYAQQQAAASLGGAVNTDGAHELSLKEVIEAHAQQHGLLF 661
Query: 815 KLKPGRMHNGHQIYGFGNVSIIIDSLNQKVYAQNEETWSLESLQGLVALHHKSLGKRR 872
K+KPGRMHNGHQIYGFGNVSIIIDS NQKVYAQNEETWSLESLQGL+ LH+KSL KRR
Sbjct: 662 KIKPGRMHNGHQIYGFGNVSIIIDSQNQKVYAQNEETWSLESLQGLLELHNKSLSKRR 719
>Glyma18g03590.1
Length = 356
Score = 346 bits (887), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 175/250 (70%), Positives = 199/250 (79%), Gaps = 11/250 (4%)
Query: 440 KYADNYKLCNLSCIACS-YALPLFIRVFQGWDPLRNPSHGLELVSQWKTLLQGE-DCLDI 497
K DNYKLCNLSCIAC YALPLFI+V QGWDPL+NPSHGLELVS+WK LLQ E D +D+
Sbjct: 57 KCVDNYKLCNLSCIACGLYALPLFIKVIQGWDPLQNPSHGLELVSEWKALLQEELDSVDM 116
Query: 498 WDDSSPYAQLVSEVVLPAVRISGINTWQARDPEPMLRFLESWEKLLPSSVLATILDNIVM 557
WD +PY QLVSEVVL A+R S INTWQ +DPEPML FLESW+KLLP+SVLATILDNIVM
Sbjct: 117 WDVLTPYTQLVSEVVLIAIRKSCINTWQVQDPEPMLWFLESWKKLLPASVLATILDNIVM 176
Query: 558 PKLSSAVDTWEPHRETIPIHTWVHPWLPLLGHKLEG-IYQVIRFKLSTVLGAWHPSDGSA 616
PKLSSAVDTWEPHRETIPIHTWVHPWL +G + G ++ V +L+ V+ +
Sbjct: 177 PKLSSAVDTWEPHRETIPIHTWVHPWLTSIGALVGGLLFLVSGTRLTQVMILF-----ML 231
Query: 617 YAILSPWKTVFDSVSWEQLMLRFIVPKLQLVLQEFQVNPANQNLDHFYWVMNWASAIPIH 676
Y +L +FDS SWEQLMLRFIVPKLQLVLQEFQVN ++N+D F WVMNWAS IPIH
Sbjct: 232 YCLLG---RLFDSASWEQLMLRFIVPKLQLVLQEFQVNSESKNVDKFCWVMNWASVIPIH 288
Query: 677 LMADMMEKFF 686
LM MM+KFF
Sbjct: 289 LMVGMMDKFF 298
Score = 103 bits (257), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 48/59 (81%), Positives = 52/59 (88%)
Query: 813 LFKLKPGRMHNGHQIYGFGNVSIIIDSLNQKVYAQNEETWSLESLQGLVALHHKSLGKR 871
FKLKPGRMHNGHQIYGFGNV ID LNQKVYAQ+E+TWSLESLQGL+ LH+KSL KR
Sbjct: 297 FFKLKPGRMHNGHQIYGFGNVGTTIDFLNQKVYAQHEDTWSLESLQGLLELHNKSLSKR 355
>Glyma17g11300.1
Length = 456
Score = 60.8 bits (146), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Query: 193 GQDVSGDVGKFEKHTKGIGMKLLERMGY-KGGGLGKNEQGILKPIEARLRAKNSGLG--- 248
G S ++G FE+HT G G K++ +MGY +G GLGKN QG+ +PIE R K+ GLG
Sbjct: 304 GVTSSANIGSFEEHTTGFGSKMMAKMGYTEGAGLGKNGQGMAQPIEVIQRPKSLGLGVEF 363
Query: 249 FNNETPAAPLPALQVESQSV 268
+NN A + +V ++S+
Sbjct: 364 YNNSAEPARNKSSRVGAKSL 383
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 194 QDVSGDVGKFEKHTKGIGMKLLERMGY-KGGGLGKNEQGILKPIEARLRAKNSGLG 248
++ S VG FEKHTKG G K++ +MG+ +G GLG+ QGI P+ A K+ GLG
Sbjct: 398 RNKSSKVGSFEKHTKGFGSKMMAKMGFVEGNGLGRESQGITTPLSAVRLPKSRGLG 453
>Glyma17g11300.2
Length = 305
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Query: 193 GQDVSGDVGKFEKHTKGIGMKLLERMGY-KGGGLGKNEQGILKPIEARLRAKNSGLG--- 248
G S ++G FE+HT G G K++ +MGY +G GLGKN QG+ +PIE R K+ GLG
Sbjct: 153 GVTSSANIGSFEEHTTGFGSKMMAKMGYTEGAGLGKNGQGMAQPIEVIQRPKSLGLGVEF 212
Query: 249 FNNETPAAPLPALQVESQSV 268
+NN A + +V ++S+
Sbjct: 213 YNNSAEPARNKSSRVGAKSL 232
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 194 QDVSGDVGKFEKHTKGIGMKLLERMGY-KGGGLGKNEQGILKPIEARLRAKNSGLG 248
++ S VG FEKHTKG G K++ +MG+ +G GLG+ QGI P+ A K+ GLG
Sbjct: 247 RNKSSKVGSFEKHTKGFGSKMMAKMGFVEGNGLGRESQGITTPLSAVRLPKSRGLG 302
>Glyma17g11300.3
Length = 423
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Query: 193 GQDVSGDVGKFEKHTKGIGMKLLERMGY-KGGGLGKNEQGILKPIEARLRAKNSGLG--- 248
G S ++G FE+HT G G K++ +MGY +G GLGKN QG+ +PIE R K+ GLG
Sbjct: 271 GVTSSANIGSFEEHTTGFGSKMMAKMGYTEGAGLGKNGQGMAQPIEVIQRPKSLGLGVEF 330
Query: 249 FNNETPAAPLPALQVESQSV 268
+NN A + +V ++S+
Sbjct: 331 YNNSAEPARNKSSRVGAKSL 350
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 194 QDVSGDVGKFEKHTKGIGMKLLERMGY-KGGGLGKNEQGILKPIEARLRAKNSGLG 248
++ S VG FEKHTKG G K++ +MG+ +G GLG+ QGI P+ A K+ GLG
Sbjct: 365 RNKSSKVGSFEKHTKGFGSKMMAKMGFVEGNGLGRESQGITTPLSAVRLPKSRGLG 420
>Glyma13g22490.1
Length = 762
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 43/64 (67%), Gaps = 3/64 (4%)
Query: 193 GQDVSGDVGKFEKHTKGIGMKLLERMGY-KGGGLGKNEQGILKPIEARLRAKNSGLG--F 249
G S ++G FE+HT G G K++ +MGY +G GLGKN QG+ +PIE R K+ GLG F
Sbjct: 610 GVTSSANIGSFEEHTTGFGSKMMAKMGYTEGAGLGKNGQGMAQPIEVIQRPKSLGLGVEF 669
Query: 250 NNET 253
+N +
Sbjct: 670 SNNS 673
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 197 SGDVGKFEKHTKGIGMKLLERMGY-KGGGLGKNEQGILKPIEARLRAKNSGLG 248
S +VG FEKHTKG G K++ +MG+ +G GLG+ QGI P+ A K+ GLG
Sbjct: 707 SSNVGAFEKHTKGFGSKMMAKMGFVEGTGLGRESQGITTPLSAVRLPKSRGLG 759
>Glyma03g38720.1
Length = 304
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 34/46 (73%)
Query: 207 TKGIGMKLLERMGYKGGGLGKNEQGILKPIEARLRAKNSGLGFNNE 252
+ IG KLL++MG+KG GLGK+EQGI++PI++ +R G+G E
Sbjct: 66 SSNIGFKLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPRLGIGKQEE 111
>Glyma19g41310.1
Length = 304
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 34/46 (73%)
Query: 207 TKGIGMKLLERMGYKGGGLGKNEQGILKPIEARLRAKNSGLGFNNE 252
+ IG KLL++MG+KG GLGK+EQGI++PI++ +R G+G E
Sbjct: 66 SSNIGFKLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPRLGVGKQEE 111