Miyakogusa Predicted Gene

Lj1g3v2143300.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2143300.1 tr|G7J4N8|G7J4N8_MEDTR Kinesin-related protein
OS=Medicago truncatula GN=MTR_3g113110 PE=3
SV=1,42.64,0.000000000000004,coiled-coil,NULL,
NODE_68614_length_769_cov_8.292588.path2.1
         (189 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g02930.1                                                       107   1e-23

>Glyma04g02930.1 
          Length = 841

 Score =  107 bits (266), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/169 (46%), Positives = 97/169 (57%), Gaps = 29/169 (17%)

Query: 30  DHKTSANTS--TPAFEEEGGNSPTIQVVEEDAKSSRENGHVD---------QDALQQKTQ 78
           +HKT  N +   P  EE GGN+P IQVV  +AKSS  N  ++         Q ALQ KT+
Sbjct: 525 EHKTDVNNTPPIPVSEENGGNTPMIQVVNVNAKSSSGNEPIELTPVAIDNTQGALQGKTE 584

Query: 79  D-LERNNDHLVDLSEKSNGSSESRPHIMTAMPSPQTHKMSQDASLHPQVSKVEEQNVSPS 137
           + L+   D  VD+++KSNGSSES   I  AM  PQ  K   + S HPQ+S   EQN SP 
Sbjct: 585 ESLQNTKDLAVDITKKSNGSSESESRISNAMSPPQIDK---ETSTHPQISSNLEQNESP- 640

Query: 138 RFSKLDQESASPHQFDEDDLKTMSPLFLDKQELKTRSPPQLEELDSFTL 186
           RF+KLDQESASP +              D QELKT  PPQL++ DS +L
Sbjct: 641 RFNKLDQESASPPR-------------CDVQELKTTLPPQLDKPDSTSL 676