Miyakogusa Predicted Gene

Lj1g3v2141080.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2141080.1 tr|D0TZ45|D0TZ45_STYJA MADS-domain transcription
factor (Fragment) OS=Styrax japonicus GN=TM6 PE=3
S,45.71,2e-19,coiled-coil,NULL; K-box,Transcription factor, K-box;
AGL97, DNA BINDING / TRANSCRIPTION FACTOR,NULL;,CUFF.28630.1
         (112 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g02980.1                                                       198   1e-51
Glyma06g02990.1                                                       197   2e-51
Glyma11g07820.2                                                        55   1e-08
Glyma11g07820.1                                                        52   1e-07

>Glyma04g02980.1 
          Length = 227

 Score =  198 bits (504), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 93/112 (83%), Positives = 105/112 (93%), Gaps = 2/112 (1%)

Query: 1   MDELRLLEQEMDNAAKAVRERKYKVITNQIDTQRKKFNNEREVHNRLLRDLDARAENPPY 60
           M++L+LLE+EMD AAK VRERKYKVITNQIDTQRKKFNNE+EVHNRLL DLDA+AE+P +
Sbjct: 118 MEDLKLLEEEMDKAAKVVRERKYKVITNQIDTQRKKFNNEKEVHNRLLHDLDAKAEDPRF 177

Query: 61  ELMDNGGEYESVIGFSNLGPRMFALSLQPSHPNAHNSGGGAGSDLTTYPLLF 112
            L+DNGGEYESVIGFSNLGPRMFALS+QPSHP+AH+  GGAGSDLTTYPLLF
Sbjct: 178 ALIDNGGEYESVIGFSNLGPRMFALSIQPSHPSAHS--GGAGSDLTTYPLLF 227


>Glyma06g02990.1 
          Length = 227

 Score =  197 bits (502), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 94/112 (83%), Positives = 104/112 (92%), Gaps = 2/112 (1%)

Query: 1   MDELRLLEQEMDNAAKAVRERKYKVITNQIDTQRKKFNNEREVHNRLLRDLDARAENPPY 60
           M++L+LLE+EMD AAK VRERKYKVITNQIDTQRKKFNNE+EVHNRLLRDLDARAE+P +
Sbjct: 118 MEDLKLLEEEMDKAAKVVRERKYKVITNQIDTQRKKFNNEKEVHNRLLRDLDARAEDPRF 177

Query: 61  ELMDNGGEYESVIGFSNLGPRMFALSLQPSHPNAHNSGGGAGSDLTTYPLLF 112
            L+DNGGEYESVIGFSNLGPRMFALSLQPSHP+A +  G AGSDLTTYPLLF
Sbjct: 178 ALIDNGGEYESVIGFSNLGPRMFALSLQPSHPSAQS--GAAGSDLTTYPLLF 227


>Glyma11g07820.2 
          Length = 231

 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 58/100 (58%), Gaps = 4/100 (4%)

Query: 3   ELRLLEQEMDNAAKAVRERKYKVITNQIDTQRKKFNNEREVHNRLLRDLDARAENPPYEL 62
           +LR LE+++ ++   +RERK+ VI  + DT RKK  +  +++  LL +L+  A +P + L
Sbjct: 121 QLRTLEEDLVSSIGKIRERKFHVIKTRTDTCRKKVKSLEQMNRDLLFELEKCAIHPQFIL 180

Query: 63  MDNGGEYESVIGFSNLGPRMFALSLQ-PSHPN--AHNSGG 99
            D G E ES +  +N    ++A   Q  SH N  +H+S G
Sbjct: 181 HDEGDE-ESAVALANGASTLYAFCHQHHSHLNLPSHHSHG 219


>Glyma11g07820.1 
          Length = 232

 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 56/100 (56%), Gaps = 3/100 (3%)

Query: 3   ELRLLEQEMDNAAKAVRERKYKVITNQIDTQRKKFNNEREVHNRLLRDLDARAENPPYEL 62
           +LR LE+++ ++   +RERK+ VI  + DT RKK  +  +++  LL +L  +    P  +
Sbjct: 121 QLRTLEEDLVSSIGKIRERKFHVIKTRTDTCRKKVKSLEQMNRDLLFELKEKCAIHPQFI 180

Query: 63  MDNGGEYESVIGFSNLGPRMFALSLQ-PSHPN--AHNSGG 99
           + + G+ ES +  +N    ++A   Q  SH N  +H+S G
Sbjct: 181 LHDEGDEESAVALANGASTLYAFCHQHHSHLNLPSHHSHG 220