Miyakogusa Predicted Gene

Lj1g3v2138380.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2138380.1 Non Chatacterized Hit- tr|C5WWN8|C5WWN8_SORBI
Putative uncharacterized protein Sb01g032790 OS=Sorghu,57.47,3e-19,PUA
domain-like,PUA-like domain; seg,NULL; SUBFAMILY NOT NAMED,NULL; RING
FINGER PROTEIN 127,NULL; L,CUFF.28880.1
         (152 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g03100.1                                                       169   1e-42
Glyma06g03140.1                                                       162   1e-40
Glyma14g07680.1                                                       133   9e-32
Glyma03g22020.1                                                       115   2e-26
Glyma14g25150.1                                                        77   6e-15

>Glyma04g03100.1 
          Length = 285

 Score =  169 bits (427), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 86/133 (64%), Positives = 92/133 (69%), Gaps = 5/133 (3%)

Query: 25  NPTRLSINPNFPSSSTTH-----VLXXXXXXXGGNLTCSASSFSEKHHTDSPRSDDXXXX 79
           NP  LS+NP  P+S         +L          L CSASSFSEKHHT+S  SDD    
Sbjct: 16  NPITLSLNPKSPTSPPQQHFNLDILRHRRRRPNSTLRCSASSFSEKHHTNSSNSDDVVEL 75

Query: 80  XXXXXXXXXXXGAILPLQIFEFRYRIMMHTLLHTDLRFGVIYTDAVTGTAEVGCVGEVIK 139
                      GAILPLQIFEFRYRIMMHTLLHTDLRFG+IYTDAV+GTAEVGCVGEVIK
Sbjct: 76  PLFPLPLVLFPGAILPLQIFEFRYRIMMHTLLHTDLRFGIIYTDAVSGTAEVGCVGEVIK 135

Query: 140 HERLVDDRFFLIC 152
           HERLVDDRFFLIC
Sbjct: 136 HERLVDDRFFLIC 148


>Glyma06g03140.1 
          Length = 283

 Score =  162 bits (410), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 85/132 (64%), Positives = 89/132 (67%), Gaps = 4/132 (3%)

Query: 25  NPTRLSINPNFPSSSTTHV----LXXXXXXXGGNLTCSASSFSEKHHTDSPRSDDXXXXX 80
           NP  LS+NP  P+S   H     L          L CSASSFSEKHHT+S  SDD     
Sbjct: 15  NPITLSLNPKSPTSPPQHFNLDFLRHRRRRPASTLRCSASSFSEKHHTNSSNSDDVLELP 74

Query: 81  XXXXXXXXXXGAILPLQIFEFRYRIMMHTLLHTDLRFGVIYTDAVTGTAEVGCVGEVIKH 140
                     GAILPLQIFEFRYRIMMHTLLHTDLRFGVIY DAV+GTA VGCVGEVIKH
Sbjct: 75  LFPLPLVLFPGAILPLQIFEFRYRIMMHTLLHTDLRFGVIYNDAVSGTANVGCVGEVIKH 134

Query: 141 ERLVDDRFFLIC 152
           E LVDDRFFLIC
Sbjct: 135 ECLVDDRFFLIC 146


>Glyma14g07680.1 
          Length = 272

 Score =  133 bits (334), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 66/96 (68%), Positives = 70/96 (72%), Gaps = 7/96 (7%)

Query: 57  CSASSFSEKHHTDSPRSDDXXXXXXXXXXXXXXXGAILPLQIFEFRYRIMMHTLLHTDLR 116
           CSASS  + H       DD               GAILPLQIFEFRYRIMMHTLLHTDLR
Sbjct: 46  CSASSEKQPH-------DDALELPLFPLPLVLFPGAILPLQIFEFRYRIMMHTLLHTDLR 98

Query: 117 FGVIYTDAVTGTAEVGCVGEVIKHERLVDDRFFLIC 152
           FGVIY DAV+GTAEVGCVGEV+KHERLVDDRFFL+C
Sbjct: 99  FGVIYNDAVSGTAEVGCVGEVVKHERLVDDRFFLVC 134


>Glyma03g22020.1 
          Length = 159

 Score =  115 bits (287), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 52/62 (83%), Positives = 58/62 (93%)

Query: 91  GAILPLQIFEFRYRIMMHTLLHTDLRFGVIYTDAVTGTAEVGCVGEVIKHERLVDDRFFL 150
           GAILPLQIFEFRYRIMMH LLHT+L FGVIY +A++GTAEV CVGEVIKHERLVD+RFFL
Sbjct: 28  GAILPLQIFEFRYRIMMHRLLHTNLCFGVIYNNAISGTAEVSCVGEVIKHERLVDNRFFL 87

Query: 151 IC 152
           +C
Sbjct: 88  VC 89


>Glyma14g25150.1 
          Length = 49

 Score = 77.0 bits (188), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 34/49 (69%), Positives = 42/49 (85%)

Query: 98  IFEFRYRIMMHTLLHTDLRFGVIYTDAVTGTAEVGCVGEVIKHERLVDD 146
           IF+FRY IMMHTLLHT+L FG+IYT+ V GTA + C+ EVIKHERLV++
Sbjct: 1   IFKFRYHIMMHTLLHTNLYFGIIYTNVVLGTANISCIDEVIKHERLVNN 49