Miyakogusa Predicted Gene

Lj1g3v2127290.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2127290.1 tr|B9GRK7|B9GRK7_POPTR Predicted protein
(Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_412109
PE=4,60.98,2e-19,SEC14 CYTOSOLIC FACTOR-RELATED,NULL; SEC14 RELATED
PROTEIN,NULL; coiled-coil,NULL,CUFF.28615.1
         (84 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g03300.1                                                       126   7e-30
Glyma14g07850.2                                                       118   1e-27
Glyma14g07850.3                                                       118   1e-27
Glyma14g07850.1                                                       118   2e-27
Glyma17g37150.1                                                       115   1e-26
Glyma04g03230.1                                                       112   1e-25
Glyma06g01260.1                                                       103   4e-23
Glyma11g12260.1                                                       102   7e-23
Glyma04g01220.1                                                       102   7e-23
Glyma06g01260.2                                                       102   8e-23
Glyma12g04460.1                                                       100   2e-22
Glyma11g07660.1                                                        68   2e-12
Glyma04g01230.1                                                        57   6e-09
Glyma01g37640.1                                                        53   9e-08
Glyma06g01270.1                                                        51   3e-07
Glyma16g24670.1                                                        49   1e-06
Glyma02g05980.1                                                        49   1e-06

>Glyma06g03300.1 
          Length = 587

 Score =  126 bits (316), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 62/79 (78%), Positives = 70/79 (88%)

Query: 3   NLSSSTLERLGELEEKVDMLESKLNAMPHAKEELLNAAIYRVDALEAEQITTKKALHEAL 62
           NL SSTL+RLGELEEKVDML+SK + MPH KEELLNAA+YRVDALEAE I TKKAL+EAL
Sbjct: 504 NLPSSTLKRLGELEEKVDMLQSKPSVMPHEKEELLNAAVYRVDALEAELIATKKALYEAL 563

Query: 63  IKQEELMTYKDNQEKSKFK 81
           I+QEELM Y D+QE+ KFK
Sbjct: 564 IRQEELMAYIDSQERDKFK 582


>Glyma14g07850.2 
          Length = 623

 Score =  118 bits (296), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 58/83 (69%), Positives = 71/83 (85%)

Query: 2   TNLSSSTLERLGELEEKVDMLESKLNAMPHAKEELLNAAIYRVDALEAEQITTKKALHEA 61
           T   SS ++RLGELEEKVDML+SK N MP+ KEELLNAA+YRVDALEAE I TKKAL+EA
Sbjct: 538 TEFISSAMKRLGELEEKVDMLQSKPNVMPYEKEELLNAAVYRVDALEAELIATKKALYEA 597

Query: 62  LIKQEELMTYKDNQEKSKFKTRR 84
           LI+QEEL+ Y D+QE+SKF+ ++
Sbjct: 598 LIRQEELLAYIDSQERSKFEKKK 620


>Glyma14g07850.3 
          Length = 618

 Score =  118 bits (296), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 58/83 (69%), Positives = 71/83 (85%)

Query: 2   TNLSSSTLERLGELEEKVDMLESKLNAMPHAKEELLNAAIYRVDALEAEQITTKKALHEA 61
           T   SS ++RLGELEEKVDML+SK N MP+ KEELLNAA+YRVDALEAE I TKKAL+EA
Sbjct: 533 TEFISSAMKRLGELEEKVDMLQSKPNVMPYEKEELLNAAVYRVDALEAELIATKKALYEA 592

Query: 62  LIKQEELMTYKDNQEKSKFKTRR 84
           LI+QEEL+ Y D+QE+SKF+ ++
Sbjct: 593 LIRQEELLAYIDSQERSKFEKKK 615


>Glyma14g07850.1 
          Length = 630

 Score =  118 bits (295), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 58/79 (73%), Positives = 68/79 (86%)

Query: 2   TNLSSSTLERLGELEEKVDMLESKLNAMPHAKEELLNAAIYRVDALEAEQITTKKALHEA 61
           T   SS ++RLGELEEKVDML+SK N MP+ KEELLNAA+YRVDALEAE I TKKAL+EA
Sbjct: 538 TEFISSAMKRLGELEEKVDMLQSKPNVMPYEKEELLNAAVYRVDALEAELIATKKALYEA 597

Query: 62  LIKQEELMTYKDNQEKSKF 80
           LI+QEEL+ Y D+QE+SKF
Sbjct: 598 LIRQEELLAYIDSQERSKF 616


>Glyma17g37150.1 
          Length = 628

 Score =  115 bits (288), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 57/79 (72%), Positives = 68/79 (86%)

Query: 2   TNLSSSTLERLGELEEKVDMLESKLNAMPHAKEELLNAAIYRVDALEAEQITTKKALHEA 61
           T L SS L+RLGELEEKVD+L+SK N MP+ KEELLNAA+YRVDALEAE I TK+AL+EA
Sbjct: 539 TELISSALKRLGELEEKVDILQSKPNVMPYEKEELLNAAVYRVDALEAELIATKRALYEA 598

Query: 62  LIKQEELMTYKDNQEKSKF 80
           LI+QEEL+ Y D+QE+ KF
Sbjct: 599 LIRQEELLAYIDSQERRKF 617


>Glyma04g03230.1 
          Length = 511

 Score =  112 bits (279), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 54/72 (75%), Positives = 64/72 (88%)

Query: 2   TNLSSSTLERLGELEEKVDMLESKLNAMPHAKEELLNAAIYRVDALEAEQITTKKALHEA 61
           TN+ SSTL+R+GELEEKVDML+SK + MPH KEELL+AA+YRVDALEAE I TKKAL+E+
Sbjct: 439 TNIPSSTLKRIGELEEKVDMLQSKPSVMPHEKEELLDAAVYRVDALEAELIATKKALYES 498

Query: 62  LIKQEELMTYKD 73
           LI+QEELM Y D
Sbjct: 499 LIRQEELMAYID 510


>Glyma06g01260.1 
          Length = 647

 Score =  103 bits (257), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 52/82 (63%), Positives = 67/82 (81%)

Query: 3   NLSSSTLERLGELEEKVDMLESKLNAMPHAKEELLNAAIYRVDALEAEQITTKKALHEAL 62
           NL  S L+RLGELEEKVD L+SK + MP+ KEELLNAA+ RVDALEAE I TKKAL++AL
Sbjct: 539 NLLPSMLKRLGELEEKVDTLQSKPSEMPYEKEELLNAAVCRVDALEAELIATKKALYDAL 598

Query: 63  IKQEELMTYKDNQEKSKFKTRR 84
           ++QEEL+ Y D QE++K + ++
Sbjct: 599 MRQEELLAYIDRQEEAKLRVKK 620


>Glyma11g12260.1 
          Length = 629

 Score =  102 bits (255), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 52/79 (65%), Positives = 66/79 (83%)

Query: 3   NLSSSTLERLGELEEKVDMLESKLNAMPHAKEELLNAAIYRVDALEAEQITTKKALHEAL 62
           NL SS ++RLGELE KVD L+SK + MP+ KEELLNAA+ RVDALEAE I TKKAL+EAL
Sbjct: 546 NLLSSMMKRLGELEVKVDTLQSKPSEMPYEKEELLNAAVCRVDALEAELIATKKALYEAL 605

Query: 63  IKQEELMTYKDNQEKSKFK 81
           ++QEEL+ Y D+QEK++ +
Sbjct: 606 MRQEELLAYIDSQEKARLR 624


>Glyma04g01220.1 
          Length = 624

 Score =  102 bits (255), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 52/82 (63%), Positives = 67/82 (81%)

Query: 3   NLSSSTLERLGELEEKVDMLESKLNAMPHAKEELLNAAIYRVDALEAEQITTKKALHEAL 62
           NL  S L+RLGELEEKVD L+SK + MP+ KEELLNAA+ RVDALEAE I TKKAL++AL
Sbjct: 540 NLLPSMLKRLGELEEKVDTLQSKPSEMPYEKEELLNAAVCRVDALEAELIATKKALYDAL 599

Query: 63  IKQEELMTYKDNQEKSKFKTRR 84
           ++QEEL+ Y D QE++K + ++
Sbjct: 600 MRQEELLAYIDRQEEAKLRKKK 621


>Glyma06g01260.2 
          Length = 623

 Score =  102 bits (255), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 52/82 (63%), Positives = 67/82 (81%)

Query: 3   NLSSSTLERLGELEEKVDMLESKLNAMPHAKEELLNAAIYRVDALEAEQITTKKALHEAL 62
           NL  S L+RLGELEEKVD L+SK + MP+ KEELLNAA+ RVDALEAE I TKKAL++AL
Sbjct: 539 NLLPSMLKRLGELEEKVDTLQSKPSEMPYEKEELLNAAVCRVDALEAELIATKKALYDAL 598

Query: 63  IKQEELMTYKDNQEKSKFKTRR 84
           ++QEEL+ Y D QE++K + ++
Sbjct: 599 MRQEELLAYIDRQEEAKLRKKK 620


>Glyma12g04460.1 
          Length = 629

 Score =  100 bits (250), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 51/79 (64%), Positives = 66/79 (83%)

Query: 3   NLSSSTLERLGELEEKVDMLESKLNAMPHAKEELLNAAIYRVDALEAEQITTKKALHEAL 62
           NL SS ++RLGELE KVD L+SK + MP+ KEELLNAA+ RVDALEAE I TKKAL+EAL
Sbjct: 546 NLLSSMMKRLGELEVKVDTLQSKPSEMPYEKEELLNAAVCRVDALEAELIATKKALYEAL 605

Query: 63  IKQEELMTYKDNQEKSKFK 81
           ++QEEL+ Y D+QE+++ +
Sbjct: 606 MRQEELLAYIDSQEEARLR 624


>Glyma11g07660.1 
          Length = 538

 Score = 67.8 bits (164), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 34/68 (50%), Positives = 48/68 (70%)

Query: 6   SSTLERLGELEEKVDMLESKLNAMPHAKEELLNAAIYRVDALEAEQITTKKALHEALIKQ 65
           S+ ++R+ ELEEK+  + +K  AMP  KE++LNA I R D LE + + TKKAL ++L+KQ
Sbjct: 446 STVMKRMAELEEKIVTINNKPTAMPPEKEQMLNATITRADDLEKQLLATKKALEDSLVKQ 505

Query: 66  EELMTYKD 73
           EEL  Y D
Sbjct: 506 EELSAYLD 513


>Glyma04g01230.1 
          Length = 513

 Score = 56.6 bits (135), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 32/72 (44%), Positives = 47/72 (65%), Gaps = 1/72 (1%)

Query: 7   STLERLGELEEKVDMLESKLNAMPHAKEELLNAAIYRVDALEAEQITTKKALHEALIKQE 66
           + ++R+ ELEEKV +L  +   +PH KEE+LN A+ RV  LE + + TKKAL +AL +Q 
Sbjct: 439 AVMKRMAELEEKVTVLSMR-PVIPHEKEEVLNNALCRVTTLEQDLVATKKALDDALARQV 497

Query: 67  ELMTYKDNQEKS 78
           EL    D ++ S
Sbjct: 498 ELQAQIDKKKNS 509


>Glyma01g37640.1 
          Length = 457

 Score = 52.8 bits (125), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 28/57 (49%), Positives = 38/57 (66%)

Query: 17  EKVDMLESKLNAMPHAKEELLNAAIYRVDALEAEQITTKKALHEALIKQEELMTYKD 73
           EK+  + ++  AMP  KE++LNA I R D LE + + TKKAL  +L+KQEEL  Y D
Sbjct: 380 EKMVTINNQPTAMPPEKEQMLNATITRADDLEKQLLATKKALEASLVKQEELSAYLD 436


>Glyma06g01270.1 
          Length = 573

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 1/60 (1%)

Query: 9   LERLGELEEKVDMLESKLNAMPHAKEELLNAAIYRVDALEAEQITTKKALHEALIKQEEL 68
           ++R+ ELEEKV +L  K   +P  KEE+LN A+ RV  +E + + TKKAL +AL +Q EL
Sbjct: 493 MKRMAELEEKVTILSMK-PVIPPEKEEVLNNALGRVTTIEQDLVATKKALDDALARQVEL 551


>Glyma16g24670.1 
          Length = 487

 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 4/60 (6%)

Query: 1   MTNLSS----STLERLGELEEKVDMLESKLNAMPHAKEELLNAAIYRVDALEAEQITTKK 56
           M N+S+    + ++R+ ELE+++  + ++   MP  KEE+LNAAI R DALE E + TKK
Sbjct: 428 MPNISAQEFMTVMKRMAELEDRMVNMNNQTTCMPPEKEEMLNAAISRADALEQELLATKK 487


>Glyma02g05980.1 
          Length = 504

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 40/60 (66%), Gaps = 4/60 (6%)

Query: 1   MTNLSS----STLERLGELEEKVDMLESKLNAMPHAKEELLNAAIYRVDALEAEQITTKK 56
           M N+S+    + ++R+ ELE+K+  + ++   MP  KEE+LNAAI R DALE E + TKK
Sbjct: 445 MPNISAKEFMTVMKRMAELEDKMVKMNNQTICMPPEKEEMLNAAITRADALEQELLATKK 504