Miyakogusa Predicted Gene

Lj1g3v2126140.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2126140.1 Non Chatacterized Hit- tr|I1JDN0|I1JDN0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.19114 PE,66.67,2e-19,
,CUFF.28573.1
         (128 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g10040.1                                                       100   7e-22
Glyma18g52910.1                                                        85   2e-17
Glyma05g23820.1                                                        67   6e-12

>Glyma02g10040.1 
          Length = 134

 Score = 99.8 bits (247), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 50/75 (66%), Positives = 56/75 (74%), Gaps = 2/75 (2%)

Query: 41  HRRKQTFALQSQRTPSSKANTTYTSLLQFPSIRCCSTLNQKNNINLRTCKNCKTQFDPAL 100
           H  K   ALQSQR  SSK N T      +PSIRCCS+LNQKN+INL+TCKNCKTQFDP+L
Sbjct: 12  HGNKLLLALQSQRITSSKPNNT--CAFTYPSIRCCSSLNQKNSINLKTCKNCKTQFDPSL 69

Query: 101 NHPRAGRFHTAHNGA 115
           NHP A RFHT+H G 
Sbjct: 70  NHPHACRFHTSHFGG 84


>Glyma18g52910.1 
          Length = 103

 Score = 84.7 bits (208), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 41/59 (69%), Positives = 47/59 (79%), Gaps = 1/59 (1%)

Query: 64  TSLLQFPSIRCCSTLNQKNN-INLRTCKNCKTQFDPALNHPRAGRFHTAHNGATPVNAL 121
           T    +PSIRCCS+LNQK++ INL+TCKNCKTQFDPALNHP A RFHTA  G TP + L
Sbjct: 4   TCTFTYPSIRCCSSLNQKSSSINLKTCKNCKTQFDPALNHPLACRFHTARFGVTPTSFL 62


>Glyma05g23820.1 
          Length = 92

 Score = 66.6 bits (161), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 30/40 (75%), Positives = 34/40 (85%)

Query: 82  NNINLRTCKNCKTQFDPALNHPRAGRFHTAHNGATPVNAL 121
           N+INL+TCKNCKTQFDPALNHP A RFHT H G+TP + L
Sbjct: 51  NSINLKTCKNCKTQFDPALNHPLACRFHTTHFGSTPTSFL 90