Miyakogusa Predicted Gene

Lj1g3v2124840.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2124840.1 Non Chatacterized Hit- tr|F6H056|F6H056_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,51.92,0.000000004,seg,NULL,CUFF.28554.1
         (134 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g03320.1                                                        70   4e-13
Glyma06g03390.1                                                        51   3e-07

>Glyma04g03320.1 
          Length = 132

 Score = 70.5 bits (171), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 57/135 (42%), Gaps = 4/135 (2%)

Query: 1   MTEKTLVPIFVLWAFXXXXXXXXXXXSENSKADLDFNGNRTEAMKVRRMIGHDTENHFIR 60
           M+E+TLVPIFV WAF           SENSKADLD NGN TE MK+  MIG+ T+ + IR
Sbjct: 1   MSERTLVPIFVFWAFLTIITPTLILLSENSKADLDSNGNITEGMKLGIMIGY-TQKYSIR 59

Query: 61  TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDELILL 120
           T                                                    DD L L 
Sbjct: 60  T--ASPLAKSEEELALAPAPETLPTPSSGTNTTRVTPTGSMSHHNHTLIGNRTDDGLTLF 117

Query: 121 S-TNVHVQVKQAIIR 134
           S T +HVQVKQA IR
Sbjct: 118 SPTKIHVQVKQAYIR 132


>Glyma06g03390.1 
          Length = 54

 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/40 (60%), Positives = 25/40 (62%)

Query: 1  MTEKTLVPIFVLWAFXXXXXXXXXXXSENSKADLDFNGNR 40
          MTE+TLVPIFV WAF           SENSK DLD NGN 
Sbjct: 10 MTERTLVPIFVFWAFLTIITPTLILLSENSKVDLDPNGNE 49