Miyakogusa Predicted Gene
- Lj1g3v2098300.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2098300.1 Non Chatacterized Hit- tr|D7M6A7|D7M6A7_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,36.7,6e-19,WGG,Pre-rRNA-processing protein TSR2; seg,NULL;
SUBFAMILY NOT NAMED,NULL; UNCHARACTERIZED,NULL,CUFF.28514.1
(244 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma13g23820.1 236 2e-62
Glyma19g01230.5 234 5e-62
Glyma19g01230.4 234 5e-62
Glyma19g01230.3 234 5e-62
Glyma19g01230.2 234 5e-62
Glyma19g01230.1 234 5e-62
Glyma18g29500.1 222 3e-58
Glyma01g44800.1 97 2e-20
Glyma08g38260.1 71 1e-12
>Glyma13g23820.1
Length = 201
Score = 236 bits (601), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/201 (60%), Positives = 150/201 (74%), Gaps = 2/201 (0%)
Query: 1 MEGSKFLQGESKRVFSEGIDLVLNRWSALQTAVENEWGGRDSNLKAHQLAADVLSWFTQS 60
MEGS+ L G+S VF+EGI LVL+RWSAL++AVENEWGGR+S LKA QLA+ +L+WFTQS
Sbjct: 1 MEGSRRLHGQSVGVFNEGICLVLSRWSALRSAVENEWGGRESRLKADQLASGILNWFTQS 60
Query: 61 KEPLYIDDLEAIFDEGMLSLNVEVEDGSIEEVAGNLMAMHDECVEGNFRSIDILREANIK 120
KEPLYIDDLE I D+GMLSLNVEVEDGS+EEVA LM MH+E +EGNF S + LR+AN++
Sbjct: 61 KEPLYIDDLEDILDQGMLSLNVEVEDGSVEEVAEKLMVMHEEFLEGNFSSFEDLRKANLE 120
Query: 121 QAARPRLAQIV-XXXXXXXXXXXXXIIGGDNSSNMDVDIQNFESDMNSVNKPANEPLSKA 179
QA P + QI +I DNSS M++DI +S+MNSVN+P NEPL K
Sbjct: 121 QATLPHVTQIANEDDTDEDGDDDEKMIVDDNSSKMNLDISTSDSNMNSVNRPVNEPLPKV 180
Query: 180 AAEADDGWVAVS-RRSRATCN 199
+ EADDGWV VS RR++ N
Sbjct: 181 SGEADDGWVVVSNRRNKGRKN 201
>Glyma19g01230.5
Length = 201
Score = 234 bits (598), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 121/201 (60%), Positives = 151/201 (75%), Gaps = 2/201 (0%)
Query: 1 MEGSKFLQGESKRVFSEGIDLVLNRWSALQTAVENEWGGRDSNLKAHQLAADVLSWFTQS 60
M+GS+ L G+S VF+EGI LVL+RWSAL++AVENEWGGR+S LKA QLA D+L+WFTQS
Sbjct: 1 MDGSRRLLGQSVGVFNEGICLVLSRWSALRSAVENEWGGRESRLKADQLAGDILTWFTQS 60
Query: 61 KEPLYIDDLEAIFDEGMLSLNVEVEDGSIEEVAGNLMAMHDECVEGNFRSIDILREANIK 120
KEPLYIDDLE I D+GMLSLNVEVEDGS+EEVA LM MH+E +EGNF S + LR+AN++
Sbjct: 61 KEPLYIDDLEDILDQGMLSLNVEVEDGSVEEVAEKLMVMHEEFLEGNFSSFEDLRKANLE 120
Query: 121 QAARPRLAQIV-XXXXXXXXXXXXXIIGGDNSSNMDVDIQNFESDMNSVNKPANEPLSKA 179
QA P + QIV +I DNSSNM+ +I +S+MNSVN+P NEPL K
Sbjct: 121 QATLPHVTQIVNEDDSDEDGDHDEKMIVDDNSSNMNPEISTSDSNMNSVNRPVNEPLPKV 180
Query: 180 AAEADDGWVAVS-RRSRATCN 199
+ +ADDGWV VS +R++ N
Sbjct: 181 SGKADDGWVVVSNKRNKGRKN 201
>Glyma19g01230.4
Length = 201
Score = 234 bits (598), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 121/201 (60%), Positives = 151/201 (75%), Gaps = 2/201 (0%)
Query: 1 MEGSKFLQGESKRVFSEGIDLVLNRWSALQTAVENEWGGRDSNLKAHQLAADVLSWFTQS 60
M+GS+ L G+S VF+EGI LVL+RWSAL++AVENEWGGR+S LKA QLA D+L+WFTQS
Sbjct: 1 MDGSRRLLGQSVGVFNEGICLVLSRWSALRSAVENEWGGRESRLKADQLAGDILTWFTQS 60
Query: 61 KEPLYIDDLEAIFDEGMLSLNVEVEDGSIEEVAGNLMAMHDECVEGNFRSIDILREANIK 120
KEPLYIDDLE I D+GMLSLNVEVEDGS+EEVA LM MH+E +EGNF S + LR+AN++
Sbjct: 61 KEPLYIDDLEDILDQGMLSLNVEVEDGSVEEVAEKLMVMHEEFLEGNFSSFEDLRKANLE 120
Query: 121 QAARPRLAQIV-XXXXXXXXXXXXXIIGGDNSSNMDVDIQNFESDMNSVNKPANEPLSKA 179
QA P + QIV +I DNSSNM+ +I +S+MNSVN+P NEPL K
Sbjct: 121 QATLPHVTQIVNEDDSDEDGDHDEKMIVDDNSSNMNPEISTSDSNMNSVNRPVNEPLPKV 180
Query: 180 AAEADDGWVAVS-RRSRATCN 199
+ +ADDGWV VS +R++ N
Sbjct: 181 SGKADDGWVVVSNKRNKGRKN 201
>Glyma19g01230.3
Length = 201
Score = 234 bits (598), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 121/201 (60%), Positives = 151/201 (75%), Gaps = 2/201 (0%)
Query: 1 MEGSKFLQGESKRVFSEGIDLVLNRWSALQTAVENEWGGRDSNLKAHQLAADVLSWFTQS 60
M+GS+ L G+S VF+EGI LVL+RWSAL++AVENEWGGR+S LKA QLA D+L+WFTQS
Sbjct: 1 MDGSRRLLGQSVGVFNEGICLVLSRWSALRSAVENEWGGRESRLKADQLAGDILTWFTQS 60
Query: 61 KEPLYIDDLEAIFDEGMLSLNVEVEDGSIEEVAGNLMAMHDECVEGNFRSIDILREANIK 120
KEPLYIDDLE I D+GMLSLNVEVEDGS+EEVA LM MH+E +EGNF S + LR+AN++
Sbjct: 61 KEPLYIDDLEDILDQGMLSLNVEVEDGSVEEVAEKLMVMHEEFLEGNFSSFEDLRKANLE 120
Query: 121 QAARPRLAQIV-XXXXXXXXXXXXXIIGGDNSSNMDVDIQNFESDMNSVNKPANEPLSKA 179
QA P + QIV +I DNSSNM+ +I +S+MNSVN+P NEPL K
Sbjct: 121 QATLPHVTQIVNEDDSDEDGDHDEKMIVDDNSSNMNPEISTSDSNMNSVNRPVNEPLPKV 180
Query: 180 AAEADDGWVAVS-RRSRATCN 199
+ +ADDGWV VS +R++ N
Sbjct: 181 SGKADDGWVVVSNKRNKGRKN 201
>Glyma19g01230.2
Length = 201
Score = 234 bits (598), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 121/201 (60%), Positives = 151/201 (75%), Gaps = 2/201 (0%)
Query: 1 MEGSKFLQGESKRVFSEGIDLVLNRWSALQTAVENEWGGRDSNLKAHQLAADVLSWFTQS 60
M+GS+ L G+S VF+EGI LVL+RWSAL++AVENEWGGR+S LKA QLA D+L+WFTQS
Sbjct: 1 MDGSRRLLGQSVGVFNEGICLVLSRWSALRSAVENEWGGRESRLKADQLAGDILTWFTQS 60
Query: 61 KEPLYIDDLEAIFDEGMLSLNVEVEDGSIEEVAGNLMAMHDECVEGNFRSIDILREANIK 120
KEPLYIDDLE I D+GMLSLNVEVEDGS+EEVA LM MH+E +EGNF S + LR+AN++
Sbjct: 61 KEPLYIDDLEDILDQGMLSLNVEVEDGSVEEVAEKLMVMHEEFLEGNFSSFEDLRKANLE 120
Query: 121 QAARPRLAQIV-XXXXXXXXXXXXXIIGGDNSSNMDVDIQNFESDMNSVNKPANEPLSKA 179
QA P + QIV +I DNSSNM+ +I +S+MNSVN+P NEPL K
Sbjct: 121 QATLPHVTQIVNEDDSDEDGDHDEKMIVDDNSSNMNPEISTSDSNMNSVNRPVNEPLPKV 180
Query: 180 AAEADDGWVAVS-RRSRATCN 199
+ +ADDGWV VS +R++ N
Sbjct: 181 SGKADDGWVVVSNKRNKGRKN 201
>Glyma19g01230.1
Length = 201
Score = 234 bits (598), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 121/201 (60%), Positives = 151/201 (75%), Gaps = 2/201 (0%)
Query: 1 MEGSKFLQGESKRVFSEGIDLVLNRWSALQTAVENEWGGRDSNLKAHQLAADVLSWFTQS 60
M+GS+ L G+S VF+EGI LVL+RWSAL++AVENEWGGR+S LKA QLA D+L+WFTQS
Sbjct: 1 MDGSRRLLGQSVGVFNEGICLVLSRWSALRSAVENEWGGRESRLKADQLAGDILTWFTQS 60
Query: 61 KEPLYIDDLEAIFDEGMLSLNVEVEDGSIEEVAGNLMAMHDECVEGNFRSIDILREANIK 120
KEPLYIDDLE I D+GMLSLNVEVEDGS+EEVA LM MH+E +EGNF S + LR+AN++
Sbjct: 61 KEPLYIDDLEDILDQGMLSLNVEVEDGSVEEVAEKLMVMHEEFLEGNFSSFEDLRKANLE 120
Query: 121 QAARPRLAQIV-XXXXXXXXXXXXXIIGGDNSSNMDVDIQNFESDMNSVNKPANEPLSKA 179
QA P + QIV +I DNSSNM+ +I +S+MNSVN+P NEPL K
Sbjct: 121 QATLPHVTQIVNEDDSDEDGDHDEKMIVDDNSSNMNPEISTSDSNMNSVNRPVNEPLPKV 180
Query: 180 AAEADDGWVAVS-RRSRATCN 199
+ +ADDGWV VS +R++ N
Sbjct: 181 SGKADDGWVVVSNKRNKGRKN 201
>Glyma18g29500.1
Length = 203
Score = 222 bits (565), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 120/203 (59%), Positives = 143/203 (70%), Gaps = 4/203 (1%)
Query: 1 MEGSKFLQGESKRVFSEGIDLVLNRWSALQTAVENEWGGRDSNLKAHQLAADVLSWFTQS 60
MEGS+ L+G S VFSEGI LVL RWS L TAVENEWGG +S +KA QLA+D+LSWFTQS
Sbjct: 1 MEGSRRLRGHSIGVFSEGIGLVLFRWSTLLTAVENEWGGHESRVKADQLASDILSWFTQS 60
Query: 61 KEPLYIDDLEAIFDEGMLSLNVEVEDGSIEEVAGNLMAMHDECVEGNFRSIDILREANIK 120
KEPLYIDDLE I D+GMLSLNVEVEDGSIEEVA LM MH+E +E NF S + LR+AN++
Sbjct: 61 KEPLYIDDLEDILDQGMLSLNVEVEDGSIEEVAEKLMVMHEEFLEDNFSSFENLRKANLE 120
Query: 121 QAARPRLAQIVXXXXXXXXXXX---XXIIGGDNSSNMDVDIQNFESDMNSVNKPANEPLS 177
AARP + QIV +I DNSSNM+ + ++ NSVN+ N PL
Sbjct: 121 HAARPPVPQIVNDDEDDTDEDVGNDENMIVDDNSSNMNPETSTSVANTNSVNRSVNGPLP 180
Query: 178 KAAAEADDGWVAVS-RRSRATCN 199
K + EADDGWV VS RR++ N
Sbjct: 181 KVSGEADDGWVVVSNRRNKGRKN 203
>Glyma01g44800.1
Length = 93
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 65/88 (73%), Gaps = 1/88 (1%)
Query: 18 GIDLVLNRWSALQTAVENEWGGRDSNLKAHQLAADVLSWFTQSKEPLYIDDLEAIFDEGM 77
I L+L+ W ALQ AVEN+WGG DS K+HQLAAD+ SW ++S + I+DLE++ E M
Sbjct: 1 SIILLLSHWYALQMAVENQWGGYDSLQKSHQLAADLFSWLSKSNALIPIEDLESLLHECM 60
Query: 78 -LSLNVEVEDGSIEEVAGNLMAMHDECV 104
L+ N E+EDGSIE+VA L+A+H+E +
Sbjct: 61 LLTFNTEIEDGSIEQVAEQLLAIHEEYL 88
>Glyma08g38260.1
Length = 105
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 58/103 (56%), Gaps = 4/103 (3%)
Query: 96 LMAMHDECVEGNFRSIDILREANIKQAARPRLAQIVXXXXXXXXXXXX---XIIGGDNSS 152
+ MH E +EGNF S + LR+AN+ +AARP + QIV +I DNSS
Sbjct: 4 FIFMHGEFLEGNFSSFENLRKANL-EAARPHVPQIVNDDEDDTDEDVDNDENMIVDDNSS 62
Query: 153 NMDVDIQNFESDMNSVNKPANEPLSKAAAEADDGWVAVSRRSR 195
NM+ + ++ NSVN+ NEPL + EADD WV VS R +
Sbjct: 63 NMNPETSTSVANTNSVNRTDNEPLPNVSGEADDEWVVVSNRKK 105