Miyakogusa Predicted Gene
- Lj1g3v2095730.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2095730.1 tr|A9TFK0|A9TFK0_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_144873,36.36,6e-18,seg,NULL; FAMILY NOT
NAMED,NULL,CUFF.28470.1
(313 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma04g09230.1 382 e-106
Glyma06g09360.1 256 2e-68
Glyma05g36070.1 186 2e-47
Glyma05g36070.2 186 2e-47
Glyma11g04290.1 97 2e-20
Glyma01g41140.1 96 5e-20
Glyma08g03550.2 50 4e-06
Glyma08g03550.1 50 4e-06
>Glyma04g09230.1
Length = 1407
Score = 382 bits (980), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/284 (68%), Positives = 210/284 (73%)
Query: 28 DDEFSVTDLDWSVFHQDYSXXXXXXXXXXXXSVSCVDDLGGVGTLDTTCKITEDANLTRG 87
+ E SVTDLDW++FHQDYS SVSCVDDLGGVGTLDTTCKI D NLTR
Sbjct: 6 ERELSVTDLDWNLFHQDYSPPAPPPPPPHPPSVSCVDDLGGVGTLDTTCKIVNDVNLTRD 65
Query: 88 VYIAGEGNFNILPGVRFHCEIPGCWITVNVTGNFSLGSNASIVTGAFELESEYAVFENGS 147
VYIAG+GNFNILPGVRF CEIPGC +TVNVTGNFSLGSN+SIVTGAFE ESE AVF N S
Sbjct: 66 VYIAGKGNFNILPGVRFLCEIPGCMVTVNVTGNFSLGSNSSIVTGAFEFESENAVFGNES 125
Query: 148 VVNTTCMAGDPPPQTSXXXXXXXXXXXXXXXXXXXCLVDTKKLPEDVWGGDAYSWSSLQN 207
VVNTT MAGDPPPQTS CLVDT KLPEDVWGGDAYSW+SLQN
Sbjct: 126 VVNTTGMAGDPPPQTSGTPQGVEGGGGGHGGRGASCLVDTTKLPEDVWGGDAYSWASLQN 185
Query: 208 PSSFGSRGASTSKESEYGGLGGGVVRLTIHKIVEMNASLLAEXXXXXXXXXXXXXXSIYI 267
P SFGSRG STSKES+YGGLGGG+VR+ +H+IVEMNA++LA+ SIYI
Sbjct: 186 PYSFGSRGGSTSKESDYGGLGGGLVRMVVHQIVEMNATVLADGGDGGTKGGGGSGGSIYI 245
Query: 268 KAYRMTGNGIISACXXXXXXXXXXXRVSVDVFSRHDEPKISVHG 311
KAYRMTGNGIISAC RVSVDVFSRHDEPKI VHG
Sbjct: 246 KAYRMTGNGIISACGGNGFAGGGGGRVSVDVFSRHDEPKIYVHG 289
>Glyma06g09360.1
Length = 1271
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 132/199 (66%), Positives = 144/199 (72%)
Query: 113 ITVNVTGNFSLGSNASIVTGAFELESEYAVFENGSVVNTTCMAGDPPPQTSXXXXXXXXX 172
+TVNVTGNFSLGSN+SIVTGAFE E+E AVF N SVVNTT MAGDPPPQTS
Sbjct: 2 VTVNVTGNFSLGSNSSIVTGAFEFEAENAVFGNESVVNTTGMAGDPPPQTSGTPQGVEGG 61
Query: 173 XXXXXXXXXXCLVDTKKLPEDVWGGDAYSWSSLQNPSSFGSRGASTSKESEYGGLGGGVV 232
CLVDT KLPEDVWGGDAYSW+SLQ P SFGSRG STSKES+YGGLGGG+V
Sbjct: 62 GGGHGGRGASCLVDTTKLPEDVWGGDAYSWASLQKPYSFGSRGGSTSKESDYGGLGGGLV 121
Query: 233 RLTIHKIVEMNASLLAEXXXXXXXXXXXXXXSIYIKAYRMTGNGIISACXXXXXXXXXXX 292
R+ +H+IVEMNA++LA+ SIYIKAYRMTGNGIISAC
Sbjct: 122 RMVVHQIVEMNATVLADGADGGTKGGGGSGGSIYIKAYRMTGNGIISACGGNGFAGGGGG 181
Query: 293 RVSVDVFSRHDEPKISVHG 311
RVSVDVFSRHDEPKI VHG
Sbjct: 182 RVSVDVFSRHDEPKIYVHG 200
>Glyma05g36070.1
Length = 1437
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 113/283 (39%), Positives = 149/283 (52%), Gaps = 2/283 (0%)
Query: 31 FSVTDLDWSVFHQDYSXXXXXXXXXXXXSV--SCVDDLGGVGTLDTTCKITEDANLTRGV 88
FS+ D D+ + DY+ +C++ L G G+L TTC + V
Sbjct: 30 FSILDSDFDALYGDYTPPSPPPPPPLPHPPSLTCLEGLNGTGSLTTTCDLNSSLIFNSDV 89
Query: 89 YIAGEGNFNILPGVRFHCEIPGCWITVNVTGNFSLGSNASIVTGAFELESEYAVFENGSV 148
YI G G+ NILPGV C + GC I +NV+ FSL S A+IV G + S A GSV
Sbjct: 90 YIEGNGSLNILPGVNLSCPVSGCVILINVSNEFSLQSGAAIVAGTVLVASRNATLFGGSV 149
Query: 149 VNTTCMAGDPPPQTSXXXXXXXXXXXXXXXXXXXCLVDTKKLPEDVWGGDAYSWSSLQNP 208
+N T +AG PP QTS C+ D KLP+DVWGGDAYSWSSL P
Sbjct: 150 INVTGLAGAPPAQTSGTPSGTQGAGGGHGGRGATCVSDNTKLPDDVWGGDAYSWSSLDEP 209
Query: 209 SSFGSRGASTSKESEYGGLGGGVVRLTIHKIVEMNASLLAEXXXXXXXXXXXXXXSIYIK 268
S+GS+G +TSKE +YGG GGG ++ + ++++ LLA SIY+K
Sbjct: 210 WSYGSKGGTTSKEEKYGGEGGGRIKFAVVDSIDVSGDLLANGGDGGMKGGGGSGGSIYVK 269
Query: 269 AYRMTGNGIISACXXXXXXXXXXXRVSVDVFSRHDEPKISVHG 311
A+R+TG G ISA RVS++VFSRHD K +HG
Sbjct: 270 AHRITGTGTISATGGGGFAGGGGGRVSINVFSRHDNTKFFIHG 312
>Glyma05g36070.2
Length = 1372
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 113/283 (39%), Positives = 149/283 (52%), Gaps = 2/283 (0%)
Query: 31 FSVTDLDWSVFHQDYSXXXXXXXXXXXXSV--SCVDDLGGVGTLDTTCKITEDANLTRGV 88
FS+ D D+ + DY+ +C++ L G G+L TTC + V
Sbjct: 30 FSILDSDFDALYGDYTPPSPPPPPPLPHPPSLTCLEGLNGTGSLTTTCDLNSSLIFNSDV 89
Query: 89 YIAGEGNFNILPGVRFHCEIPGCWITVNVTGNFSLGSNASIVTGAFELESEYAVFENGSV 148
YI G G+ NILPGV C + GC I +NV+ FSL S A+IV G + S A GSV
Sbjct: 90 YIEGNGSLNILPGVNLSCPVSGCVILINVSNEFSLQSGAAIVAGTVLVASRNATLFGGSV 149
Query: 149 VNTTCMAGDPPPQTSXXXXXXXXXXXXXXXXXXXCLVDTKKLPEDVWGGDAYSWSSLQNP 208
+N T +AG PP QTS C+ D KLP+DVWGGDAYSWSSL P
Sbjct: 150 INVTGLAGAPPAQTSGTPSGTQGAGGGHGGRGATCVSDNTKLPDDVWGGDAYSWSSLDEP 209
Query: 209 SSFGSRGASTSKESEYGGLGGGVVRLTIHKIVEMNASLLAEXXXXXXXXXXXXXXSIYIK 268
S+GS+G +TSKE +YGG GGG ++ + ++++ LLA SIY+K
Sbjct: 210 WSYGSKGGTTSKEEKYGGEGGGRIKFAVVDSIDVSGDLLANGGDGGMKGGGGSGGSIYVK 269
Query: 269 AYRMTGNGIISACXXXXXXXXXXXRVSVDVFSRHDEPKISVHG 311
A+R+TG G ISA RVS++VFSRHD K +HG
Sbjct: 270 AHRITGTGTISATGGGGFAGGGGGRVSINVFSRHDNTKFFIHG 312
>Glyma11g04290.1
Length = 1325
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/228 (35%), Positives = 113/228 (49%), Gaps = 4/228 (1%)
Query: 84 LTRGVYIAGEGNFNILPGVRFHCEIPGCWITVNVTGNFSLGSNASIVTGAFELESEYAVF 143
L +YI G GN IL V C + GC ITVNV+GN LG NASIV G+ L +
Sbjct: 5 LKSDIYIYGVGNLEILSDVSLLCPVEGCMITVNVSGNIKLGQNASIVAGSVVLSAANLTM 64
Query: 144 ENGSVVNTTCMAGDPPPQTSXXXXXXXXXXXXXXXXXXXCLVDTKKLPEDVWGGDAYSWS 203
E S ++++ + G PP QTS CL + K WGGD Y+WS
Sbjct: 65 EYNSYIDSSSLGGSPPSQTSGTPVGDDGAGGGHGGRGASCLKNNKT----NWGGDVYAWS 120
Query: 204 SLQNPSSFGSRGASTSKESEYGGLGGGVVRLTIHKIVEMNASLLAEXXXXXXXXXXXXXX 263
+L P S+GS+G S + +YGG GGG V+L + + +N S+ A+
Sbjct: 121 TLSEPWSYGSKGGGKSTKKKYGGNGGGRVKLLVKDNLYVNGSITAKGGDGGSDGGGGSGG 180
Query: 264 SIYIKAYRMTGNGIISACXXXXXXXXXXXRVSVDVFSRHDEPKISVHG 311
SI + A ++ G GII+A R+S+D +S ++ I+VHG
Sbjct: 181 SILVHAVKLKGYGIINAAGGMGWGGGGGGRISLDCYSIQEDFNITVHG 228
>Glyma01g41140.1
Length = 1324
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 99/204 (48%), Gaps = 8/204 (3%)
Query: 108 IPGCWITVNVTGNFSLGSNASIVTGAFELESEYAVFENGSVVNTTCMAGDPPPQTSXXXX 167
+ GC ITVNV+GN LG +ASIV+G+ L + S ++++ + G PP QTS
Sbjct: 1 MEGCMITVNVSGNVKLGQDASIVSGSVVLSAANLTMGYNSYIDSSSLGGSPPSQTSGTPV 60
Query: 168 XXXXXXXXXXXXXXXCLVDTKKLPEDVWGGDAYSWSSLQNPSSFGSRGASTSKESEYGGL 227
CL + K WGGD Y+WS+L P S+GS+G S + +YGG
Sbjct: 61 GNDGAGGGHGGRGASCLKNNKT----NWGGDVYAWSTLSEPWSYGSKGGGKSTKKQYGGN 116
Query: 228 GGGVVRLTIHKIVEMNASLLAEXXXXXXXXXXXXXXSIYIKAYRMTGNGIISACXXXXXX 287
GGG V+L + + +N S+ A+ SI + G GIISA
Sbjct: 117 GGGRVKLLVKDTLYVNGSITAKGGDGGSDGGGGSGGSILCRK----GYGIISAAGGTGWG 172
Query: 288 XXXXXRVSVDVFSRHDEPKISVHG 311
R+S+D +S ++ I+VHG
Sbjct: 173 GGGGGRISLDCYSIQEDLNITVHG 196
>Glyma08g03550.2
Length = 1209
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 29/47 (61%)
Query: 265 IYIKAYRMTGNGIISACXXXXXXXXXXXRVSVDVFSRHDEPKISVHG 311
I++KA+RMTG G ISA RVS++VFSRHD K +HG
Sbjct: 11 IFVKAHRMTGTGTISATGAGGFAGGGGGRVSINVFSRHDSTKFFIHG 57
>Glyma08g03550.1
Length = 1230
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 29/47 (61%)
Query: 265 IYIKAYRMTGNGIISACXXXXXXXXXXXRVSVDVFSRHDEPKISVHG 311
I++KA+RMTG G ISA RVS++VFSRHD K +HG
Sbjct: 11 IFVKAHRMTGTGTISATGAGGFAGGGGGRVSINVFSRHDSTKFFIHG 57