Miyakogusa Predicted Gene
- Lj1g3v2095670.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2095670.1 Non Chatacterized Hit- tr|B9R6S8|B9R6S8_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,33.18,0.000000000000008,seg,NULL; coiled-coil,NULL,CUFF.28462.1
(215 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma06g09390.1 135 3e-32
Glyma11g00500.1 61 8e-10
Glyma05g23210.1 53 3e-07
Glyma17g16850.1 53 3e-07
Glyma20g27370.1 49 3e-06
>Glyma06g09390.1
Length = 253
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/209 (47%), Positives = 116/209 (55%), Gaps = 18/209 (8%)
Query: 1 MLKQLPNRNQRTKGSMIKQGFKIFTLIAVIIWLLFQL-NHSLDKRKPNEDNTKVFEKLKA 59
MLKQL NRNQRTKG +K GFKIFTLI V IW+L+QL +SLD+ E + K FE LKA
Sbjct: 1 MLKQLSNRNQRTKGFRVKLGFKIFTLIVVGIWVLYQLRQYSLDE----ERSAKRFENLKA 56
Query: 60 S-HESKKLGRKWFQPWI-NKPYGLMXXXXXXXXXXXXXQSI--GGXXXXXXXXXXXXXXX 115
E+KKLGRK QPW NKPY LM I G
Sbjct: 57 GLDETKKLGRKGLQPWTNNKPYELMDDTEENEHERDDVVVIQDGDKVEEEESEEVEDLID 116
Query: 116 XXXXXXXXXXXXXXXTMSLLEDKGHNEGEKDTY---EKNYKETGASRVVRIRRVTLSLGS 172
MSLLED EGE+DT+ EK+ KE GASRV + RVT SLGS
Sbjct: 117 EQDKEKEEQNEDEEGRMSLLED----EGEEDTHATREKHNKENGASRV--LMRVTKSLGS 170
Query: 173 EFEIGGLRKIKEAVEENSEKIVTEKLQKK 201
EFE GGLRK+KE NS+++ TEK +KK
Sbjct: 171 EFEFGGLRKVKEEEVGNSKRVGTEKQKKK 199
>Glyma11g00500.1
Length = 500
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 1 MLKQLPNRNQRTKGSMIKQGFKIFTLIAVIIWLLFQLNHSLDKRKPNEDN-TKVFEKLKA 59
M+K+ P+RN R+KG +K +I L+ V WL++Q+ HS DK+K E+N KV +
Sbjct: 1 MIKRSPSRNNRSKGIKVKHVLQIILLLGVCFWLIYQVKHSHDKKKEFEENDAKVSVGTQT 60
Query: 60 SHESKKLGRKWFQP 73
++++ KLGRK P
Sbjct: 61 AYQTLKLGRKDLHP 74
>Glyma05g23210.1
Length = 594
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Query: 1 MLKQLPNRNQRTKGSMIKQGFKIFTLIAVIIWLLFQLNHSLDKRKPNEDNTKVFEKLKAS 60
M + P R+QR+KG +K ++ L+ V IWL++QL HS +K+ + E K +
Sbjct: 1 MFRLSPRRSQRSKGFKVKHALQLCVLLGVCIWLIYQLKHSNEKK------SSYVESTKTT 54
Query: 61 HESKKLGRKWFQP 73
E K GRK P
Sbjct: 55 SEVVKFGRKDLHP 67
>Glyma17g16850.1
Length = 638
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 1 MLKQLPNRNQRTKGSMIKQGFKIFTLIAVIIWLLFQLNHSLDKRKPNEDNTKVFEKLKAS 60
M + P R+QR+KG +K ++ L+ V IWL++QL HS +K+ + E K +
Sbjct: 1 MFRLSPRRSQRSKGFKVKHALQLCVLLGVCIWLVYQLKHSKEKK------SSYVESTKTT 54
Query: 61 HESKKLGRKWFQPWI 75
E K GRK P +
Sbjct: 55 SEVVKFGRKDLHPRV 69
>Glyma20g27370.1
Length = 529
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 13/79 (16%)
Query: 1 MLKQLPNRNQRTKGSMIKQGFKIFTLIAVIIWLLFQLNHSLDKRKPNEDNTKVF---EKL 57
M+K+ P+RN R+KG +K +I L+ V WL++Q+ H+ DK+ F KL
Sbjct: 1 MIKRFPSRNNRSKGIKVKHVLQIVLLLGVCFWLIYQVKHNHDKKNE-------FAKDAKL 53
Query: 58 KASHESK---KLGRKWFQP 73
S ++ KLGR+ P
Sbjct: 54 SVSTQTDPILKLGRRDLHP 72