Miyakogusa Predicted Gene

Lj1g3v2069890.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2069890.2 tr|Q6NNL9|Q6NNL9_ARATH At5g11630 OS=Arabidopsis
thaliana GN=At5g11630 PE=4 SV=1,56.04,1e-18,seg,NULL,CUFF.28418.2
         (91 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g09060.3                                                       127   2e-30
Glyma04g08980.1                                                       123   3e-29
Glyma06g09060.2                                                       113   4e-26
Glyma06g09060.1                                                       113   4e-26
Glyma17g15160.1                                                        49   1e-06

>Glyma06g09060.3 
          Length = 91

 Score =  127 bits (320), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 68/91 (74%), Positives = 70/91 (76%)

Query: 1  MASRYRSFSQPAMSLIKSTITKPTTNPKPSPFLFKXXXXXXXXXXVAELGCVQSLLPLHS 60
          MASRYRS SQPA SLIKSTITKP + P PS FL K            ELGC+QSLLPLHS
Sbjct: 1  MASRYRSVSQPAFSLIKSTITKPASKPVPSSFLLKTRSPVTARWVGGELGCLQSLLPLHS 60

Query: 61 AVSSARLTSCLGIDSRTSRSLSQEMGLSTPR 91
          AVSSARLTSCLGIDS  SRSLSQEMGLSTPR
Sbjct: 61 AVSSARLTSCLGIDSSRSRSLSQEMGLSTPR 91


>Glyma04g08980.1 
          Length = 91

 Score =  123 bits (309), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 66/91 (72%), Positives = 70/91 (76%)

Query: 1  MASRYRSFSQPAMSLIKSTITKPTTNPKPSPFLFKXXXXXXXXXXVAELGCVQSLLPLHS 60
          MASRYRS SQPA S+IKSTITKP++   PS FL K            ELGC+QSLLPLHS
Sbjct: 1  MASRYRSVSQPAFSIIKSTITKPSSKLLPSSFLLKTRSPVTARWVGGELGCLQSLLPLHS 60

Query: 61 AVSSARLTSCLGIDSRTSRSLSQEMGLSTPR 91
          AVSSARLTSCLGIDS  SRSLSQEMGLSTPR
Sbjct: 61 AVSSARLTSCLGIDSSRSRSLSQEMGLSTPR 91


>Glyma06g09060.2 
          Length = 93

 Score =  113 bits (283), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 61/85 (71%), Positives = 63/85 (74%)

Query: 1  MASRYRSFSQPAMSLIKSTITKPTTNPKPSPFLFKXXXXXXXXXXVAELGCVQSLLPLHS 60
          MASRYRS SQPA SLIKSTITKP + P PS FL K            ELGC+QSLLPLHS
Sbjct: 1  MASRYRSVSQPAFSLIKSTITKPASKPVPSSFLLKTRSPVTARWVGGELGCLQSLLPLHS 60

Query: 61 AVSSARLTSCLGIDSRTSRSLSQEM 85
          AVSSARLTSCLGIDS  SRSLSQ M
Sbjct: 61 AVSSARLTSCLGIDSSRSRSLSQGM 85


>Glyma06g09060.1 
          Length = 93

 Score =  113 bits (283), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 61/85 (71%), Positives = 63/85 (74%)

Query: 1  MASRYRSFSQPAMSLIKSTITKPTTNPKPSPFLFKXXXXXXXXXXVAELGCVQSLLPLHS 60
          MASRYRS SQPA SLIKSTITKP + P PS FL K            ELGC+QSLLPLHS
Sbjct: 1  MASRYRSVSQPAFSLIKSTITKPASKPVPSSFLLKTRSPVTARWVGGELGCLQSLLPLHS 60

Query: 61 AVSSARLTSCLGIDSRTSRSLSQEM 85
          AVSSARLTSCLGIDS  SRSLSQ M
Sbjct: 61 AVSSARLTSCLGIDSSRSRSLSQGM 85


>Glyma17g15160.1 
          Length = 91

 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/37 (64%), Positives = 31/37 (83%)

Query: 47 AELGCVQSLLPLHSAVSSARLTSCLGIDSRTSRSLSQ 83
          AEL C QS+LPLHSAV++AR+TS L + SR+ R+LSQ
Sbjct: 45 AELRCAQSMLPLHSAVAAARMTSRLSVTSRSCRALSQ 81